RNA–Protein interactions for RNA: ENST00000476143.6

TMCO1-205, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-205ENST00000476143 CCDC171Q6TFL3 1326 aa16.36■□□□□ 0.21
TMCO1-205ENST00000476143 A0A0G2JMZ2 1700 aa16.36■□□□□ 0.21
TMCO1-205ENST00000476143 PLXNB2O15031 1838 aa16.35■□□□□ 0.21
TMCO1-205ENST00000476143 PRKAR2AP13861 404 aaKnown RBP16.35■□□□□ 0.21
TMCO1-205ENST00000476143 TFAP4Q01664 338 aa16.35■□□□□ 0.21
TMCO1-205ENST00000476143 NEDD1Q8NHV4 660 aa16.35■□□□□ 0.21
TMCO1-205ENST00000476143 CEP95Q96GE4 821 aa16.35■□□□□ 0.21
TMCO1-205ENST00000476143 SLF1Q9BQI6 1058 aa16.35■□□□□ 0.21
TMCO1-205ENST00000476143 MOV10L1Q9BXT6 1211 aaKnown RBP16.35■□□□□ 0.21
TMCO1-205ENST00000476143 PAK6Q9NQU5 681 aaPredicted RBP16.35■□□□□ 0.21
TMCO1-205ENST00000476143 MTMR4Q9NYA4 1195 aa16.35■□□□□ 0.21
TMCO1-205ENST00000476143 PPP1R9AQ9ULJ8 1098 aa16.35■□□□□ 0.21
TMCO1-205ENST00000476143 PLIN4Q96Q06 1357 aa16.35■□□□□ 0.21
TMCO1-205ENST00000476143 A0A0D9SFI3 127 aa16.34■□□□□ 0.21
TMCO1-205ENST00000476143 F5H6K3 240 aa16.34■□□□□ 0.21
TMCO1-205ENST00000476143 RANBP6O60518 1105 aaKnown RBP16.34■□□□□ 0.21
TMCO1-205ENST00000476143 ERCC3P19447 782 aa16.34■□□□□ 0.21
TMCO1-205ENST00000476143 SDSP20132 328 aa16.34■□□□□ 0.21
TMCO1-205ENST00000476143 KLRC3Q07444 240 aa16.34■□□□□ 0.21
TMCO1-205ENST00000476143 NMIQ13287 307 aaPredicted RBP16.34■□□□□ 0.21
TMCO1-205ENST00000476143 GRB14Q14449 540 aa16.34■□□□□ 0.21
TMCO1-205ENST00000476143 ALX1Q15699 326 aa16.34■□□□□ 0.21
TMCO1-205ENST00000476143 KIAA1755Q5JYT7 1200 aa16.34■□□□□ 0.21
TMCO1-205ENST00000476143 SHISA4Q96DD7 197 aa16.34■□□□□ 0.21
TMCO1-205ENST00000476143 FAM227BQ96M60 508 aa16.34■□□□□ 0.21
TMCO1-205ENST00000476143 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.34■□□□□ 0.21
TMCO1-205ENST00000476143 STX8Q9UNK0 236 aa16.34■□□□□ 0.21
TMCO1-205ENST00000476143 PARP14Q460N5 1801 aa16.33■□□□□ 0.21
TMCO1-205ENST00000476143 NDUFB10O96000 172 aa16.33■□□□□ 0.2
TMCO1-205ENST00000476143 PCP11498 1178 aaKnown RBP16.33■□□□□ 0.2
TMCO1-205ENST00000476143 FCER1AP12319 257 aa16.33■□□□□ 0.2
TMCO1-205ENST00000476143 IRX6P78412 446 aaPredicted RBP16.33■□□□□ 0.2
TMCO1-205ENST00000476143 FAM47AQ5JRC9 791 aa16.33■□□□□ 0.2
TMCO1-205ENST00000476143 ANKLE1Q8NAG6 615 aa16.33■□□□□ 0.2
TMCO1-205ENST00000476143 USP6NLQ92738 828 aa16.33■□□□□ 0.2
TMCO1-205ENST00000476143 DPF3Q92784 378 aa16.33■□□□□ 0.2
TMCO1-205ENST00000476143 MKL1Q969V6 931 aa16.33■□□□□ 0.2
TMCO1-205ENST00000476143 RNF41Q9H4P4 317 aaPredicted RBP16.33■□□□□ 0.2
TMCO1-205ENST00000476143 ANAPC4Q9UJX5 808 aa16.33■□□□□ 0.2
TMCO1-205ENST00000476143 ZMYM6O95789 1325 aa16.33■□□□□ 0.2
TMCO1-205ENST00000476143 CENPFP49454 3210 aa16.33■□□□□ 0.2
TMCO1-205ENST00000476143 RLFQ13129 1914 aa16.33■□□□□ 0.2
TMCO1-205ENST00000476143 IGKV6D-41A0A0C4DH26 115 aa16.32■□□□□ 0.2
TMCO1-205ENST00000476143 VWA5AO00534 786 aa16.32■□□□□ 0.2
TMCO1-205ENST00000476143 ZBED4O75132 1171 aa16.32■□□□□ 0.2
TMCO1-205ENST00000476143 STAT3P40763 770 aa16.32■□□□□ 0.2
TMCO1-205ENST00000476143 CTDSPL2Q05D32 466 aa16.32■□□□□ 0.2
TMCO1-205ENST00000476143 IKQ13123 557 aaPredicted RBP16.32■□□□□ 0.2
TMCO1-205ENST00000476143 KCTD2Q14681 263 aa16.32■□□□□ 0.2
TMCO1-205ENST00000476143 VPS53Q5VIR6 699 aa16.32■□□□□ 0.2
TMCO1-205ENST00000476143 POTEEQ6S8J3 1075 aa16.32■□□□□ 0.2
TMCO1-205ENST00000476143 ABRAQ8N0Z2 381 aa16.32■□□□□ 0.2
TMCO1-205ENST00000476143 LRRC47Q8N1G4 583 aaKnown RBP16.32■□□□□ 0.2
TMCO1-205ENST00000476143 PRPF38AQ8NAV1 312 aaKnown RBP16.32■□□□□ 0.2
TMCO1-205ENST00000476143 GMCL1P1Q8NEA9 526 aa16.32■□□□□ 0.2
TMCO1-205ENST00000476143 FEM1BQ9UK73 627 aa16.32■□□□□ 0.2
TMCO1-205ENST00000476143 ZNF236Q9UL36 1845 aa16.32■□□□□ 0.2
TMCO1-205ENST00000476143 COL11A1P12107 1806 aaPredicted RBP16.31■□□□□ 0.2
TMCO1-205ENST00000476143 MSCO60682 206 aa16.31■□□□□ 0.2
TMCO1-205ENST00000476143 FGAP02671 866 aa16.31■□□□□ 0.2
TMCO1-205ENST00000476143 HOXC6P09630 235 aa16.31■□□□□ 0.2
TMCO1-205ENST00000476143 FDX1P10109 184 aa16.31■□□□□ 0.2
TMCO1-205ENST00000476143 HSPD1P10809 573 aaKnown RBP16.31■□□□□ 0.2
TMCO1-205ENST00000476143 ADORA2AP29274 412 aa16.31■□□□□ 0.2
TMCO1-205ENST00000476143 TMEM132BQ14DG7 1078 aa16.31■□□□□ 0.2
TMCO1-205ENST00000476143 RRP12Q5JTH9 1297 aaKnown RBP16.31■□□□□ 0.2
TMCO1-205ENST00000476143 SLFN13Q68D06 897 aa16.31■□□□□ 0.2
TMCO1-205ENST00000476143 CWC27Q6UX04 472 aaKnown RBP16.31■□□□□ 0.2
TMCO1-205ENST00000476143 NECAB2Q7Z6G3 386 aa16.31■□□□□ 0.2
TMCO1-205ENST00000476143 RIOX2Q8IUF8 465 aa16.31■□□□□ 0.2
TMCO1-205ENST00000476143 MMP19Q99542 508 aa16.31■□□□□ 0.2
TMCO1-205ENST00000476143 TEX13BQ9BXU2 312 aa16.31■□□□□ 0.2
TMCO1-205ENST00000476143 CRISPLD2Q9H0B8 497 aa16.31■□□□□ 0.2
TMCO1-205ENST00000476143 FBXO28Q9NVF7 368 aa16.31■□□□□ 0.2
TMCO1-205ENST00000476143 NR2E3Q9Y5X4 410 aa16.31■□□□□ 0.2
TMCO1-205ENST00000476143 ORC4O43929 436 aa16.3■□□□□ 0.2
TMCO1-205ENST00000476143 BMP3P12645 472 aa16.3■□□□□ 0.2
TMCO1-205ENST00000476143 CNGA1P29973 690 aa16.3■□□□□ 0.2
TMCO1-205ENST00000476143 SLC1A4P43007 532 aa16.3■□□□□ 0.2
TMCO1-205ENST00000476143 NT5C2P49902 561 aa16.3■□□□□ 0.2
TMCO1-205ENST00000476143 STAT2P52630 851 aa16.3■□□□□ 0.2
TMCO1-205ENST00000476143 CACNB2Q08289 660 aaPredicted RBP16.3■□□□□ 0.2
TMCO1-205ENST00000476143 TRIM32Q13049 653 aa16.3■□□□□ 0.2
TMCO1-205ENST00000476143 CCL14Q16627 93 aa16.3■□□□□ 0.2
TMCO1-205ENST00000476143 MAP3K21Q5TCX8 1036 aa16.3■□□□□ 0.2
TMCO1-205ENST00000476143 MFSD6Q6ZSS7 791 aa16.3■□□□□ 0.2
TMCO1-205ENST00000476143 CHURC1Q8WUH1 139 aa16.3■□□□□ 0.2
TMCO1-205ENST00000476143 KIFC2Q96AC6 838 aa16.3■□□□□ 0.2
TMCO1-205ENST00000476143 NUP88Q99567 741 aaPredicted RBP16.3■□□□□ 0.2
TMCO1-205ENST00000476143 ADAMTS5Q9UNA0 930 aa16.3■□□□□ 0.2
TMCO1-205ENST00000476143 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.3■□□□□ 0.2
TMCO1-205ENST00000476143 ZNF213O14771 459 aa16.29■□□□□ 0.2
TMCO1-205ENST00000476143 SLC4A3P48751 1232 aa16.29■□□□□ 0.2
TMCO1-205ENST00000476143 OLFML2BQ68BL8 750 aa16.29■□□□□ 0.2
TMCO1-205ENST00000476143 SNRNP48Q6IEG0 339 aaKnown RBP16.29■□□□□ 0.2
TMCO1-205ENST00000476143 ZNF589Q86UQ0 364 aaPredicted RBP16.29■□□□□ 0.2
TMCO1-205ENST00000476143 FAM160B2Q86V87 743 aa16.29■□□□□ 0.2
TMCO1-205ENST00000476143 RUFY2Q8WXA3 655 aa16.29■□□□□ 0.2
TMCO1-205ENST00000476143 CTNNA3Q9UI47 895 aa16.29■□□□□ 0.2
TMCO1-205ENST00000476143 CPXCR1Q8N123 301 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms