RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 ZKSCAN2Q63HK3 967 aa19.26■□□□□ 0.67
ITGB1-211ENST00000475184 SAMD1Q6SPF0 538 aaPredicted RBP19.26■□□□□ 0.67
ITGB1-211ENST00000475184 CLEC10AQ8IUN9 316 aa19.26■□□□□ 0.67
ITGB1-211ENST00000475184 SH2D4AQ9H788 454 aa19.26■□□□□ 0.67
ITGB1-211ENST00000475184 ARHGEF10LQ9HCE6 1279 aa19.26■□□□□ 0.67
ITGB1-211ENST00000475184 MYH7P12883 1935 aa19.25■□□□□ 0.67
ITGB1-211ENST00000475184 PDE6AP16499 860 aa19.25■□□□□ 0.67
ITGB1-211ENST00000475184 ICA1Q05084 483 aa19.25■□□□□ 0.67
ITGB1-211ENST00000475184 TMEM132BQ14DG7 1078 aa19.25■□□□□ 0.67
ITGB1-211ENST00000475184 TJAP1Q5JTD0 557 aa19.25■□□□□ 0.67
ITGB1-211ENST00000475184 SLC9C2Q5TAH2 1124 aa19.25■□□□□ 0.67
ITGB1-211ENST00000475184 AACSQ86V21 672 aa19.25■□□□□ 0.67
ITGB1-211ENST00000475184 USP38Q8NB14 1042 aa19.25■□□□□ 0.67
ITGB1-211ENST00000475184 SDR42E1Q8WUS8 393 aa19.25■□□□□ 0.67
ITGB1-211ENST00000475184 MMP19Q99542 508 aa19.25■□□□□ 0.67
ITGB1-211ENST00000475184 TINF2Q9BSI4 451 aa19.25■□□□□ 0.67
ITGB1-211ENST00000475184 VCPKMTQ9H867 229 aa19.25■□□□□ 0.67
ITGB1-211ENST00000475184 DCP1AQ9NPI6 582 aaPredicted RBP19.25■□□□□ 0.67
ITGB1-211ENST00000475184 TMEM39AQ9NV64 488 aa19.25■□□□□ 0.67
ITGB1-211ENST00000475184 SWAP70Q9UH65 585 aa19.25■□□□□ 0.67
ITGB1-211ENST00000475184 TMX2Q9Y320 296 aa19.25■□□□□ 0.67
ITGB1-211ENST00000475184 CHD7Q9P2D1 2997 aa19.24■□□□□ 0.67
ITGB1-211ENST00000475184 WDR46O15213 610 aaKnown RBP19.24■□□□□ 0.67
ITGB1-211ENST00000475184 PGK2P07205 417 aa19.24■□□□□ 0.67
ITGB1-211ENST00000475184 CYP2D6P10635 497 aa19.24■□□□□ 0.67
ITGB1-211ENST00000475184 TAL1P17542 331 aaPredicted RBP19.24■□□□□ 0.67
ITGB1-211ENST00000475184 TTF1Q15361 905 aaPredicted RBP19.24■□□□□ 0.67
ITGB1-211ENST00000475184 SIAH1Q8IUQ4 282 aa19.24■□□□□ 0.67
ITGB1-211ENST00000475184 GBF1Q92538 1859 aa19.23■□□□□ 0.67
ITGB1-211ENST00000475184 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.23■□□□□ 0.67
ITGB1-211ENST00000475184 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.23■□□□□ 0.67
ITGB1-211ENST00000475184 AKR1A1P14550 325 aa19.23■□□□□ 0.67
ITGB1-211ENST00000475184 AKR1B1P15121 316 aa19.23■□□□□ 0.67
ITGB1-211ENST00000475184 KCTD2Q14681 263 aa19.23■□□□□ 0.67
ITGB1-211ENST00000475184 ANKRD33Q7Z3H0 272 aa19.23■□□□□ 0.67
ITGB1-211ENST00000475184 LENG1Q96BZ8 264 aaPredicted RBP19.23■□□□□ 0.67
ITGB1-211ENST00000475184 DYNLL2Q96FJ2 89 aa19.23■□□□□ 0.67
ITGB1-211ENST00000475184 ZNF576Q9H609 170 aa19.23■□□□□ 0.67
ITGB1-211ENST00000475184 DIS3Q9Y2L1 958 aaKnown RBP19.23■□□□□ 0.67
ITGB1-211ENST00000475184 ZNF532Q9HCE3 1301 aa19.23■□□□□ 0.67
ITGB1-211ENST00000475184 ZNF865P0CJ78 1059 aaPredicted RBP19.22■□□□□ 0.67
ITGB1-211ENST00000475184 FAAP100Q0VG06 881 aa19.22■□□□□ 0.67
ITGB1-211ENST00000475184 ZNF792Q3KQV3 632 aa19.22■□□□□ 0.67
ITGB1-211ENST00000475184 ERC1Q8IUD2 1116 aa19.22■□□□□ 0.67
ITGB1-211ENST00000475184 RIOX2Q8IUF8 465 aa19.22■□□□□ 0.67
ITGB1-211ENST00000475184 LCORLQ8N3X6 602 aa19.22■□□□□ 0.67
ITGB1-211ENST00000475184 TOX2Q96NM4 488 aa19.22■□□□□ 0.67
ITGB1-211ENST00000475184 TSEN34Q9BSV6 310 aaKnown RBP19.22■□□□□ 0.67
ITGB1-211ENST00000475184 ADAMTS5Q9UNA0 930 aa19.22■□□□□ 0.67
ITGB1-211ENST00000475184 DCDC2CA8MYV0 355 aa19.21■□□□□ 0.67
ITGB1-211ENST00000475184 TNFRSF10AO00220 468 aa19.21■□□□□ 0.67
ITGB1-211ENST00000475184 ADAMTS4O75173 837 aa19.21■□□□□ 0.67
ITGB1-211ENST00000475184 ACLYP53396 1101 aa19.21■□□□□ 0.67
ITGB1-211ENST00000475184 ITPRIPQ8IWB1 547 aa19.21■□□□□ 0.67
ITGB1-211ENST00000475184 FTSJ3Q8IY81 847 aaKnown RBP19.21■□□□□ 0.67
ITGB1-211ENST00000475184 NUP133Q8WUM0 1156 aa19.21■□□□□ 0.67
ITGB1-211ENST00000475184 TIFAQ96CG3 184 aa19.21■□□□□ 0.67
ITGB1-211ENST00000475184 STARD7Q9NQZ5 370 aa19.21■□□□□ 0.67
ITGB1-211ENST00000475184 FBXO28Q9NVF7 368 aa19.21■□□□□ 0.67
ITGB1-211ENST00000475184 CNPY2Q9Y2B0 182 aa19.21■□□□□ 0.67
ITGB1-211ENST00000475184 EXOC6BQ9Y2D4 811 aa19.21■□□□□ 0.67
ITGB1-211ENST00000475184 REV3LO60673 3130 aa19.21■□□□□ 0.67
ITGB1-211ENST00000475184 TCRBV5S4A2TA0A5A2 114 aa19.2■□□□□ 0.66
ITGB1-211ENST00000475184 STAT3P40763 770 aa19.2■□□□□ 0.66
ITGB1-211ENST00000475184 CCDC17Q96LX7 622 aa19.2■□□□□ 0.66
ITGB1-211ENST00000475184 SYNRGQ9UMZ2 1314 aa19.2■□□□□ 0.66
ITGB1-211ENST00000475184 GREB1LQ9C091 1923 aaPredicted RBP19.19■□□□□ 0.66
ITGB1-211ENST00000475184 VWA5AO00534 786 aa19.19■□□□□ 0.66
ITGB1-211ENST00000475184 TIMP1P01033 207 aa19.19■□□□□ 0.66
ITGB1-211ENST00000475184 COL9A1P20849 921 aa19.19■□□□□ 0.66
ITGB1-211ENST00000475184 COPB2P35606 906 aa19.19■□□□□ 0.66
ITGB1-211ENST00000475184 CEP85Q6P2H3 762 aa19.19■□□□□ 0.66
ITGB1-211ENST00000475184 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.19■□□□□ 0.66
ITGB1-211ENST00000475184 ARMT1Q9H993 441 aa19.19■□□□□ 0.66
ITGB1-211ENST00000475184 TBX21Q9UL17 535 aa19.19■□□□□ 0.66
ITGB1-211ENST00000475184 ZNF214Q9UL59 606 aaPredicted RBP19.19■□□□□ 0.66
ITGB1-211ENST00000475184 PPP1R9AQ9ULJ8 1098 aa19.19■□□□□ 0.66
ITGB1-211ENST00000475184 MYH4Q9Y623 1939 aa19.19■□□□□ 0.66
ITGB1-211ENST00000475184 MOXD2PA6NHM9 499 aa19.18■□□□□ 0.66
ITGB1-211ENST00000475184 GOLIM4O00461 696 aa19.18■□□□□ 0.66
ITGB1-211ENST00000475184 EEF2P13639 858 aaKnown RBP19.18■□□□□ 0.66
ITGB1-211ENST00000475184 GAS2L1Q99501 681 aaPredicted RBP19.18■□□□□ 0.66
ITGB1-211ENST00000475184 DNAJC2Q99543 621 aaKnown RBP19.18■□□□□ 0.66
ITGB1-211ENST00000475184 IL1RAPL2Q9NP60 686 aa19.18■□□□□ 0.66
ITGB1-211ENST00000475184 TRANK1O15050 2925 aa19.18■□□□□ 0.66
ITGB1-211ENST00000475184 RLBP1P12271 317 aa19.17■□□□□ 0.66
ITGB1-211ENST00000475184 CDK8P49336 464 aa19.17■□□□□ 0.66
ITGB1-211ENST00000475184 KCNA10Q16322 511 aa19.17■□□□□ 0.66
ITGB1-211ENST00000475184 MFSD5Q6N075 450 aa19.17■□□□□ 0.66
ITGB1-211ENST00000475184 MSL3Q8N5Y2 521 aaKnown RBP19.17■□□□□ 0.66
ITGB1-211ENST00000475184 KLHDC9Q8NEP7 349 aa19.17■□□□□ 0.66
ITGB1-211ENST00000475184 REPS2Q8NFH8 660 aa19.17■□□□□ 0.66
ITGB1-211ENST00000475184 GOPCQ9HD26 462 aa19.17■□□□□ 0.66
ITGB1-211ENST00000475184 ATP8A2Q9NTI2 1148 aa19.17■□□□□ 0.66
ITGB1-211ENST00000475184 MROH7Q68CQ1 1323 aa19.17■□□□□ 0.66
ITGB1-211ENST00000475184 SYNGAP1Q96PV0 1343 aa19.17■□□□□ 0.66
ITGB1-211ENST00000475184 CYP2D7A0A087X1C5 515 aa19.16■□□□□ 0.66
ITGB1-211ENST00000475184 SMIM22K7EJ46 135 aa19.16■□□□□ 0.66
ITGB1-211ENST00000475184 PRKAB2O43741 272 aa19.16■□□□□ 0.66
ITGB1-211ENST00000475184 MBD4O95243 580 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms