RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 WNK4Q96J92 1243 aa11.7□□□□□ -0.54
COL8A1-206ENST00000474648 TMX3Q96JJ7 454 aa11.7□□□□□ -0.54
COL8A1-206ENST00000474648 ZSCAN31Q96LW9 406 aaPredicted RBP11.7□□□□□ -0.54
COL8A1-206ENST00000474648 MAP3K14Q99558 947 aa11.7□□□□□ -0.54
COL8A1-206ENST00000474648 VCPKMTQ9H867 229 aa11.7□□□□□ -0.54
COL8A1-206ENST00000474648 PALM3A6NDB9 673 aaPredicted RBP11.69□□□□□ -0.54
COL8A1-206ENST00000474648 GOLGA8BA8MQT2 603 aa11.69□□□□□ -0.54
COL8A1-206ENST00000474648 C19orf81C9J6K1 198 aa11.69□□□□□ -0.54
COL8A1-206ENST00000474648 PDHBP11177 359 aa11.69□□□□□ -0.54
COL8A1-206ENST00000474648 CDC27P30260 824 aa11.69□□□□□ -0.54
COL8A1-206ENST00000474648 ADD1P35611 737 aaKnown RBP11.69□□□□□ -0.54
COL8A1-206ENST00000474648 APLP1P51693 650 aa11.69□□□□□ -0.54
COL8A1-206ENST00000474648 CCT2P78371 535 aaKnown RBP11.69□□□□□ -0.54
COL8A1-206ENST00000474648 SCRN1Q12765 414 aa11.69□□□□□ -0.54
COL8A1-206ENST00000474648 STK3Q13188 491 aa11.69□□□□□ -0.54
COL8A1-206ENST00000474648 SLC35G1Q2M3R5 365 aa11.69□□□□□ -0.54
COL8A1-206ENST00000474648 SPRYD7Q5W111 196 aa11.69□□□□□ -0.54
COL8A1-206ENST00000474648 RGMBQ6NW40 437 aa11.69□□□□□ -0.54
COL8A1-206ENST00000474648 USP17L2Q6R6M4 530 aa11.69□□□□□ -0.54
COL8A1-206ENST00000474648 NUP133Q8WUM0 1156 aa11.69□□□□□ -0.54
COL8A1-206ENST00000474648 CHMP4CQ96CF2 233 aa11.69□□□□□ -0.54
COL8A1-206ENST00000474648 GMCL1Q96IK5 515 aa11.69□□□□□ -0.54
COL8A1-206ENST00000474648 MS4A4AQ96JQ5 239 aa11.69□□□□□ -0.54
COL8A1-206ENST00000474648 C12orf42Q96LP6 360 aa11.69□□□□□ -0.54
COL8A1-206ENST00000474648 NUP88Q99567 741 aaPredicted RBP11.69□□□□□ -0.54
COL8A1-206ENST00000474648 SH2D4AQ9H788 454 aa11.69□□□□□ -0.54
COL8A1-206ENST00000474648 BMP2KQ9NSY1 1161 aaPredicted RBP11.69□□□□□ -0.54
COL8A1-206ENST00000474648 MAD2L2Q9UI95 211 aa11.69□□□□□ -0.54
COL8A1-206ENST00000474648 NID2Q14112 1375 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 A0A0G2JLL6 359 aaPredicted RBP11.68□□□□□ -0.54
COL8A1-206ENST00000474648 GOLGA8AA7E2F4 631 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 FAM155AB1AL88 458 aaPredicted RBP11.68□□□□□ -0.54
COL8A1-206ENST00000474648 ATMINO43313 823 aaPredicted RBP11.68□□□□□ -0.54
COL8A1-206ENST00000474648 GOLGA8HP0CJ92 632 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 CALM1P0DP23 149 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 CALM2P0DP24 149 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 CALM3P0DP25 149 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 METAP2P50579 478 aaKnown RBP eCLIP11.68□□□□□ -0.54
COL8A1-206ENST00000474648 ZNF157P51786 506 aaPredicted RBP11.68□□□□□ -0.54
COL8A1-206ENST00000474648 USP14P54578 494 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 HMGCS2P54868 508 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 ZNF543Q08ER8 600 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 CUL4AQ13619 759 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 ZYXQ15942 572 aaKnown RBP11.68□□□□□ -0.54
COL8A1-206ENST00000474648 NTRK3Q16288 839 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 ASTLQ6HA08 431 aaPredicted RBP11.68□□□□□ -0.54
COL8A1-206ENST00000474648 TTBK2Q6IQ55 1244 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 PRRT2Q7Z6L0 340 aaPredicted RBP11.68□□□□□ -0.54
COL8A1-206ENST00000474648 MICU3Q86XE3 530 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 RASAL3Q86YV0 1011 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 CCDC144CPQ8IYA2 1237 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 SPICE1Q8N0Z3 855 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 STAG2Q8N3U4 1231 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 DCAF4Q8WV16 495 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 GTF3C6Q969F1 213 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 HHIPL1Q96JK4 782 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 FEZ1Q99689 392 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 SLKQ9H2G2 1235 aaPredicted RBP11.68□□□□□ -0.54
COL8A1-206ENST00000474648 NCOA5Q9HCD5 579 aaKnown RBP11.68□□□□□ -0.54
COL8A1-206ENST00000474648 GOPCQ9HD26 462 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 SH2B1Q9NRF2 756 aaPredicted RBP11.68□□□□□ -0.54
COL8A1-206ENST00000474648 NAP1L2Q9ULW6 460 aaPredicted RBP11.68□□□□□ -0.54
COL8A1-206ENST00000474648 MTMR7Q9Y216 660 aa11.68□□□□□ -0.54
COL8A1-206ENST00000474648 K7ELQ4 463 aaPredicted RBP11.67□□□□□ -0.54
COL8A1-206ENST00000474648 CTDNEP1O95476 244 aa11.67□□□□□ -0.54
COL8A1-206ENST00000474648 BMP3P12645 472 aa11.67□□□□□ -0.54
COL8A1-206ENST00000474648 SLC1A4P43007 532 aa11.67□□□□□ -0.54
COL8A1-206ENST00000474648 FUT2Q10981 343 aa11.67□□□□□ -0.54
COL8A1-206ENST00000474648 PPP2R5BQ15173 497 aa11.67□□□□□ -0.54
COL8A1-206ENST00000474648 RTN1Q16799 776 aa11.67□□□□□ -0.54
COL8A1-206ENST00000474648 GPAT2Q6NUI2 795 aa11.67□□□□□ -0.54
COL8A1-206ENST00000474648 KCTD1Q719H9 257 aa11.67□□□□□ -0.54
COL8A1-206ENST00000474648 NBPF11Q86T75 865 aa11.67□□□□□ -0.54
COL8A1-206ENST00000474648 SRBD1Q8N5C6 995 aaKnown RBP11.67□□□□□ -0.54
COL8A1-206ENST00000474648 LPAR1Q92633 364 aa11.67□□□□□ -0.54
COL8A1-206ENST00000474648 GPCPD1Q9NPB8 672 aa11.67□□□□□ -0.54
COL8A1-206ENST00000474648 ABT1Q9ULW3 272 aaKnown RBP11.67□□□□□ -0.54
COL8A1-206ENST00000474648 FRMPD2Q68DX3 1309 aaPredicted RBP11.66□□□□□ -0.54
COL8A1-206ENST00000474648 TESPA1A2RU30 521 aaPredicted RBP11.66□□□□□ -0.54
COL8A1-206ENST00000474648 RASSF10A6NK89 507 aa11.66□□□□□ -0.54
COL8A1-206ENST00000474648 KLRF2D3W0D1 207 aa11.66□□□□□ -0.54
COL8A1-206ENST00000474648 WDR46O15213 610 aaKnown RBP11.66□□□□□ -0.54
COL8A1-206ENST00000474648 RAD21O60216 631 aa11.66□□□□□ -0.54
COL8A1-206ENST00000474648 DTNBO60941 627 aa11.66□□□□□ -0.54
COL8A1-206ENST00000474648 PLEKHA8P1O95397 391 aa11.66□□□□□ -0.54
COL8A1-206ENST00000474648 SLC10A3P09131 477 aa11.66□□□□□ -0.54
COL8A1-206ENST00000474648 PARP1P09874 1014 aaKnown RBP11.66□□□□□ -0.54
COL8A1-206ENST00000474648 ZBTB48P10074 688 aaPredicted RBP11.66□□□□□ -0.54
COL8A1-206ENST00000474648 VCAM1P19320 739 aa11.66□□□□□ -0.54
COL8A1-206ENST00000474648 TIE1P35590 1138 aa11.66□□□□□ -0.54
COL8A1-206ENST00000474648 MKRN3Q13064 507 aaKnown RBP11.66□□□□□ -0.54
COL8A1-206ENST00000474648 SNAPC2Q13487 334 aa11.66□□□□□ -0.54
COL8A1-206ENST00000474648 ASPRV1Q53RT3 343 aa11.66□□□□□ -0.54
COL8A1-206ENST00000474648 FAM83BQ5T0W9 1011 aa11.66□□□□□ -0.54
COL8A1-206ENST00000474648 TREML2Q5T2D2 321 aa11.66□□□□□ -0.54
COL8A1-206ENST00000474648 BTNL9Q6UXG8 535 aa11.66□□□□□ -0.54
COL8A1-206ENST00000474648 TMTC3Q6ZXV5 915 aa11.66□□□□□ -0.54
COL8A1-206ENST00000474648 CCDC83Q8IWF9 413 aa11.66□□□□□ -0.54
COL8A1-206ENST00000474648 HSCBQ8IWL3 235 aa11.66□□□□□ -0.54
COL8A1-206ENST00000474648 CMTR1Q8N1G2 835 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms