RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 IFNL1Q8IU54 200 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 ARHGEF10LQ9HCE6 1279 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 PDRG1Q9NUG6 133 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 FBXO28Q9NVF7 368 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 TSKSQ9UJT2 592 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 TPCN1Q9ULQ1 816 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 ADAMTS5Q9UNA0 930 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 AGTPBP1Q9UPW5 1226 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 ATAD5Q96QE3 1844 aa12.16□□□□□ -0.46
CASC3-204ENST00000474190 PALM3A6NDB9 673 aaPredicted RBP12.15□□□□□ -0.46
CASC3-204ENST00000474190 MANSC4A6NHS7 340 aaPredicted RBP12.15□□□□□ -0.46
CASC3-204ENST00000474190 CYTH3O43739 400 aa12.15□□□□□ -0.46
CASC3-204ENST00000474190 PEX10O60683 326 aa12.15□□□□□ -0.46
CASC3-204ENST00000474190 CNMDO75829 334 aa12.15□□□□□ -0.46
CASC3-204ENST00000474190 RXRAP19793 462 aa12.15□□□□□ -0.46
CASC3-204ENST00000474190 PDIA3P30101 505 aaKnown RBP12.15□□□□□ -0.46
CASC3-204ENST00000474190 CDC27P30260 824 aa12.15□□□□□ -0.46
CASC3-204ENST00000474190 MAP2K2P36507 400 aa12.15□□□□□ -0.46
CASC3-204ENST00000474190 NEK4P51957 841 aa12.15□□□□□ -0.46
CASC3-204ENST00000474190 USP14P54578 494 aa12.15□□□□□ -0.46
CASC3-204ENST00000474190 ZNF543Q08ER8 600 aa12.15□□□□□ -0.46
CASC3-204ENST00000474190 GRM4Q14833 912 aa12.15□□□□□ -0.46
CASC3-204ENST00000474190 BTNL9Q6UXG8 535 aa12.15□□□□□ -0.46
CASC3-204ENST00000474190 ZNF654Q8IZM8 581 aa12.15□□□□□ -0.46
CASC3-204ENST00000474190 REPS2Q8NFH8 660 aa12.15□□□□□ -0.46
CASC3-204ENST00000474190 LPAR1Q92633 364 aa12.15□□□□□ -0.46
CASC3-204ENST00000474190 CHMP4CQ96CF2 233 aa12.15□□□□□ -0.46
CASC3-204ENST00000474190 CPVLQ9H3G5 476 aa12.15□□□□□ -0.46
CASC3-204ENST00000474190 RPAP3Q9H6T3 665 aaPredicted RBP12.15□□□□□ -0.46
CASC3-204ENST00000474190 PDE4DIPQ5VU43 2346 aa12.15□□□□□ -0.46
CASC3-204ENST00000474190 WDR46O15213 610 aaKnown RBP12.14□□□□□ -0.47
CASC3-204ENST00000474190 PLA2G6O60733 806 aa12.14□□□□□ -0.47
CASC3-204ENST00000474190 GOLGA8HP0CJ92 632 aa12.14□□□□□ -0.47
CASC3-204ENST00000474190 CYP2C8P10632 490 aa12.14□□□□□ -0.47
CASC3-204ENST00000474190 CAP1Q01518 475 aa12.14□□□□□ -0.47
CASC3-204ENST00000474190 GRM1Q13255 1194 aa12.14□□□□□ -0.47
CASC3-204ENST00000474190 RABEP1Q15276 862 aa12.14□□□□□ -0.47
CASC3-204ENST00000474190 NTRK3Q16288 839 aa12.14□□□□□ -0.47
CASC3-204ENST00000474190 ME3Q16798 604 aa12.14□□□□□ -0.47
CASC3-204ENST00000474190 PPP4R3BQ5MIZ7 849 aa12.14□□□□□ -0.47
CASC3-204ENST00000474190 KCTD1Q719H9 257 aa12.14□□□□□ -0.47
CASC3-204ENST00000474190 P2RX7Q99572 595 aaKnown RBP12.14□□□□□ -0.47
CASC3-204ENST00000474190 FEZ1Q99689 392 aa12.14□□□□□ -0.47
CASC3-204ENST00000474190 ASCC2Q9H1I8 757 aaPredicted RBP12.14□□□□□ -0.47
CASC3-204ENST00000474190 KAT14Q9H8E8 782 aa12.14□□□□□ -0.47
CASC3-204ENST00000474190 TXNRD2Q9NNW7 524 aa12.14□□□□□ -0.47
CASC3-204ENST00000474190 SLC45A1Q9Y2W3 748 aa12.14□□□□□ -0.47
CASC3-204ENST00000474190 LOC285556D6RIA3 1793 aa12.14□□□□□ -0.47
CASC3-204ENST00000474190 FRMPD2Q68DX3 1309 aaPredicted RBP12.13□□□□□ -0.47
CASC3-204ENST00000474190 PTPRFP10586 1907 aa12.13□□□□□ -0.47
CASC3-204ENST00000474190 KLF18A0A0U1RQI7 1052 aa12.13□□□□□ -0.47
CASC3-204ENST00000474190 SPDYE16A6NNV3 312 aaPredicted RBP12.13□□□□□ -0.47
CASC3-204ENST00000474190 PDHXO00330 501 aa12.13□□□□□ -0.47
CASC3-204ENST00000474190 DDAH1O94760 285 aa12.13□□□□□ -0.47
CASC3-204ENST00000474190 PLEKHA8P1O95397 391 aa12.13□□□□□ -0.47
CASC3-204ENST00000474190 RCAN1P53805 252 aa12.13□□□□□ -0.47
CASC3-204ENST00000474190 LBX2Q6XYB7 198 aa12.13□□□□□ -0.47
CASC3-204ENST00000474190 GADL1Q6ZQY3 521 aa12.13□□□□□ -0.47
CASC3-204ENST00000474190 FASTKD5Q7L8L6 764 aaKnown RBP12.13□□□□□ -0.47
CASC3-204ENST00000474190 TMTC2Q8N394 836 aa12.13□□□□□ -0.47
CASC3-204ENST00000474190 DCAF4Q8WV16 495 aa12.13□□□□□ -0.47
CASC3-204ENST00000474190 MTMR8Q96EF0 704 aa12.13□□□□□ -0.47
CASC3-204ENST00000474190 MAP3K14Q99558 947 aa12.13□□□□□ -0.47
CASC3-204ENST00000474190 CFHR5Q9BXR6 569 aa12.13□□□□□ -0.47
CASC3-204ENST00000474190 MCOLN1Q9GZU1 580 aa12.13□□□□□ -0.47
CASC3-204ENST00000474190 SH2D4AQ9H788 454 aa12.13□□□□□ -0.47
CASC3-204ENST00000474190 GOPCQ9HD26 462 aa12.13□□□□□ -0.47
CASC3-204ENST00000474190 HTTP42858 3142 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 RLFQ13129 1914 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 USP17L15C9J2P7 530 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 USP17L13C9JLJ4 530 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 USP17L11C9JVI0 530 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 USP17L18D6R9N7 530 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 USP17L22D6RA61 530 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 USP17L17D6RBQ6 530 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 USP17L19D6RCP7 530 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 USP17L20D6RJB6 530 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 DTNBO60941 627 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 CTDNEP1O95476 244 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 BMP3P12645 472 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 DSG3P32926 999 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 ADD1P35611 737 aaKnown RBP12.12□□□□□ -0.47
CASC3-204ENST00000474190 SLC16A2P36021 539 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 SLC1A4P43007 532 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 INHBEP58166 350 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 USP17L24Q0WX57 530 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 SART3Q15020 963 aaKnown RBP12.12□□□□□ -0.47
CASC3-204ENST00000474190 PAXIP1Q6ZW49 1069 aaPredicted RBP12.12□□□□□ -0.47
CASC3-204ENST00000474190 SRBD1Q8N5C6 995 aaKnown RBP12.12□□□□□ -0.47
CASC3-204ENST00000474190 FANCBQ8NB91 859 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 SHISA4Q96DD7 197 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 ATG4CQ96DT6 458 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 ZNF274Q96GC6 653 aaPredicted RBP12.12□□□□□ -0.47
CASC3-204ENST00000474190 UBA5Q9GZZ9 404 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 UPF2Q9HAU5 1272 aaKnown RBP12.12□□□□□ -0.47
CASC3-204ENST00000474190 NCOA5Q9HCD5 579 aaKnown RBP12.12□□□□□ -0.47
CASC3-204ENST00000474190 ZCCHC17Q9NP64 241 aaKnown RBP12.12□□□□□ -0.47
CASC3-204ENST00000474190 RNF186Q9NXI6 227 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 TMOD4Q9NZQ9 345 aa12.12□□□□□ -0.47
CASC3-204ENST00000474190 RBPJLQ9UBG7 517 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms