RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 USP48Q86UV5 1035 aa11.26□□□□□ -0.61
ITGA6-210ENST00000475302 MICU3Q86XE3 530 aa11.26□□□□□ -0.61
ITGA6-210ENST00000475302 IQCA1Q86XH1 822 aa11.26□□□□□ -0.61
ITGA6-210ENST00000475302 CRACR2BQ8N4Y2 399 aaPredicted RBP11.26□□□□□ -0.61
ITGA6-210ENST00000475302 SHISA4Q96DD7 197 aa11.26□□□□□ -0.61
ITGA6-210ENST00000475302 PRMT6Q96LA8 375 aaPredicted RBP11.26□□□□□ -0.61
ITGA6-210ENST00000475302 MAP3K14Q99558 947 aa11.26□□□□□ -0.61
ITGA6-210ENST00000475302 EHD4Q9H223 541 aa11.26□□□□□ -0.61
ITGA6-210ENST00000475302 ZSCAN16Q9H4T2 348 aaPredicted RBP11.26□□□□□ -0.61
ITGA6-210ENST00000475302 GJB4Q9NTQ9 266 aa11.26□□□□□ -0.61
ITGA6-210ENST00000475302 ZNRF3Q9ULT6 936 aa11.26□□□□□ -0.61
ITGA6-210ENST00000475302 MYO3BQ8WXR4 1341 aa11.26□□□□□ -0.61
ITGA6-210ENST00000475302 COL2A1P02458 1487 aaPredicted RBP11.25□□□□□ -0.61
ITGA6-210ENST00000475302 GREB1LQ9C091 1923 aaPredicted RBP11.25□□□□□ -0.61
ITGA6-210ENST00000475302 ERICH2A1L162 156 aa11.25□□□□□ -0.61
ITGA6-210ENST00000475302 GOLGA6L22H0YM25 854 aa11.25□□□□□ -0.61
ITGA6-210ENST00000475302 PSMD14O00487 310 aa11.25□□□□□ -0.61
ITGA6-210ENST00000475302 GADD45BO75293 160 aaPredicted RBP11.25□□□□□ -0.61
ITGA6-210ENST00000475302 CDKL5O76039 1030 aa11.25□□□□□ -0.61
ITGA6-210ENST00000475302 SHMT1P34896 483 aa11.25□□□□□ -0.61
ITGA6-210ENST00000475302 CXCL9Q07325 125 aa11.25□□□□□ -0.61
ITGA6-210ENST00000475302 RTN1Q16799 776 aa11.25□□□□□ -0.61
ITGA6-210ENST00000475302 TTC6Q86TZ1 520 aa11.25□□□□□ -0.61
ITGA6-210ENST00000475302 FERMT3Q86UX7 667 aa11.25□□□□□ -0.61
ITGA6-210ENST00000475302 CCDC144CPQ8IYA2 1237 aa11.25□□□□□ -0.61
ITGA6-210ENST00000475302 LARGE2Q8N3Y3 721 aa11.25□□□□□ -0.61
ITGA6-210ENST00000475302 FAM184AQ8NB25 1140 aa11.25□□□□□ -0.61
ITGA6-210ENST00000475302 MTMR14Q8NCE2 650 aa11.25□□□□□ -0.61
ITGA6-210ENST00000475302 PHKBQ93100 1093 aa11.25□□□□□ -0.61
ITGA6-210ENST00000475302 AIFM3Q96NN9 605 aa11.25□□□□□ -0.61
ITGA6-210ENST00000475302 NAP1L2Q9ULW6 460 aaPredicted RBP11.25□□□□□ -0.61
ITGA6-210ENST00000475302 KIF3AQ9Y496 699 aa11.25□□□□□ -0.61
ITGA6-210ENST00000475302 ELP1O95163 1332 aa11.25□□□□□ -0.61
ITGA6-210ENST00000475302 ATRNL1Q5VV63 1379 aa11.25□□□□□ -0.61
ITGA6-210ENST00000475302 TCHHQ07283 1943 aa11.25□□□□□ -0.61
ITGA6-210ENST00000475302 CCDC196A0A1B0GTZ2 297 aa11.24□□□□□ -0.61
ITGA6-210ENST00000475302 CPLX1O14810 134 aa11.24□□□□□ -0.61
ITGA6-210ENST00000475302 CALM1P0DP23 149 aa11.24□□□□□ -0.61
ITGA6-210ENST00000475302 CALM2P0DP24 149 aa11.24□□□□□ -0.61
ITGA6-210ENST00000475302 CALM3P0DP25 149 aa11.24□□□□□ -0.61
ITGA6-210ENST00000475302 GUCY1A2P33402 732 aa11.24□□□□□ -0.61
ITGA6-210ENST00000475302 PKN1Q16512 942 aa11.24□□□□□ -0.61
ITGA6-210ENST00000475302 SLC35G1Q2M3R5 365 aa11.24□□□□□ -0.61
ITGA6-210ENST00000475302 SLC4A8Q2Y0W8 1093 aa11.24□□□□□ -0.61
ITGA6-210ENST00000475302 CCDC178Q5BJE1 867 aa11.24□□□□□ -0.61
ITGA6-210ENST00000475302 IFIT1BQ5T764 474 aaKnown RBP11.24□□□□□ -0.61
ITGA6-210ENST00000475302 OTUD7BQ6GQQ9 843 aa11.24□□□□□ -0.61
ITGA6-210ENST00000475302 SYNE3Q6ZMZ3 975 aa11.24□□□□□ -0.61
ITGA6-210ENST00000475302 TMTC3Q6ZXV5 915 aa11.24□□□□□ -0.61
ITGA6-210ENST00000475302 DNAJC18Q9H819 358 aa11.24□□□□□ -0.61
ITGA6-210ENST00000475302 GDPD2Q9HCC8 539 aa11.24□□□□□ -0.61
ITGA6-210ENST00000475302 PGAP2Q9UHJ9 254 aa11.24□□□□□ -0.61
ITGA6-210ENST00000475302 ARFGEF1Q9Y6D6 1849 aa11.23□□□□□ -0.61
ITGA6-210ENST00000475302 DDTLA6NHG4 134 aaPredicted RBP11.23□□□□□ -0.61
ITGA6-210ENST00000475302 TSPY2A6NKD2 308 aa11.23□□□□□ -0.61
ITGA6-210ENST00000475302 KIF28PB7ZC32 967 aa11.23□□□□□ -0.61
ITGA6-210ENST00000475302 PRPF3O43395 683 aaKnown RBP11.23□□□□□ -0.61
ITGA6-210ENST00000475302 ENTPD3O75355 529 aa11.23□□□□□ -0.61
ITGA6-210ENST00000475302 RAD17O75943 681 aa11.23□□□□□ -0.61
ITGA6-210ENST00000475302 GRM4Q14833 912 aa11.23□□□□□ -0.61
ITGA6-210ENST00000475302 PUS10Q3MIT2 529 aaKnown RBP11.23□□□□□ -0.61
ITGA6-210ENST00000475302 FOXD4L6Q3SYB3 417 aaPredicted RBP11.23□□□□□ -0.61
ITGA6-210ENST00000475302 CFAP100Q494V2 611 aa11.23□□□□□ -0.61
ITGA6-210ENST00000475302 FOXD4L3Q6VB84 417 aaPredicted RBP11.23□□□□□ -0.61
ITGA6-210ENST00000475302 CATIPQ7Z7H3 387 aa11.23□□□□□ -0.61
ITGA6-210ENST00000475302 AMOTL1Q8IY63 956 aa11.23□□□□□ -0.61
ITGA6-210ENST00000475302 ZNF444Q8N0Y2 327 aaPredicted RBP11.23□□□□□ -0.61
ITGA6-210ENST00000475302 AGBL3Q8NEM8 1001 aa11.23□□□□□ -0.61
ITGA6-210ENST00000475302 C8orf76Q96K31 380 aa11.23□□□□□ -0.61
ITGA6-210ENST00000475302 TMEM47Q9BQJ4 181 aa11.23□□□□□ -0.61
ITGA6-210ENST00000475302 ALG1Q9BT22 464 aa11.23□□□□□ -0.61
ITGA6-210ENST00000475302 RNF26Q9BY78 433 aaPredicted RBP11.23□□□□□ -0.61
ITGA6-210ENST00000475302 TAOK3Q9H2K8 898 aa11.23□□□□□ -0.61
ITGA6-210ENST00000475302 MKNK2Q9HBH9 465 aa11.23□□□□□ -0.61
ITGA6-210ENST00000475302 ZNF287Q9HBT7 754 aa11.23□□□□□ -0.61
ITGA6-210ENST00000475302 RBM28Q9NW13 759 aaKnown RBP11.23□□□□□ -0.61
ITGA6-210ENST00000475302 RCOR1Q9UKL0 485 aa11.23□□□□□ -0.61
ITGA6-210ENST00000475302 MYH15Q9Y2K3 1946 aa11.23□□□□□ -0.61
ITGA6-210ENST00000475302 FSD2A1L4K1 749 aa11.22□□□□□ -0.61
ITGA6-210ENST00000475302 PALM3A6NDB9 673 aaPredicted RBP11.22□□□□□ -0.61
ITGA6-210ENST00000475302 H3BQV1 296 aa11.22□□□□□ -0.61
ITGA6-210ENST00000475302 TLL1O43897 1013 aa11.22□□□□□ -0.61
ITGA6-210ENST00000475302 PLEKHA8P1O95397 391 aa11.22□□□□□ -0.61
ITGA6-210ENST00000475302 SLURP2P0DP57 97 aa11.22□□□□□ -0.61
ITGA6-210ENST00000475302 U2AF2P26368 475 aaKnown RBP eCLIP11.22□□□□□ -0.61
ITGA6-210ENST00000475302 CACNB3P54284 484 aa11.22□□□□□ -0.61
ITGA6-210ENST00000475302 KIF23Q02241 960 aaPredicted RBP11.22□□□□□ -0.61
ITGA6-210ENST00000475302 SSRP1Q08945 709 aaKnown RBP11.22□□□□□ -0.61
ITGA6-210ENST00000475302 PICALMQ13492 652 aa11.22□□□□□ -0.61
ITGA6-210ENST00000475302 KRT40Q6A162 431 aa11.22□□□□□ -0.61
ITGA6-210ENST00000475302 ATL3Q6DD88 541 aa11.22□□□□□ -0.61
ITGA6-210ENST00000475302 TATDN1Q6P1N9 297 aa11.22□□□□□ -0.61
ITGA6-210ENST00000475302 CPLX2Q6PUV4 134 aaKnown RBP11.22□□□□□ -0.61
ITGA6-210ENST00000475302 SULF1Q8IWU6 871 aa11.22□□□□□ -0.61
ITGA6-210ENST00000475302 NIM1KQ8IY84 436 aa11.22□□□□□ -0.61
ITGA6-210ENST00000475302 CMTR1Q8N1G2 835 aaKnown RBP11.22□□□□□ -0.61
ITGA6-210ENST00000475302 SRBD1Q8N5C6 995 aaKnown RBP11.22□□□□□ -0.61
ITGA6-210ENST00000475302 NLGN2Q8NFZ4 835 aa11.22□□□□□ -0.61
ITGA6-210ENST00000475302 LEO1Q8WVC0 666 aaPredicted RBP11.22□□□□□ -0.61
ITGA6-210ENST00000475302 DHX36Q9H2U1 1008 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms