RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 TATDN1Q6P1N9 297 aa11.77□□□□□ -0.53
PCCB-213ENST00000475214 METTL16Q86W50 562 aaKnown RBP11.77□□□□□ -0.53
PCCB-213ENST00000475214 NOSTRINQ8IVI9 506 aa11.77□□□□□ -0.53
PCCB-213ENST00000475214 STAG2Q8N3U4 1231 aa11.77□□□□□ -0.53
PCCB-213ENST00000475214 BICD2Q8TD16 824 aa11.77□□□□□ -0.53
PCCB-213ENST00000475214 KCNG4Q8TDN1 519 aa11.77□□□□□ -0.53
PCCB-213ENST00000475214 ZC3H15Q8WU90 426 aaKnown RBP11.77□□□□□ -0.53
PCCB-213ENST00000475214 PHF20Q9BVI0 1012 aa11.77□□□□□ -0.53
PCCB-213ENST00000475214 CLIP2Q9UDT6 1046 aa11.77□□□□□ -0.53
PCCB-213ENST00000475214 MTMR7Q9Y216 660 aa11.77□□□□□ -0.53
PCCB-213ENST00000475214 hCG_1642624A0A1W2PR95 340 aa11.76□□□□□ -0.53
PCCB-213ENST00000475214 CLRN2A0PK11 232 aa11.76□□□□□ -0.53
PCCB-213ENST00000475214 FSD2A1L4K1 749 aa11.76□□□□□ -0.53
PCCB-213ENST00000475214 BTBD18B2RXH4 712 aa11.76□□□□□ -0.53
PCCB-213ENST00000475214 KLRF2D3W0D1 207 aa11.76□□□□□ -0.53
PCCB-213ENST00000475214 KRT2P35908 639 aa11.76□□□□□ -0.53
PCCB-213ENST00000475214 TNNI2P48788 182 aa11.76□□□□□ -0.53
PCCB-213ENST00000475214 NASPP49321 788 aaPredicted RBP11.76□□□□□ -0.53
PCCB-213ENST00000475214 CTCFP49711 727 aaPredicted RBP11.76□□□□□ -0.53
PCCB-213ENST00000475214 ASPRV1Q53RT3 343 aa11.76□□□□□ -0.53
PCCB-213ENST00000475214 LINC00301Q8NCQ3 95 aa11.76□□□□□ -0.53
PCCB-213ENST00000475214 PGBD1Q96JS3 809 aa11.76□□□□□ -0.53
PCCB-213ENST00000475214 CSRNP1Q96S65 589 aa11.76□□□□□ -0.53
PCCB-213ENST00000475214 SPZ1Q9BXG8 430 aa11.76□□□□□ -0.53
PCCB-213ENST00000475214 KANSL2Q9H9L4 492 aa11.76□□□□□ -0.53
PCCB-213ENST00000475214 SH3GLB2Q9NR46 395 aa11.76□□□□□ -0.53
PCCB-213ENST00000475214 VPS54Q9P1Q0 977 aa11.76□□□□□ -0.53
PCCB-213ENST00000475214 HERC5Q9UII4 1024 aaKnown RBP11.76□□□□□ -0.53
PCCB-213ENST00000475214 ABT1Q9ULW3 272 aaKnown RBP11.76□□□□□ -0.53
PCCB-213ENST00000475214 SIPA1L1O43166 1804 aa11.75□□□□□ -0.53
PCCB-213ENST00000475214 RASSF10A6NK89 507 aa11.75□□□□□ -0.53
PCCB-213ENST00000475214 SPTLC2O15270 562 aa11.75□□□□□ -0.53
PCCB-213ENST00000475214 ECE1P42892 770 aa11.75□□□□□ -0.53
PCCB-213ENST00000475214 ME1P48163 572 aa11.75□□□□□ -0.53
PCCB-213ENST00000475214 GMPSP49915 693 aaPredicted RBP11.75□□□□□ -0.53
PCCB-213ENST00000475214 NLRP5P59047 1200 aa11.75□□□□□ -0.53
PCCB-213ENST00000475214 ABCB5Q2M3G0 1257 aa11.75□□□□□ -0.53
PCCB-213ENST00000475214 RILPL1Q5EBL4 403 aa11.75□□□□□ -0.53
PCCB-213ENST00000475214 RBM26Q5T8P6 1007 aaKnown RBP11.75□□□□□ -0.53
PCCB-213ENST00000475214 TMEM179Q6ZVK1 233 aa11.75□□□□□ -0.53
PCCB-213ENST00000475214 FAM83AQ86UY5 434 aa11.75□□□□□ -0.53
PCCB-213ENST00000475214 FAM177A1Q8N128 213 aaPredicted RBP11.75□□□□□ -0.53
PCCB-213ENST00000475214 DPF2Q92785 391 aa11.75□□□□□ -0.53
PCCB-213ENST00000475214 FTOQ9C0B1 505 aaKnown RBP eCLIP11.75□□□□□ -0.53
PCCB-213ENST00000475214 DNAJC18Q9H819 358 aa11.75□□□□□ -0.53
PCCB-213ENST00000475214 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.75□□□□□ -0.53
PCCB-213ENST00000475214 VEZTQ9HBM0 779 aa11.75□□□□□ -0.53
PCCB-213ENST00000475214 CABP5Q9NP86 173 aa11.75□□□□□ -0.53
PCCB-213ENST00000475214 MYOZ2Q9NPC6 264 aa11.75□□□□□ -0.53
PCCB-213ENST00000475214 WBP1LQ9NX94 342 aa11.75□□□□□ -0.53
PCCB-213ENST00000475214 CLIC4Q9Y696 253 aa11.75□□□□□ -0.53
PCCB-213ENST00000475214 PCNTO95613 3336 aa11.75□□□□□ -0.53
PCCB-213ENST00000475214 GREB1LQ9C091 1923 aaPredicted RBP11.74□□□□□ -0.53
PCCB-213ENST00000475214 SYCE3A1L190 88 aa11.74□□□□□ -0.53
PCCB-213ENST00000475214 FAM196BA6NMK8 535 aa11.74□□□□□ -0.53
PCCB-213ENST00000475214 USP17L5A8MUK1 530 aa11.74□□□□□ -0.53
PCCB-213ENST00000475214 GOLGA8HP0CJ92 632 aa11.74□□□□□ -0.53
PCCB-213ENST00000475214 PDHBP11177 359 aa11.74□□□□□ -0.53
PCCB-213ENST00000475214 CALML3P27482 149 aa11.74□□□□□ -0.53
PCCB-213ENST00000475214 MRE11P49959 708 aa11.74□□□□□ -0.53
PCCB-213ENST00000475214 ZNF280AP59817 542 aaPredicted RBP11.74□□□□□ -0.53
PCCB-213ENST00000475214 ATP2B2Q01814 1243 aa11.74□□□□□ -0.53
PCCB-213ENST00000475214 MAP2K1Q02750 393 aaPredicted RBP11.74□□□□□ -0.53
PCCB-213ENST00000475214 SLC39A14Q15043 492 aa11.74□□□□□ -0.53
PCCB-213ENST00000475214 USP17L2Q6R6M4 530 aa11.74□□□□□ -0.53
PCCB-213ENST00000475214 LRSAM1Q6UWE0 723 aa11.74□□□□□ -0.53
PCCB-213ENST00000475214 PPP4R3CPQ6ZMV5 832 aa11.74□□□□□ -0.53
PCCB-213ENST00000475214 LRRC47Q8N1G4 583 aaKnown RBP11.74□□□□□ -0.53
PCCB-213ENST00000475214 CCDC148Q8NFR7 591 aa11.74□□□□□ -0.53
PCCB-213ENST00000475214 PIBF1Q8WXW3 757 aa11.74□□□□□ -0.53
PCCB-213ENST00000475214 RRP36Q96EU6 259 aaKnown RBP11.74□□□□□ -0.53
PCCB-213ENST00000475214 ZBED3Q96IU2 234 aaPredicted RBP11.74□□□□□ -0.53
PCCB-213ENST00000475214 DDX19AQ9NUU7 478 aaKnown RBP11.74□□□□□ -0.53
PCCB-213ENST00000475214 NYAP2Q9P242 653 aa11.74□□□□□ -0.53
PCCB-213ENST00000475214 SEC63Q9UGP8 760 aaKnown RBP11.74□□□□□ -0.53
PCCB-213ENST00000475214 CNOT7Q9UIV1 285 aaKnown RBP11.74□□□□□ -0.53
PCCB-213ENST00000475214 NOL7Q9UMY1 257 aaKnown RBP11.74□□□□□ -0.53
PCCB-213ENST00000475214 A0A1W2PQ27 194 aa11.73□□□□□ -0.53
PCCB-213ENST00000475214 A0A1W2PQ64 194 aa11.73□□□□□ -0.53
PCCB-213ENST00000475214 A0A1W2PQD8 194 aa11.73□□□□□ -0.53
PCCB-213ENST00000475214 WNT10BO00744 389 aa11.73□□□□□ -0.53
PCCB-213ENST00000475214 PPP6R2O75170 966 aa11.73□□□□□ -0.53
PCCB-213ENST00000475214 SNHG28P0DPA3 235 aa11.73□□□□□ -0.53
PCCB-213ENST00000475214 LIG1P18858 919 aa11.73□□□□□ -0.53
PCCB-213ENST00000475214 LBX1P52954 281 aa11.73□□□□□ -0.53
PCCB-213ENST00000475214 NR5A1Q13285 461 aa11.73□□□□□ -0.53
PCCB-213ENST00000475214 GPATCH4Q5T3I0 446 aaKnown RBP11.73□□□□□ -0.53
PCCB-213ENST00000475214 ADALQ6DHV7 355 aa11.73□□□□□ -0.53
PCCB-213ENST00000475214 GALNT17Q6IS24 598 aa11.73□□□□□ -0.53
PCCB-213ENST00000475214 CCDC73Q6ZRK6 1079 aa11.73□□□□□ -0.53
PCCB-213ENST00000475214 CCAR1Q8IX12 1150 aaKnown RBP11.73□□□□□ -0.53
PCCB-213ENST00000475214 OXER1Q8TDS5 423 aa11.73□□□□□ -0.53
PCCB-213ENST00000475214 CCDC12Q8WUD4 166 aaPredicted RBP11.73□□□□□ -0.53
PCCB-213ENST00000475214 MKL1Q969V6 931 aa11.73□□□□□ -0.53
PCCB-213ENST00000475214 NUP62CLQ9H1M0 184 aa11.73□□□□□ -0.53
PCCB-213ENST00000475214 PGAP2Q9UHJ9 254 aa11.73□□□□□ -0.53
PCCB-213ENST00000475214 PCDHA7Q9UN72 937 aa11.73□□□□□ -0.53
PCCB-213ENST00000475214 CEP131Q9UPN4 1083 aa11.73□□□□□ -0.53
PCCB-213ENST00000475214 MYH4Q9Y623 1939 aa11.72□□□□□ -0.53
PCCB-213ENST00000475214 hCG_1984214I3L0E3 225 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms