RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 VSTM4Q8IW00 320 aa24.07■■□□□ 1.44
SH3D21-202ENST00000474766 GOLGA5Q8TBA6 731 aa24.07■■□□□ 1.44
SH3D21-202ENST00000474766 HSD3B7Q9H2F3 369 aa24.07■■□□□ 1.44
SH3D21-202ENST00000474766 EFCC1Q9HA90 598 aa24.07■■□□□ 1.44
SH3D21-202ENST00000474766 COL1A1P02452 1464 aaPredicted RBP24.07■■□□□ 1.44
SH3D21-202ENST00000474766 GYG1P46976 350 aa24.06■■□□□ 1.44
SH3D21-202ENST00000474766 UBASH3AP57075 661 aa24.06■■□□□ 1.44
SH3D21-202ENST00000474766 ZSCAN26Q16670 478 aa24.06■■□□□ 1.44
SH3D21-202ENST00000474766 RESP18Q5W5W9 173 aa24.06■■□□□ 1.44
SH3D21-202ENST00000474766 TRIM34Q9BYJ4 488 aa24.06■■□□□ 1.44
SH3D21-202ENST00000474766 DBNDD1Q9H9R9 158 aa24.06■■□□□ 1.44
SH3D21-202ENST00000474766 TUBE1Q9UJT0 475 aa24.06■■□□□ 1.44
SH3D21-202ENST00000474766 IQSEC3Q9UPP2 1182 aaPredicted RBP24.06■■□□□ 1.44
SH3D21-202ENST00000474766 MAGEB6P1A0A0J9YX57 407 aa24.06■■□□□ 1.44
SH3D21-202ENST00000474766 ERICH2A1L162 156 aa24.06■■□□□ 1.44
SH3D21-202ENST00000474766 FANCGO15287 622 aa24.06■■□□□ 1.44
SH3D21-202ENST00000474766 SEC31AO94979 1220 aaKnown RBP24.06■■□□□ 1.44
SH3D21-202ENST00000474766 MMP1P03956 469 aa24.06■■□□□ 1.44
SH3D21-202ENST00000474766 SYKP43405 635 aa24.06■■□□□ 1.44
SH3D21-202ENST00000474766 DOK7Q18PE1 504 aa24.06■■□□□ 1.44
SH3D21-202ENST00000474766 NOSTRINQ8IVI9 506 aa24.06■■□□□ 1.44
SH3D21-202ENST00000474766 ZKSCAN3Q9BRR0 538 aa24.06■■□□□ 1.44
SH3D21-202ENST00000474766 RIOK1Q9BRS2 568 aaKnown RBP24.06■■□□□ 1.44
SH3D21-202ENST00000474766 ZC3H12CQ9C0D7 883 aaKnown RBP24.06■■□□□ 1.44
SH3D21-202ENST00000474766 CCDC196A0A1B0GTZ2 297 aa24.05■■□□□ 1.44
SH3D21-202ENST00000474766 VWA3AA6NCI4 1184 aa24.05■■□□□ 1.44
SH3D21-202ENST00000474766 YDJCA8MPS7 323 aa24.05■■□□□ 1.44
SH3D21-202ENST00000474766 CASQ1P31415 396 aa24.05■■□□□ 1.44
SH3D21-202ENST00000474766 GUCY1A2P33402 732 aa24.05■■□□□ 1.44
SH3D21-202ENST00000474766 MYL5Q02045 173 aa24.05■■□□□ 1.44
SH3D21-202ENST00000474766 TRIM22Q8IYM9 498 aa24.05■■□□□ 1.44
SH3D21-202ENST00000474766 CRACR2BQ8N4Y2 399 aaPredicted RBP24.05■■□□□ 1.44
SH3D21-202ENST00000474766 MSL3Q8N5Y2 521 aaKnown RBP24.05■■□□□ 1.44
SH3D21-202ENST00000474766 RASSF4Q9H2L5 321 aa24.05■■□□□ 1.44
SH3D21-202ENST00000474766 TOMM22Q9NS69 142 aa24.05■■□□□ 1.44
SH3D21-202ENST00000474766 MRFAP1Q9Y605 127 aa24.05■■□□□ 1.44
SH3D21-202ENST00000474766 GLTPD2A6NH11 291 aa24.05■■□□□ 1.44
SH3D21-202ENST00000474766 CUTAO60888 179 aa24.05■■□□□ 1.44
SH3D21-202ENST00000474766 LMOD1P29536 600 aaPredicted RBP24.05■■□□□ 1.44
SH3D21-202ENST00000474766 RAI14Q9P0K7 980 aa24.05■■□□□ 1.44
SH3D21-202ENST00000474766 ABCF2Q9UG63 623 aa24.05■■□□□ 1.44
SH3D21-202ENST00000474766 ZNRF3Q9ULT6 936 aa24.05■■□□□ 1.44
SH3D21-202ENST00000474766 PPP2R2CQ9Y2T4 447 aa24.05■■□□□ 1.44
SH3D21-202ENST00000474766 SEC23AQ15436 765 aa24.04■■□□□ 1.44
SH3D21-202ENST00000474766 C15orf52Q6ZUT6 534 aaKnown RBP24.04■■□□□ 1.44
SH3D21-202ENST00000474766 FANCBQ8NB91 859 aa24.04■■□□□ 1.44
SH3D21-202ENST00000474766 DEXIO95424 95 aa24.03■■□□□ 1.44
SH3D21-202ENST00000474766 TOP1P11387 765 aaKnown RBP24.03■■□□□ 1.44
SH3D21-202ENST00000474766 PPP2R3AQ06190 1150 aa24.03■■□□□ 1.44
SH3D21-202ENST00000474766 BRD3Q15059 726 aa24.03■■□□□ 1.44
SH3D21-202ENST00000474766 CAVIN4Q5BKX8 364 aa24.03■■□□□ 1.44
SH3D21-202ENST00000474766 ZNF654Q8IZM8 581 aa24.03■■□□□ 1.44
SH3D21-202ENST00000474766 SDR42E1Q8WUS8 393 aa24.03■■□□□ 1.44
SH3D21-202ENST00000474766 FAM84BQ96KN1 310 aaPredicted RBP24.03■■□□□ 1.44
SH3D21-202ENST00000474766 FUT8Q9BYC5 575 aa24.03■■□□□ 1.44
SH3D21-202ENST00000474766 FOXP1Q9H334 677 aaPredicted RBP24.03■■□□□ 1.44
SH3D21-202ENST00000474766 CCDC151A5D8V7 595 aa24.03■■□□□ 1.44
SH3D21-202ENST00000474766 ECE2O60344 883 aa24.03■■□□□ 1.44
SH3D21-202ENST00000474766 DDNO94850 711 aaPredicted RBP24.03■■□□□ 1.44
SH3D21-202ENST00000474766 PPP2R5BQ15173 497 aa24.03■■□□□ 1.44
SH3D21-202ENST00000474766 TMEM139Q8IV31 216 aa24.03■■□□□ 1.44
SH3D21-202ENST00000474766 ESR2Q92731 530 aa24.03■■□□□ 1.44
SH3D21-202ENST00000474766 BTBD18B2RXH4 712 aa24.02■■□□□ 1.44
SH3D21-202ENST00000474766 SERPINC1P01008 464 aa24.02■■□□□ 1.44
SH3D21-202ENST00000474766 SAFBQ15424 915 aaKnown RBP eCLIP24.02■■□□□ 1.44
SH3D21-202ENST00000474766 GOLGA1Q92805 767 aa24.02■■□□□ 1.44
SH3D21-202ENST00000474766 UBAC1Q9BSL1 405 aa24.02■■□□□ 1.44
SH3D21-202ENST00000474766 WDR90Q96KV7 1748 aa24.02■■□□□ 1.44
SH3D21-202ENST00000474766 PSME4Q14997 1843 aa24.02■■□□□ 1.44
SH3D21-202ENST00000474766 BIN1O00499 593 aa24.01■■□□□ 1.43
SH3D21-202ENST00000474766 TOB1P50616 345 aaPredicted RBP24.01■■□□□ 1.43
SH3D21-202ENST00000474766 DIS3L2Q8IYB7 885 aaKnown RBP24.01■■□□□ 1.43
SH3D21-202ENST00000474766 CLIC6Q96NY7 704 aa24.01■■□□□ 1.43
SH3D21-202ENST00000474766 KCNQ5Q9NR82 932 aa24.01■■□□□ 1.43
SH3D21-202ENST00000474766 MAP2K7O14733 419 aa24.01■■□□□ 1.43
SH3D21-202ENST00000474766 STX10O60499 249 aa24.01■■□□□ 1.43
SH3D21-202ENST00000474766 FGRP09769 529 aa24.01■■□□□ 1.43
SH3D21-202ENST00000474766 ATP1A3P13637 1013 aa24.01■■□□□ 1.43
SH3D21-202ENST00000474766 EIF6P56537 245 aaKnown RBP24.01■■□□□ 1.43
SH3D21-202ENST00000474766 TUBB4BP68371 445 aa24.01■■□□□ 1.43
SH3D21-202ENST00000474766 CXCL9Q07325 125 aa24.01■■□□□ 1.43
SH3D21-202ENST00000474766 CFAP100Q494V2 611 aa24.01■■□□□ 1.43
SH3D21-202ENST00000474766 DPY19L2Q6NUT2 758 aa24.01■■□□□ 1.43
SH3D21-202ENST00000474766 FBXO33Q7Z6M2 555 aa24.01■■□□□ 1.43
SH3D21-202ENST00000474766 ELOA2Q8IYF1 753 aaPredicted RBP24.01■■□□□ 1.43
SH3D21-202ENST00000474766 PARD6BQ9BYG5 372 aa24.01■■□□□ 1.43
SH3D21-202ENST00000474766 NMRK2Q9NPI5 230 aa24.01■■□□□ 1.43
SH3D21-202ENST00000474766 ZNF646O15015 1829 aaPredicted RBP24■■□□□ 1.43
SH3D21-202ENST00000474766 MINDY4BA8MYZ0 360 aa24■■□□□ 1.43
SH3D21-202ENST00000474766 SEMA3EO15041 775 aa24■■□□□ 1.43
SH3D21-202ENST00000474766 STK11IPQ8N1F8 1099 aa24■■□□□ 1.43
SH3D21-202ENST00000474766 KRI1Q8N9T8 703 aaKnown RBP24■■□□□ 1.43
SH3D21-202ENST00000474766 ZNF384Q8TF68 577 aa24■■□□□ 1.43
SH3D21-202ENST00000474766 HNRNPLLQ8WVV9 542 aaKnown RBP24■■□□□ 1.43
SH3D21-202ENST00000474766 GPBP1L1Q9HC44 474 aaPredicted RBP24■■□□□ 1.43
SH3D21-202ENST00000474766 RAD17O75943 681 aa24■■□□□ 1.43
SH3D21-202ENST00000474766 TXLNAP40222 546 aa24■■□□□ 1.43
SH3D21-202ENST00000474766 TBX2Q13207 712 aaPredicted RBP24■■□□□ 1.43
SH3D21-202ENST00000474766 RILPL1Q5EBL4 403 aa24■■□□□ 1.43
SH3D21-202ENST00000474766 CTR9Q6PD62 1173 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms