RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 ADCYAP1R1P41586 468 aa18.8■□□□□ 0.6
SRRT-209ENST00000474896 LRRC41Q15345 812 aa18.8■□□□□ 0.6
SRRT-209ENST00000474896 FERMT2Q96AC1 680 aa18.8■□□□□ 0.6
SRRT-209ENST00000474896 FAM161BQ96MY7 647 aa18.8■□□□□ 0.6
SRRT-209ENST00000474896 HAUS7Q99871 368 aa18.8■□□□□ 0.6
SRRT-209ENST00000474896 PRDM5Q9NQX1 630 aaPredicted RBP18.8■□□□□ 0.6
SRRT-209ENST00000474896 DDX19BQ9UMR2 479 aa18.8■□□□□ 0.6
SRRT-209ENST00000474896 SLC4A4Q9Y6R1 1079 aa18.8■□□□□ 0.6
SRRT-209ENST00000474896 SMCHD1A6NHR9 2005 aa18.79■□□□□ 0.6
SRRT-209ENST00000474896 ZNF236Q9UL36 1845 aa18.79■□□□□ 0.6
SRRT-209ENST00000474896 MYH8P13535 1937 aa18.79■□□□□ 0.6
SRRT-209ENST00000474896 UBE3CQ15386 1083 aa18.79■□□□□ 0.6
SRRT-209ENST00000474896 SHHQ15465 462 aa18.79■□□□□ 0.6
SRRT-209ENST00000474896 TRIM60Q495X7 471 aa18.79■□□□□ 0.6
SRRT-209ENST00000474896 C16orf86Q6ZW13 317 aa18.79■□□□□ 0.6
SRRT-209ENST00000474896 DDRGK1Q96HY6 314 aa18.79■□□□□ 0.6
SRRT-209ENST00000474896 MMP19Q99542 508 aa18.79■□□□□ 0.6
SRRT-209ENST00000474896 KANSL2Q9H9L4 492 aa18.79■□□□□ 0.6
SRRT-209ENST00000474896 FBXO28Q9NVF7 368 aa18.79■□□□□ 0.6
SRRT-209ENST00000474896 ADAMTS5Q9UNA0 930 aa18.79■□□□□ 0.6
SRRT-209ENST00000474896 DNAH12Q6ZR08 3092 aa18.79■□□□□ 0.6
SRRT-209ENST00000474896 RAD21O60216 631 aa18.78■□□□□ 0.6
SRRT-209ENST00000474896 PGK2P07205 417 aa18.78■□□□□ 0.6
SRRT-209ENST00000474896 FAM47AQ5JRC9 791 aa18.78■□□□□ 0.6
SRRT-209ENST00000474896 CTR9Q6PD62 1173 aa18.78■□□□□ 0.6
SRRT-209ENST00000474896 BADQ92934 168 aa18.78■□□□□ 0.6
SRRT-209ENST00000474896 GUCD1Q96NT3 240 aa18.78■□□□□ 0.6
SRRT-209ENST00000474896 A0A0G2JMZ2 1700 aa18.77■□□□□ 0.6
SRRT-209ENST00000474896 STAT3P40763 770 aa18.77■□□□□ 0.6
SRRT-209ENST00000474896 SNX17Q15036 470 aa18.77■□□□□ 0.6
SRRT-209ENST00000474896 SH3RF1Q7Z6J0 888 aa18.77■□□□□ 0.6
SRRT-209ENST00000474896 RIOX2Q8IUF8 465 aa18.77■□□□□ 0.6
SRRT-209ENST00000474896 PUS7LQ9H0K6 701 aaKnown RBP18.77■□□□□ 0.6
SRRT-209ENST00000474896 GOPCQ9HD26 462 aa18.77■□□□□ 0.6
SRRT-209ENST00000474896 A0A0C4DFX4 3053 aa18.76■□□□□ 0.59
SRRT-209ENST00000474896 VWA5AO00534 786 aa18.76■□□□□ 0.59
SRRT-209ENST00000474896 KCTD2Q14681 263 aa18.76■□□□□ 0.59
SRRT-209ENST00000474896 ZNF792Q3KQV3 632 aa18.76■□□□□ 0.59
SRRT-209ENST00000474896 C9orf50Q5SZB4 431 aa18.76■□□□□ 0.59
SRRT-209ENST00000474896 FAM83BQ5T0W9 1011 aa18.76■□□□□ 0.59
SRRT-209ENST00000474896 ZSCAN25Q6NSZ9 544 aa18.76■□□□□ 0.59
SRRT-209ENST00000474896 TINF2Q9BSI4 451 aa18.76■□□□□ 0.59
SRRT-209ENST00000474896 XPNPEP3Q9NQH7 507 aa18.76■□□□□ 0.59
SRRT-209ENST00000474896 NRBP1Q9UHY1 535 aa18.76■□□□□ 0.59
SRRT-209ENST00000474896 PPP1R9AQ9ULJ8 1098 aa18.76■□□□□ 0.59
SRRT-209ENST00000474896 TRIM43BA6NCK2 446 aa18.75■□□□□ 0.59
SRRT-209ENST00000474896 RARBP10826 455 aa18.75■□□□□ 0.59
SRRT-209ENST00000474896 TAL1P17542 331 aaPredicted RBP18.75■□□□□ 0.59
SRRT-209ENST00000474896 ZNF697Q5TEC3 545 aa18.75■□□□□ 0.59
SRRT-209ENST00000474896 C1orf53Q5VUE5 145 aa18.75■□□□□ 0.59
SRRT-209ENST00000474896 TRIM43Q96BQ3 446 aaPredicted RBP18.75■□□□□ 0.59
SRRT-209ENST00000474896 CHMP4BQ9H444 224 aaKnown RBP18.75■□□□□ 0.59
SRRT-209ENST00000474896 PDLIM7Q9NR12 457 aa18.75■□□□□ 0.59
SRRT-209ENST00000474896 PHF24Q9UPV7 400 aa18.75■□□□□ 0.59
SRRT-209ENST00000474896 DIS3Q9Y2L1 958 aaKnown RBP18.75■□□□□ 0.59
SRRT-209ENST00000474896 COL11A1P12107 1806 aaPredicted RBP18.74■□□□□ 0.59
SRRT-209ENST00000474896 PARP14Q460N5 1801 aa18.74■□□□□ 0.59
SRRT-209ENST00000474896 SMARCA5O60264 1052 aaPredicted RBP18.74■□□□□ 0.59
SRRT-209ENST00000474896 PGK1P00558 417 aa18.74■□□□□ 0.59
SRRT-209ENST00000474896 TLE2Q04725 743 aa18.74■□□□□ 0.59
SRRT-209ENST00000474896 STK11IPQ8N1F8 1099 aa18.74■□□□□ 0.59
SRRT-209ENST00000474896 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.74■□□□□ 0.59
SRRT-209ENST00000474896 LTBP2Q14767 1821 aa18.74■□□□□ 0.59
SRRT-209ENST00000474896 RNF180Q86T96 592 aa18.73■□□□□ 0.59
SRRT-209ENST00000474896 REPS2Q8NFH8 660 aa18.73■□□□□ 0.59
SRRT-209ENST00000474896 STRBPQ96SI9 672 aaKnown RBP18.73■□□□□ 0.59
SRRT-209ENST00000474896 LRRCC1Q9C099 1032 aa18.73■□□□□ 0.59
SRRT-209ENST00000474896 SEMA6BQ9H3T3 888 aa18.73■□□□□ 0.59
SRRT-209ENST00000474896 ZNF214Q9UL59 606 aaPredicted RBP18.73■□□□□ 0.59
SRRT-209ENST00000474896 TACC3Q9Y6A5 838 aa18.73■□□□□ 0.59
SRRT-209ENST00000474896 ZNF865P0CJ78 1059 aaPredicted RBP18.72■□□□□ 0.59
SRRT-209ENST00000474896 COPB2P35606 906 aa18.72■□□□□ 0.59
SRRT-209ENST00000474896 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.72■□□□□ 0.59
SRRT-209ENST00000474896 NUP88Q99567 741 aaPredicted RBP18.72■□□□□ 0.59
SRRT-209ENST00000474896 MKNK2Q9HBH9 465 aa18.72■□□□□ 0.59
SRRT-209ENST00000474896 ARPP21Q9UBL0 812 aaPredicted RBP18.72■□□□□ 0.59
SRRT-209ENST00000474896 CUL9Q8IWT3 2517 aa18.71■□□□□ 0.59
SRRT-209ENST00000474896 MINDY4BA8MYZ0 360 aa18.71■□□□□ 0.59
SRRT-209ENST00000474896 ITGB8P26012 769 aa18.71■□□□□ 0.59
SRRT-209ENST00000474896 SBK1Q52WX2 424 aa18.71■□□□□ 0.59
SRRT-209ENST00000474896 CDX2Q99626 313 aaPredicted RBP18.71■□□□□ 0.59
SRRT-209ENST00000474896 SLF1Q9BQI6 1058 aa18.71■□□□□ 0.59
SRRT-209ENST00000474896 CNPY2Q9Y2B0 182 aa18.71■□□□□ 0.59
SRRT-209ENST00000474896 MYH7P12883 1935 aa18.7■□□□□ 0.58
SRRT-209ENST00000474896 GSG1L2A8MUP6 293 aa18.7■□□□□ 0.58
SRRT-209ENST00000474896 F5H6K3 240 aa18.7■□□□□ 0.58
SRRT-209ENST00000474896 CLTBP09497 229 aa18.7■□□□□ 0.58
SRRT-209ENST00000474896 AKR1A1P14550 325 aa18.7■□□□□ 0.58
SRRT-209ENST00000474896 RASA1P20936 1047 aa18.7■□□□□ 0.58
SRRT-209ENST00000474896 SLC4A3P48751 1232 aa18.7■□□□□ 0.58
SRRT-209ENST00000474896 KLRC3Q07444 240 aa18.7■□□□□ 0.58
SRRT-209ENST00000474896 LENG1Q96BZ8 264 aaPredicted RBP18.7■□□□□ 0.58
SRRT-209ENST00000474896 DDX11Q96FC9 970 aa18.7■□□□□ 0.58
SRRT-209ENST00000474896 COL25A1Q9BXS0 654 aaPredicted RBP18.7■□□□□ 0.58
SRRT-209ENST00000474896 NYAP2Q9P242 653 aa18.7■□□□□ 0.58
SRRT-209ENST00000474896 PLXNA1Q9UIW2 1896 aa18.7■□□□□ 0.58
SRRT-209ENST00000474896 A0A1W2PQ45 241 aaPredicted RBP18.69■□□□□ 0.58
SRRT-209ENST00000474896 A0A1W2PQY0 241 aa18.69■□□□□ 0.58
SRRT-209ENST00000474896 PQBP1O60828 265 aaKnown RBP18.69■□□□□ 0.58
SRRT-209ENST00000474896 SMAD3P84022 425 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms