RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 SPZ1Q9BXG8 430 aa23.47■■□□□ 1.35
EDEM3-206ENST00000474725 MYH6P13533 1939 aa23.47■■□□□ 1.35
EDEM3-206ENST00000474725 SSC5DA1L4H1 1573 aa23.46■■□□□ 1.35
EDEM3-206ENST00000474725 FAM173BQ6P4H8 233 aa23.46■■□□□ 1.35
EDEM3-206ENST00000474725 KRT26Q7Z3Y9 468 aa23.46■■□□□ 1.35
EDEM3-206ENST00000474725 ZSCAN16Q9H4T2 348 aaPredicted RBP23.46■■□□□ 1.35
EDEM3-206ENST00000474725 TMX2Q9Y320 296 aa23.46■■□□□ 1.35
EDEM3-206ENST00000474725 WDR90Q96KV7 1748 aa23.46■■□□□ 1.35
EDEM3-206ENST00000474725 VEGFAP15692 232 aaPredicted RBP23.45■■□□□ 1.35
EDEM3-206ENST00000474725 SMARCA1P28370 1054 aa23.45■■□□□ 1.35
EDEM3-206ENST00000474725 TTBK2Q6IQ55 1244 aa23.45■■□□□ 1.35
EDEM3-206ENST00000474725 KCTD1Q719H9 257 aa23.45■■□□□ 1.35
EDEM3-206ENST00000474725 DCAF4Q8WV16 495 aa23.45■■□□□ 1.35
EDEM3-206ENST00000474725 SYNPO2Q9UMS6 1093 aa23.45■■□□□ 1.35
EDEM3-206ENST00000474725 ATAD5Q96QE3 1844 aa23.45■■□□□ 1.34
EDEM3-206ENST00000474725 NDUFB10O96000 172 aa23.45■■□□□ 1.34
EDEM3-206ENST00000474725 SCG2P13521 617 aa23.45■■□□□ 1.34
EDEM3-206ENST00000474725 PFKFB3Q16875 520 aaPredicted RBP23.45■■□□□ 1.34
EDEM3-206ENST00000474725 SHISA4Q96DD7 197 aa23.45■■□□□ 1.34
EDEM3-206ENST00000474725 VAT1LQ9HCJ6 419 aa23.45■■□□□ 1.34
EDEM3-206ENST00000474725 VPS54Q9P1Q0 977 aa23.45■■□□□ 1.34
EDEM3-206ENST00000474725 RBM27Q9P2N5 1060 aaKnown RBP23.45■■□□□ 1.34
EDEM3-206ENST00000474725 KCNJ14Q9UNX9 436 aa23.45■■□□□ 1.34
EDEM3-206ENST00000474725 BAZ2BQ9UIF8 2168 aaKnown RBP23.44■■□□□ 1.34
EDEM3-206ENST00000474725 SLC1A4P43007 532 aa23.44■■□□□ 1.34
EDEM3-206ENST00000474725 DNM1Q05193 864 aaKnown RBP23.44■■□□□ 1.34
EDEM3-206ENST00000474725 GSE1Q14687 1217 aa23.44■■□□□ 1.34
EDEM3-206ENST00000474725 GPATCH4Q5T3I0 446 aaKnown RBP23.44■■□□□ 1.34
EDEM3-206ENST00000474725 USP48Q86UV5 1035 aa23.44■■□□□ 1.34
EDEM3-206ENST00000474725 WRNIP1Q96S55 665 aa23.44■■□□□ 1.34
EDEM3-206ENST00000474725 GLIS2Q9BZE0 524 aaPredicted RBP23.44■■□□□ 1.34
EDEM3-206ENST00000474725 RIOX1Q9H6W3 641 aa23.44■■□□□ 1.34
EDEM3-206ENST00000474725 GINM1Q9NU53 330 aa23.44■■□□□ 1.34
EDEM3-206ENST00000474725 ISY1Q9ULR0 285 aaKnown RBP23.43■■□□□ 1.34
EDEM3-206ENST00000474725 KIF28PB7ZC32 967 aa23.43■■□□□ 1.34
EDEM3-206ENST00000474725 KIF23Q02241 960 aaPredicted RBP23.43■■□□□ 1.34
EDEM3-206ENST00000474725 PRKG1Q13976 671 aa23.43■■□□□ 1.34
EDEM3-206ENST00000474725 ZKSCAN4Q969J2 545 aaPredicted RBP23.43■■□□□ 1.34
EDEM3-206ENST00000474725 KLRG1Q96E93 195 aa23.43■■□□□ 1.34
EDEM3-206ENST00000474725 GMCL1Q96IK5 515 aa23.43■■□□□ 1.34
EDEM3-206ENST00000474725 NUP88Q99567 741 aaPredicted RBP23.43■■□□□ 1.34
EDEM3-206ENST00000474725 MMP1P03956 469 aa23.42■■□□□ 1.34
EDEM3-206ENST00000474725 XBP1P17861 261 aa23.42■■□□□ 1.34
EDEM3-206ENST00000474725 KIAA1755Q5JYT7 1200 aa23.42■■□□□ 1.34
EDEM3-206ENST00000474725 PNMA8AQ86V59 439 aaPredicted RBP23.42■■□□□ 1.34
EDEM3-206ENST00000474725 CNPY2Q9Y2B0 182 aa23.42■■□□□ 1.34
EDEM3-206ENST00000474725 DDX11L8A8MPP1 907 aa23.41■■□□□ 1.34
EDEM3-206ENST00000474725 USP2O75604 605 aaPredicted RBP23.41■■□□□ 1.34
EDEM3-206ENST00000474725 SLC16A2P36021 539 aa23.41■■□□□ 1.34
EDEM3-206ENST00000474725 SCYL3Q8IZE3 742 aa23.41■■□□□ 1.34
EDEM3-206ENST00000474725 SPICE1Q8N0Z3 855 aa23.41■■□□□ 1.34
EDEM3-206ENST00000474725 RRP36Q96EU6 259 aaKnown RBP23.41■■□□□ 1.34
EDEM3-206ENST00000474725 PIGSQ96S52 555 aa23.41■■□□□ 1.34
EDEM3-206ENST00000474725 GOPCQ9HD26 462 aa23.41■■□□□ 1.34
EDEM3-206ENST00000474725 GOLGA6L22H0YM25 854 aa23.41■■□□□ 1.34
EDEM3-206ENST00000474725 HOMER1Q86YM7 354 aa23.41■■□□□ 1.34
EDEM3-206ENST00000474725 ADGRF4Q8IZF3 695 aa23.41■■□□□ 1.34
EDEM3-206ENST00000474725 GPKOWQ92917 476 aaPredicted RBP eCLIP23.41■■□□□ 1.34
EDEM3-206ENST00000474725 SH2D4AQ9H788 454 aa23.41■■□□□ 1.34
EDEM3-206ENST00000474725 NCLP19338 710 aaKnown RBP23.4■■□□□ 1.34
EDEM3-206ENST00000474725 ZYXQ15942 572 aaKnown RBP23.4■■□□□ 1.34
EDEM3-206ENST00000474725 PHF20Q9BVI0 1012 aa23.4■■□□□ 1.34
EDEM3-206ENST00000474725 VCPKMTQ9H867 229 aa23.4■■□□□ 1.34
EDEM3-206ENST00000474725 GDPD2Q9HCC8 539 aa23.4■■□□□ 1.34
EDEM3-206ENST00000474725 DCAF8L1A6NGE4 600 aa23.39■■□□□ 1.34
EDEM3-206ENST00000474725 BMP3P12645 472 aa23.39■■□□□ 1.34
EDEM3-206ENST00000474725 CDCA5Q96FF9 252 aa23.39■■□□□ 1.34
EDEM3-206ENST00000474725 JMJD4Q9H9V9 463 aa23.39■■□□□ 1.34
EDEM3-206ENST00000474725 RRAGCQ9HB90 399 aa23.39■■□□□ 1.34
EDEM3-206ENST00000474725 CLEC11AQ9Y240 323 aa23.39■■□□□ 1.34
EDEM3-206ENST00000474725 DOCK1Q14185 1865 aa23.39■■□□□ 1.34
EDEM3-206ENST00000474725 POTEIP0CG38 1075 aa23.39■■□□□ 1.33
EDEM3-206ENST00000474725 POTEJP0CG39 1038 aa23.39■■□□□ 1.33
EDEM3-206ENST00000474725 SAFBQ15424 915 aaKnown RBP eCLIP23.39■■□□□ 1.33
EDEM3-206ENST00000474725 WWC2Q6AWC2 1192 aa23.39■■□□□ 1.33
EDEM3-206ENST00000474725 TFIP11Q9UBB9 837 aaKnown RBP23.39■■□□□ 1.33
EDEM3-206ENST00000474725 SEC63Q9UGP8 760 aaKnown RBP23.39■■□□□ 1.33
EDEM3-206ENST00000474725 BTBD18B2RXH4 712 aa23.38■■□□□ 1.33
EDEM3-206ENST00000474725 GNL2Q13823 731 aaKnown RBP23.38■■□□□ 1.33
EDEM3-206ENST00000474725 HEATR3Q7Z4Q2 680 aa23.38■■□□□ 1.33
EDEM3-206ENST00000474725 DIS3L2Q8IYB7 885 aaKnown RBP23.38■■□□□ 1.33
EDEM3-206ENST00000474725 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.38■■□□□ 1.33
EDEM3-206ENST00000474725 FEZ1Q99689 392 aa23.38■■□□□ 1.33
EDEM3-206ENST00000474725 PICK1Q9NRD5 415 aa23.38■■□□□ 1.33
EDEM3-206ENST00000474725 TCHHQ07283 1943 aa23.38■■□□□ 1.33
EDEM3-206ENST00000474725 USP17L10C9JJH3 530 aa23.37■■□□□ 1.33
EDEM3-206ENST00000474725 PRPF40AO75400 957 aaKnown RBP23.37■■□□□ 1.33
EDEM3-206ENST00000474725 PTPRAP18433 802 aa23.37■■□□□ 1.33
EDEM3-206ENST00000474725 U2AF2P26368 475 aaKnown RBP eCLIP23.37■■□□□ 1.332e-7■■■■□ 21.8
EDEM3-206ENST00000474725 KRT85P78386 507 aa23.37■■□□□ 1.33
EDEM3-206ENST00000474725 BRAPQ7Z569 592 aa23.37■■□□□ 1.33
EDEM3-206ENST00000474725 OXER1Q8TDS5 423 aa23.37■■□□□ 1.33
EDEM3-206ENST00000474725 SH3GLB2Q9NR46 395 aa23.37■■□□□ 1.33
EDEM3-206ENST00000474725 TMEM232C9JQI7 657 aa23.37■■□□□ 1.33
EDEM3-206ENST00000474725 TYW1BQ6NUM6 668 aa23.37■■□□□ 1.33
EDEM3-206ENST00000474725 LMBRD1Q9NUN5 540 aa23.37■■□□□ 1.33
EDEM3-206ENST00000474725 BARHL2Q9NY43 387 aa23.37■■□□□ 1.33
EDEM3-206ENST00000474725 STXBP3O00186 592 aa23.36■■□□□ 1.33
EDEM3-206ENST00000474725 FIBPO43427 364 aa23.36■■□□□ 1.33
EDEM3-206ENST00000474725 PPP1R12BO60237 982 aaPredicted RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms