RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 TSPY2A6NKD2 308 aa22.07■■□□□ 1.12
CCDC171-206ENST00000474193 SLC25A27O95847 323 aa22.07■■□□□ 1.12
CCDC171-206ENST00000474193 ALX1Q15699 326 aa22.07■■□□□ 1.12
CCDC171-206ENST00000474193 FAM83BQ5T0W9 1011 aa22.07■■□□□ 1.12
CCDC171-206ENST00000474193 POTEEQ6S8J3 1075 aa22.07■■□□□ 1.12
CCDC171-206ENST00000474193 NCAPG2Q86XI2 1143 aa22.07■■□□□ 1.12
CCDC171-206ENST00000474193 TRIB2Q92519 343 aa22.07■■□□□ 1.12
CCDC171-206ENST00000474193 USP6NLQ92738 828 aa22.07■■□□□ 1.12
CCDC171-206ENST00000474193 ATG4CQ96DT6 458 aa22.07■■□□□ 1.12
CCDC171-206ENST00000474193 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.07■■□□□ 1.12
CCDC171-206ENST00000474193 MOV10L1Q9BXT6 1211 aaKnown RBP22.07■■□□□ 1.12
CCDC171-206ENST00000474193 PAK6Q9NQU5 681 aaPredicted RBP22.07■■□□□ 1.12
CCDC171-206ENST00000474193 TOMM22Q9NS69 142 aa22.07■■□□□ 1.12
CCDC171-206ENST00000474193 DIAPH3Q9NSV4 1193 aa22.07■■□□□ 1.12
CCDC171-206ENST00000474193 MTMR4Q9NYA4 1195 aa22.07■■□□□ 1.12
CCDC171-206ENST00000474193 NMIQ13287 307 aaPredicted RBP22.06■■□□□ 1.12
CCDC171-206ENST00000474193 DPF3Q92784 378 aa22.06■■□□□ 1.12
CCDC171-206ENST00000474193 MKL1Q969V6 931 aa22.06■■□□□ 1.12
CCDC171-206ENST00000474193 CEP95Q96GE4 821 aa22.06■■□□□ 1.12
CCDC171-206ENST00000474193 FAM227BQ96M60 508 aa22.06■■□□□ 1.12
CCDC171-206ENST00000474193 RANBP6O60518 1105 aaKnown RBP22.05■■□□□ 1.12
CCDC171-206ENST00000474193 FARP2O94887 1054 aaPredicted RBP22.05■■□□□ 1.12
CCDC171-206ENST00000474193 PRKAR2AP13861 404 aaKnown RBP22.05■■□□□ 1.12
CCDC171-206ENST00000474193 ERCC3P19447 782 aa22.05■■□□□ 1.12
CCDC171-206ENST00000474193 SDSP20132 328 aa22.05■■□□□ 1.12
CCDC171-206ENST00000474193 COPB2P35606 906 aa22.05■■□□□ 1.12
CCDC171-206ENST00000474193 FAM47AQ5JRC9 791 aa22.05■■□□□ 1.12
CCDC171-206ENST00000474193 PRPF38AQ8NAV1 312 aaKnown RBP22.05■■□□□ 1.12
CCDC171-206ENST00000474193 ANAPC4Q9UJX5 808 aa22.05■■□□□ 1.12
CCDC171-206ENST00000474193 PPP1R9AQ9ULJ8 1098 aa22.05■■□□□ 1.12
CCDC171-206ENST00000474193 CENPFP49454 3210 aa22.05■■□□□ 1.12
CCDC171-206ENST00000474193 A0A0D9SFI3 127 aa22.04■■□□□ 1.12
CCDC171-206ENST00000474193 FCER1AP12319 257 aa22.04■■□□□ 1.12
CCDC171-206ENST00000474193 CTDSPL2Q05D32 466 aa22.04■■□□□ 1.12
CCDC171-206ENST00000474193 GRB14Q14449 540 aa22.04■■□□□ 1.12
CCDC171-206ENST00000474193 SKAP1Q86WV1 359 aa22.04■■□□□ 1.12
CCDC171-206ENST00000474193 SHISA4Q96DD7 197 aa22.04■■□□□ 1.12
CCDC171-206ENST00000474193 SLF1Q9BQI6 1058 aa22.04■■□□□ 1.12
CCDC171-206ENST00000474193 ISY1Q9ULR0 285 aaKnown RBP22.04■■□□□ 1.12
CCDC171-206ENST00000474193 CCDC171Q6TFL3 1326 aa22.04■■□□□ 1.12
CCDC171-206ENST00000474193 TNRC18O15417 2968 aaPredicted RBP22.03■■□□□ 1.12
CCDC171-206ENST00000474193 IGKV6D-41A0A0C4DH26 115 aa22.03■■□□□ 1.12
CCDC171-206ENST00000474193 ZBED4O75132 1171 aa22.03■■□□□ 1.12
CCDC171-206ENST00000474193 NDUFB10O96000 172 aa22.03■■□□□ 1.12
CCDC171-206ENST00000474193 FGAP02671 866 aa22.03■■□□□ 1.12
CCDC171-206ENST00000474193 HSPD1P10809 573 aaKnown RBP22.03■■□□□ 1.12
CCDC171-206ENST00000474193 STAT3P40763 770 aa22.03■■□□□ 1.12
CCDC171-206ENST00000474193 VPS53Q5VIR6 699 aa22.03■■□□□ 1.12
CCDC171-206ENST00000474193 ABRAQ8N0Z2 381 aa22.03■■□□□ 1.12
CCDC171-206ENST00000474193 ANKLE1Q8NAG6 615 aa22.03■■□□□ 1.12
CCDC171-206ENST00000474193 FBXO28Q9NVF7 368 aa22.03■■□□□ 1.12
CCDC171-206ENST00000474193 ADAMTS5Q9UNA0 930 aa22.03■■□□□ 1.12
CCDC171-206ENST00000474193 VWA5AO00534 786 aa22.02■■□□□ 1.12
CCDC171-206ENST00000474193 HOXC6P09630 235 aa22.02■■□□□ 1.12
CCDC171-206ENST00000474193 GSPT1P15170 499 aaKnown RBP22.02■■□□□ 1.12
CCDC171-206ENST00000474193 CACNB2Q08289 660 aaPredicted RBP22.02■■□□□ 1.12
CCDC171-206ENST00000474193 TRIM32Q13049 653 aa22.02■■□□□ 1.12
CCDC171-206ENST00000474193 SLFN13Q68D06 897 aa22.02■■□□□ 1.12
CCDC171-206ENST00000474193 GMCL1P1Q8NEA9 526 aa22.02■■□□□ 1.12
CCDC171-206ENST00000474193 CRISPLD2Q9H0B8 497 aa22.02■■□□□ 1.12
CCDC171-206ENST00000474193 FEM1BQ9UK73 627 aa22.02■■□□□ 1.12
CCDC171-206ENST00000474193 STX8Q9UNK0 236 aa22.02■■□□□ 1.12
CCDC171-206ENST00000474193 ADORA2AP29274 412 aa22.01■■□□□ 1.11
CCDC171-206ENST00000474193 TMEM132BQ14DG7 1078 aa22.01■■□□□ 1.11
CCDC171-206ENST00000474193 CCL14Q16627 93 aa22.01■■□□□ 1.11
CCDC171-206ENST00000474193 MAP3K21Q5TCX8 1036 aa22.01■■□□□ 1.11
CCDC171-206ENST00000474193 CWC27Q6UX04 472 aaKnown RBP22.01■■□□□ 1.11
CCDC171-206ENST00000474193 NECAB2Q7Z6G3 386 aa22.01■■□□□ 1.11
CCDC171-206ENST00000474193 RIOX2Q8IUF8 465 aa22.01■■□□□ 1.11
CCDC171-206ENST00000474193 NUP88Q99567 741 aaPredicted RBP22.01■■□□□ 1.11
CCDC171-206ENST00000474193 PLXNB2O15031 1838 aa22.01■■□□□ 1.11
CCDC171-206ENST00000474193 PLIN4Q96Q06 1357 aa22■■□□□ 1.11
CCDC171-206ENST00000474193 ORC4O43929 436 aa22■■□□□ 1.11
CCDC171-206ENST00000474193 FDX1P10109 184 aa22■■□□□ 1.11
CCDC171-206ENST00000474193 PCP11498 1178 aaKnown RBP22■■□□□ 1.11
CCDC171-206ENST00000474193 BMP3P12645 472 aa22■■□□□ 1.11
CCDC171-206ENST00000474193 IKQ13123 557 aaPredicted RBP22■■□□□ 1.11
CCDC171-206ENST00000474193 KCTD2Q14681 263 aa22■■□□□ 1.11
CCDC171-206ENST00000474193 BMP2KLQ5H9B9 411 aa22■■□□□ 1.11
CCDC171-206ENST00000474193 RRP12Q5JTH9 1297 aaKnown RBP22■■□□□ 1.11
CCDC171-206ENST00000474193 MFSD6Q6ZSS7 791 aa22■■□□□ 1.11
CCDC171-206ENST00000474193 LRRC47Q8N1G4 583 aaKnown RBP22■■□□□ 1.11
CCDC171-206ENST00000474193 CHURC1Q8WUH1 139 aa22■■□□□ 1.11
CCDC171-206ENST00000474193 RNF41Q9H4P4 317 aaPredicted RBP22■■□□□ 1.11
CCDC171-206ENST00000474193 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22■■□□□ 1.11
CCDC171-206ENST00000474193 NR2E3Q9Y5X4 410 aa22■■□□□ 1.11
CCDC171-206ENST00000474193 ZMYM6O95789 1325 aa22■■□□□ 1.11
CCDC171-206ENST00000474193 MYH4Q9Y623 1939 aa22■■□□□ 1.11
CCDC171-206ENST00000474193 CNGA1P29973 690 aa21.99■■□□□ 1.11
CCDC171-206ENST00000474193 KIFC2Q96AC6 838 aa21.99■■□□□ 1.11
CCDC171-206ENST00000474193 MMP19Q99542 508 aa21.99■■□□□ 1.11
CCDC171-206ENST00000474193 GREB1LQ9C091 1923 aaPredicted RBP21.99■■□□□ 1.11
CCDC171-206ENST00000474193 ZNF213O14771 459 aa21.98■■□□□ 1.11
CCDC171-206ENST00000474193 FOXP2O15409 715 aa21.98■■□□□ 1.11
CCDC171-206ENST00000474193 MSCO60682 206 aa21.98■■□□□ 1.11
CCDC171-206ENST00000474193 SLC1A4P43007 532 aa21.98■■□□□ 1.11
CCDC171-206ENST00000474193 SLC4A3P48751 1232 aa21.98■■□□□ 1.11
CCDC171-206ENST00000474193 ZNF589Q86UQ0 364 aaPredicted RBP21.98■■□□□ 1.11
CCDC171-206ENST00000474193 NPLOC4Q8TAT6 608 aa21.98■■□□□ 1.11
CCDC171-206ENST00000474193 TEX13BQ9BXU2 312 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms