RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 PTPDC1A2A3K4 754 aa11.98□□□□□ -0.49
COL12A1-206ENST00000474564 SPDYE5A6NIY4 337 aa11.98□□□□□ -0.49
COL12A1-206ENST00000474564 PRPF3O43395 683 aaKnown RBP11.98□□□□□ -0.49
COL12A1-206ENST00000474564 LARGE1O95461 756 aa11.98□□□□□ -0.49
COL12A1-206ENST00000474564 FMNL1O95466 1100 aaPredicted RBP11.98□□□□□ -0.49
COL12A1-206ENST00000474564 NDUFB10O96000 172 aa11.98□□□□□ -0.49
COL12A1-206ENST00000474564 FDX1P10109 184 aa11.98□□□□□ -0.49
COL12A1-206ENST00000474564 GJB2P29033 226 aa11.98□□□□□ -0.49
COL12A1-206ENST00000474564 STAT2P52630 851 aa11.98□□□□□ -0.49
COL12A1-206ENST00000474564 HUNKP57058 714 aa11.98□□□□□ -0.49
COL12A1-206ENST00000474564 PPIL2Q13356 520 aa11.98□□□□□ -0.49
COL12A1-206ENST00000474564 SNAPC2Q13487 334 aa11.98□□□□□ -0.49
COL12A1-206ENST00000474564 MTMR2Q13614 643 aa11.98□□□□□ -0.49
COL12A1-206ENST00000474564 COL9A3Q14050 684 aaPredicted RBP11.98□□□□□ -0.49
COL12A1-206ENST00000474564 SAFBQ15424 915 aaKnown RBP eCLIP11.98□□□□□ -0.49
COL12A1-206ENST00000474564 LARP1BQ659C4 914 aaKnown RBP11.98□□□□□ -0.49
COL12A1-206ENST00000474564 TMTC3Q6ZXV5 915 aa11.98□□□□□ -0.49
COL12A1-206ENST00000474564 CCDC82Q8N4S0 544 aa11.98□□□□□ -0.49
COL12A1-206ENST00000474564 NKX2-3Q8TAU0 364 aa11.98□□□□□ -0.49
COL12A1-206ENST00000474564 ACER1Q8TDN7 264 aa11.98□□□□□ -0.49
COL12A1-206ENST00000474564 OPTNQ96CV9 577 aa11.98□□□□□ -0.49
COL12A1-206ENST00000474564 DDX11Q96FC9 970 aa11.98□□□□□ -0.49
COL12A1-206ENST00000474564 OTUD5Q96G74 571 aa11.98□□□□□ -0.49
COL12A1-206ENST00000474564 TANGO6Q9C0B7 1094 aa11.98□□□□□ -0.49
COL12A1-206ENST00000474564 CHMP5Q9NZZ3 219 aa11.98□□□□□ -0.49
COL12A1-206ENST00000474564 CIZ1Q9ULV3 898 aaPredicted RBP11.98□□□□□ -0.49
COL12A1-206ENST00000474564 SNCAIPQ9Y6H5 919 aa11.98□□□□□ -0.49
COL12A1-206ENST00000474564 FRMPD2Q68DX3 1309 aaPredicted RBP11.97□□□□□ -0.49
COL12A1-206ENST00000474564 STK36Q9NRP7 1315 aa11.97□□□□□ -0.49
COL12A1-206ENST00000474564 A0A1W2PRG0 241 aa11.97□□□□□ -0.49
COL12A1-206ENST00000474564 TMEM232C9JQI7 657 aa11.97□□□□□ -0.49
COL12A1-206ENST00000474564 KIF3CO14782 793 aa11.97□□□□□ -0.49
COL12A1-206ENST00000474564 SNHG28P0DPA3 235 aa11.97□□□□□ -0.49
COL12A1-206ENST00000474564 CDC27P30260 824 aa11.97□□□□□ -0.49
COL12A1-206ENST00000474564 ECE1P42892 770 aa11.97□□□□□ -0.49
COL12A1-206ENST00000474564 GTF2A2P52657 109 aa11.97□□□□□ -0.49
COL12A1-206ENST00000474564 JAG1P78504 1218 aa11.97□□□□□ -0.49
COL12A1-206ENST00000474564 GNL2Q13823 731 aaKnown RBP11.97□□□□□ -0.49
COL12A1-206ENST00000474564 DLK2Q6UY11 383 aa11.97□□□□□ -0.49
COL12A1-206ENST00000474564 KCTD1Q719H9 257 aa11.97□□□□□ -0.49
COL12A1-206ENST00000474564 SIAH1Q8IUQ4 282 aa11.97□□□□□ -0.49
COL12A1-206ENST00000474564 SPICE1Q8N0Z3 855 aa11.97□□□□□ -0.49
COL12A1-206ENST00000474564 FAM177A1Q8N128 213 aaPredicted RBP11.97□□□□□ -0.49
COL12A1-206ENST00000474564 NSUN7Q8NE18 718 aaKnown RBP11.97□□□□□ -0.49
COL12A1-206ENST00000474564 SPZ1Q9BXG8 430 aa11.97□□□□□ -0.49
COL12A1-206ENST00000474564 VAT1LQ9HCJ6 419 aa11.97□□□□□ -0.49
COL12A1-206ENST00000474564 BRMS1Q9HCU9 246 aa11.97□□□□□ -0.49
COL12A1-206ENST00000474564 HOXC10Q9NYD6 342 aa11.97□□□□□ -0.49
COL12A1-206ENST00000474564 MAD2L2Q9UI95 211 aa11.97□□□□□ -0.49
COL12A1-206ENST00000474564 ABT1Q9ULW3 272 aaKnown RBP11.97□□□□□ -0.49
COL12A1-206ENST00000474564 FZD1Q9UP38 647 aa11.97□□□□□ -0.49
COL12A1-206ENST00000474564 AFG3L2Q9Y4W6 797 aa11.97□□□□□ -0.49
COL12A1-206ENST00000474564 V9GY48 417 aaPredicted RBP11.97□□□□□ -0.49
COL12A1-206ENST00000474564 SIPA1L1O43166 1804 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 TMEM88BA6NKF7 163 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 USP17L15C9J2P7 530 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 USP17L13C9JLJ4 530 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 USP17L11C9JVI0 530 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 USP17L18D6R9N7 530 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 USP17L22D6RA61 530 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 USP17L17D6RBQ6 530 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 USP17L19D6RCP7 530 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 USP17L20D6RJB6 530 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 hCG_1984214I3L0E3 225 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 PLA2G6O60733 806 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 ZBED4O75132 1171 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 GOLGA8HP0CJ92 632 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 ZBTB48P10074 688 aaPredicted RBP11.96□□□□□ -0.49
COL12A1-206ENST00000474564 CETPP11597 493 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 OSBPP22059 807 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 ZNF157P51786 506 aaPredicted RBP11.96□□□□□ -0.49
COL12A1-206ENST00000474564 USP17L24Q0WX57 530 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 FAM83BQ5T0W9 1011 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 GADL1Q6ZQY3 521 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 ZNF713Q8N859 430 aaPredicted RBP11.96□□□□□ -0.49
COL12A1-206ENST00000474564 PRPF38AQ8NAV1 312 aaKnown RBP11.96□□□□□ -0.49
COL12A1-206ENST00000474564 PROCA1Q8NCQ7 364 aaPredicted RBP11.96□□□□□ -0.49
COL12A1-206ENST00000474564 RGS22Q8NE09 1264 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 CCDC148Q8NFR7 591 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 SMARCC2Q8TAQ2 1214 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 CCDC102AQ96A19 550 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 C8orf76Q96K31 380 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 C12orf42Q96LP6 360 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 ALG1Q9BT22 464 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 ATP6V1DQ9Y5K8 247 aa11.96□□□□□ -0.49
COL12A1-206ENST00000474564 SSC5DA1L4H1 1573 aa11.96□□□□□ -0.5
COL12A1-206ENST00000474564 POLR2AP24928 1970 aaKnown RBP11.96□□□□□ -0.5
COL12A1-206ENST00000474564 PAPPA2Q9BXP8 1791 aa11.95□□□□□ -0.5
COL12A1-206ENST00000474564 WDR33Q9C0J8 1336 aaKnown RBP11.95□□□□□ -0.5
COL12A1-206ENST00000474564 FLOT1O75955 427 aa11.95□□□□□ -0.5
COL12A1-206ENST00000474564 CALML3P27482 149 aa11.95□□□□□ -0.5
COL12A1-206ENST00000474564 HMGCS2P54868 508 aa11.95□□□□□ -0.5
COL12A1-206ENST00000474564 IRX3P78415 501 aaPredicted RBP11.95□□□□□ -0.5
COL12A1-206ENST00000474564 SHROOM1Q2M3G4 852 aaPredicted RBP11.95□□□□□ -0.5
COL12A1-206ENST00000474564 SH3D19Q5HYK7 790 aa11.95□□□□□ -0.5
COL12A1-206ENST00000474564 SYDE2Q5VT97 1194 aa11.95□□□□□ -0.5
COL12A1-206ENST00000474564 OTUD7BQ6GQQ9 843 aa11.95□□□□□ -0.5
COL12A1-206ENST00000474564 SAMD1Q6SPF0 538 aaPredicted RBP11.95□□□□□ -0.5
COL12A1-206ENST00000474564 MOB2Q70IA6 237 aa11.95□□□□□ -0.5
COL12A1-206ENST00000474564 STAG2Q8N3U4 1231 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms