RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 MRPS27Q92552 414 aaKnown RBP23.54■■□□□ 1.36
ITGA4-207ENST00000476089 TSPY26PQ9H489 355 aa23.54■■□□□ 1.36
ITGA4-207ENST00000476089 NOL7Q9UMY1 257 aaKnown RBP23.54■■□□□ 1.36
ITGA4-207ENST00000476089 CEP131Q9UPN4 1083 aa23.54■■□□□ 1.36
ITGA4-207ENST00000476089 MYH4Q9Y623 1939 aa23.54■■□□□ 1.36
ITGA4-207ENST00000476089 FZD9O00144 591 aa23.54■■□□□ 1.36
ITGA4-207ENST00000476089 WNT10BO00744 389 aa23.54■■□□□ 1.36
ITGA4-207ENST00000476089 NR1I2O75469 434 aa23.54■■□□□ 1.36
ITGA4-207ENST00000476089 SNHG28P0DPA3 235 aa23.54■■□□□ 1.36
ITGA4-207ENST00000476089 HEATR3Q7Z4Q2 680 aa23.54■■□□□ 1.36
ITGA4-207ENST00000476089 FSIP1Q8NA03 581 aa23.54■■□□□ 1.36
ITGA4-207ENST00000476089 ZBED3Q96IU2 234 aaPredicted RBP23.54■■□□□ 1.36
ITGA4-207ENST00000476089 TNMDQ9H2S6 317 aa23.54■■□□□ 1.36
ITGA4-207ENST00000476089 TNNI2P48788 182 aa23.53■■□□□ 1.36
ITGA4-207ENST00000476089 ZNF280AP59817 542 aaPredicted RBP23.53■■□□□ 1.36
ITGA4-207ENST00000476089 CCDC12Q8WUD4 166 aaPredicted RBP23.53■■□□□ 1.36
ITGA4-207ENST00000476089 GPKOWQ92917 476 aaPredicted RBP eCLIP23.53■■□□□ 1.36
ITGA4-207ENST00000476089 GJA3Q9Y6H8 435 aa23.53■■□□□ 1.36
ITGA4-207ENST00000476089 FRMPD2Q68DX3 1309 aaPredicted RBP23.53■■□□□ 1.36
ITGA4-207ENST00000476089 GDF11O95390 407 aa23.52■■□□□ 1.36
ITGA4-207ENST00000476089 EEF2P13639 858 aaKnown RBP23.52■■□□□ 1.36
ITGA4-207ENST00000476089 ICA1Q05084 483 aa23.52■■□□□ 1.36
ITGA4-207ENST00000476089 PTPAQ15257 358 aa23.52■■□□□ 1.36
ITGA4-207ENST00000476089 SLC35G1Q2M3R5 365 aa23.52■■□□□ 1.36
ITGA4-207ENST00000476089 GPATCH4Q5T3I0 446 aaKnown RBP23.52■■□□□ 1.36
ITGA4-207ENST00000476089 GALNT17Q6IS24 598 aa23.52■■□□□ 1.36
ITGA4-207ENST00000476089 DPF2Q92785 391 aa23.52■■□□□ 1.36
ITGA4-207ENST00000476089 MKL1Q969V6 931 aa23.52■■□□□ 1.36
ITGA4-207ENST00000476089 BARHL2Q9NY43 387 aa23.52■■□□□ 1.36
ITGA4-207ENST00000476089 CNTNAP1P78357 1384 aa23.52■■□□□ 1.36
ITGA4-207ENST00000476089 XRCC6P12956 609 aaKnown RBP eCLIP23.52■■□□□ 1.36
ITGA4-207ENST00000476089 VEGFAP15692 232 aaPredicted RBP23.52■■□□□ 1.36
ITGA4-207ENST00000476089 MARCKSP29966 332 aaPredicted RBP23.52■■□□□ 1.36
ITGA4-207ENST00000476089 TOB1P50616 345 aaPredicted RBP23.52■■□□□ 1.36
ITGA4-207ENST00000476089 FAM160A1Q05DH4 1040 aa23.52■■□□□ 1.36
ITGA4-207ENST00000476089 ZNF543Q08ER8 600 aa23.52■■□□□ 1.36
ITGA4-207ENST00000476089 SEPT2Q15019 361 aa23.52■■□□□ 1.36
ITGA4-207ENST00000476089 MAP3K11Q16584 847 aa23.52■■□□□ 1.36
ITGA4-207ENST00000476089 NBPF9Q3BBW0 867 aa23.52■■□□□ 1.36
ITGA4-207ENST00000476089 HOMER1Q86YM7 354 aa23.52■■□□□ 1.36
ITGA4-207ENST00000476089 UBA5Q9GZZ9 404 aa23.52■■□□□ 1.36
ITGA4-207ENST00000476089 CLSTN2Q9H4D0 955 aa23.52■■□□□ 1.36
ITGA4-207ENST00000476089 RIOX1Q9H6W3 641 aa23.52■■□□□ 1.36
ITGA4-207ENST00000476089 VAT1LQ9HCJ6 419 aa23.52■■□□□ 1.36
ITGA4-207ENST00000476089 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.52■■□□□ 1.36
ITGA4-207ENST00000476089 GMPSP49915 693 aaPredicted RBP23.51■■□□□ 1.35
ITGA4-207ENST00000476089 NPY5RQ15761 445 aa23.51■■□□□ 1.35
ITGA4-207ENST00000476089 CCDC96Q2M329 555 aa23.51■■□□□ 1.35
ITGA4-207ENST00000476089 WWC2Q6AWC2 1192 aa23.51■■□□□ 1.35
ITGA4-207ENST00000476089 CPVLQ9H3G5 476 aa23.51■■□□□ 1.35
ITGA4-207ENST00000476089 GPCPD1Q9NPB8 672 aa23.51■■□□□ 1.35
ITGA4-207ENST00000476089 PCDHA4Q9UN74 947 aa23.51■■□□□ 1.35
ITGA4-207ENST00000476089 ATP2B1P20020 1258 aa23.5■■□□□ 1.35
ITGA4-207ENST00000476089 CAMK4Q16566 473 aa23.5■■□□□ 1.35
ITGA4-207ENST00000476089 BLIDQ8IZY5 108 aa23.5■■□□□ 1.35
ITGA4-207ENST00000476089 GOLPH3LQ9H4A5 285 aa23.5■■□□□ 1.35
ITGA4-207ENST00000476089 TRIM75PA6NK02 468 aa23.49■■□□□ 1.35
ITGA4-207ENST00000476089 STXBP3O00186 592 aa23.49■■□□□ 1.35
ITGA4-207ENST00000476089 RAD21O60216 631 aa23.49■■□□□ 1.35
ITGA4-207ENST00000476089 KINO60870 393 aaKnown RBP23.49■■□□□ 1.35
ITGA4-207ENST00000476089 GH2P01242 217 aa23.49■■□□□ 1.35
ITGA4-207ENST00000476089 TNFAIP1Q13829 316 aa23.49■■□□□ 1.35
ITGA4-207ENST00000476089 ARHGAP27Q6ZUM4 889 aa23.49■■□□□ 1.35
ITGA4-207ENST00000476089 MICALL2Q8IY33 904 aa23.49■■□□□ 1.35
ITGA4-207ENST00000476089 TNFRSF25Q93038 417 aa23.49■■□□□ 1.35
ITGA4-207ENST00000476089 TMEM39BQ9GZU3 492 aa23.49■■□□□ 1.35
ITGA4-207ENST00000476089 SHTN1A0MZ66 631 aa23.49■■□□□ 1.35
ITGA4-207ENST00000476089 hCG_1984214I3L0E3 225 aa23.49■■□□□ 1.35
ITGA4-207ENST00000476089 CMA1P23946 247 aa23.49■■□□□ 1.35
ITGA4-207ENST00000476089 PRELPP51888 382 aa23.49■■□□□ 1.35
ITGA4-207ENST00000476089 ZNF713Q8N859 430 aaPredicted RBP23.49■■□□□ 1.35
ITGA4-207ENST00000476089 PIGSQ96S52 555 aa23.49■■□□□ 1.35
ITGA4-207ENST00000476089 CNOT7Q9UIV1 285 aaKnown RBP23.49■■□□□ 1.35
ITGA4-207ENST00000476089 PCDHB6Q9Y5E3 794 aa23.49■■□□□ 1.35
ITGA4-207ENST00000476089 CTAGE5O15320 804 aa23.48■■□□□ 1.35
ITGA4-207ENST00000476089 TBC1D12O60347 775 aa23.48■■□□□ 1.35
ITGA4-207ENST00000476089 CUTAO60888 179 aa23.48■■□□□ 1.35
ITGA4-207ENST00000476089 NAPAP54920 295 aa23.48■■□□□ 1.35
ITGA4-207ENST00000476089 SHROOM1Q2M3G4 852 aaPredicted RBP23.48■■□□□ 1.35
ITGA4-207ENST00000476089 AXDND1Q5T1B0 1012 aaPredicted RBP23.48■■□□□ 1.35
ITGA4-207ENST00000476089 KRI1Q8N9T8 703 aaKnown RBP23.48■■□□□ 1.35
ITGA4-207ENST00000476089 DCAF4Q8WV16 495 aa23.48■■□□□ 1.35
ITGA4-207ENST00000476089 RBSNQ9H1K0 784 aa23.48■■□□□ 1.35
ITGA4-207ENST00000476089 A0A1B0GVL5 298 aa23.47■■□□□ 1.35
ITGA4-207ENST00000476089 BMP15O95972 392 aa23.47■■□□□ 1.35
ITGA4-207ENST00000476089 PIK3AP1Q6ZUJ8 805 aa23.47■■□□□ 1.35
ITGA4-207ENST00000476089 DAGLBQ8NCG7 672 aa23.47■■□□□ 1.35
ITGA4-207ENST00000476089 ENGASEQ8NFI3 743 aa23.47■■□□□ 1.35
ITGA4-207ENST00000476089 FHDC1Q9C0D6 1143 aaPredicted RBP23.47■■□□□ 1.35
ITGA4-207ENST00000476089 SLC1A4P43007 532 aa23.47■■□□□ 1.35
ITGA4-207ENST00000476089 TRAPPC10P48553 1259 aa23.47■■□□□ 1.35
ITGA4-207ENST00000476089 SNW1Q13573 536 aaKnown RBP23.47■■□□□ 1.35
ITGA4-207ENST00000476089 EARS2Q5JPH6 523 aaKnown RBP23.47■■□□□ 1.35
ITGA4-207ENST00000476089 SLFN13Q68D06 897 aa23.47■■□□□ 1.35
ITGA4-207ENST00000476089 FAM205CA6NFA0 338 aa23.46■■□□□ 1.35
ITGA4-207ENST00000476089 CCDC192P0DO97 292 aa23.46■■□□□ 1.35
ITGA4-207ENST00000476089 GNA11P29992 359 aa23.46■■□□□ 1.35
ITGA4-207ENST00000476089 TYW1BQ6NUM6 668 aa23.46■■□□□ 1.35
ITGA4-207ENST00000476089 C6orf50Q9HD87 102 aa23.46■■□□□ 1.35
ITGA4-207ENST00000476089 LMNB1P20700 586 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms