RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 VAT1LQ9HCJ6 419 aa20.7■□□□□ 0.9
VARS2-206ENST00000473916 A0A087WWV3 80 aa20.69■□□□□ 0.9
VARS2-206ENST00000473916 NPM3O75607 178 aaKnown RBP20.69■□□□□ 0.9
VARS2-206ENST00000473916 GDF11O95390 407 aa20.69■□□□□ 0.9
VARS2-206ENST00000473916 JAG1P78504 1218 aa20.69■□□□□ 0.9
VARS2-206ENST00000473916 DLGAP5Q15398 846 aa20.69■□□□□ 0.9
VARS2-206ENST00000473916 SPECC1Q5M775 1068 aa20.69■□□□□ 0.9
VARS2-206ENST00000473916 NLGN2Q8NFZ4 835 aa20.69■□□□□ 0.9
VARS2-206ENST00000473916 RASGRP4Q8TDF6 673 aa20.69■□□□□ 0.9
VARS2-206ENST00000473916 ZNF70Q9UC06 446 aaPredicted RBP20.69■□□□□ 0.9
VARS2-206ENST00000473916 SRCAPQ6ZRS2 3230 aa20.69■□□□□ 0.9
VARS2-206ENST00000473916 ATRNL1Q5VV63 1379 aa20.69■□□□□ 0.9
VARS2-206ENST00000473916 STXBP3O00186 592 aa20.68■□□□□ 0.9
VARS2-206ENST00000473916 KINO60870 393 aaKnown RBP20.68■□□□□ 0.9
VARS2-206ENST00000473916 RASSF7Q02833 373 aa20.68■□□□□ 0.9
VARS2-206ENST00000473916 RRP1BQ14684 758 aaKnown RBP20.68■□□□□ 0.9
VARS2-206ENST00000473916 CERKLQ49MI3 558 aaPredicted RBP20.68■□□□□ 0.9
VARS2-206ENST00000473916 CDAN1Q8IWY9 1227 aa20.68■□□□□ 0.9
VARS2-206ENST00000473916 SPZ1Q9BXG8 430 aa20.68■□□□□ 0.9
VARS2-206ENST00000473916 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.68■□□□□ 0.9
VARS2-206ENST00000473916 ENTPD3O75355 529 aa20.68■□□□□ 0.9
VARS2-206ENST00000473916 CCDC192P0DO97 292 aa20.68■□□□□ 0.9
VARS2-206ENST00000473916 CMA1P23946 247 aa20.68■□□□□ 0.9
VARS2-206ENST00000473916 PRELPP51888 382 aa20.68■□□□□ 0.9
VARS2-206ENST00000473916 PIK3AP1Q6ZUJ8 805 aa20.68■□□□□ 0.9
VARS2-206ENST00000473916 CSRNP1Q96S65 589 aa20.68■□□□□ 0.9
VARS2-206ENST00000473916 VPS33BQ9H267 617 aa20.68■□□□□ 0.9
VARS2-206ENST00000473916 GPCPD1Q9NPB8 672 aa20.68■□□□□ 0.9
VARS2-206ENST00000473916 SCAF8Q9UPN6 1271 aaKnown RBP20.68■□□□□ 0.9
VARS2-206ENST00000473916 TATDN1Q6P1N9 297 aa20.67■□□□□ 0.9
VARS2-206ENST00000473916 OGFOD1Q8N543 542 aa20.67■□□□□ 0.9
VARS2-206ENST00000473916 PIGSQ96S52 555 aa20.67■□□□□ 0.9
VARS2-206ENST00000473916 BRMS1Q9HCU9 246 aa20.67■□□□□ 0.9
VARS2-206ENST00000473916 FBXO2Q9UK22 296 aaPredicted RBP20.67■□□□□ 0.9
VARS2-206ENST00000473916 HDAC9Q9UKV0 1011 aa20.67■□□□□ 0.9
VARS2-206ENST00000473916 CNTNAP1P78357 1384 aa20.67■□□□□ 0.9
VARS2-206ENST00000473916 SNHG28P0DPA3 235 aa20.66■□□□□ 0.9
VARS2-206ENST00000473916 SEPT2Q15019 361 aa20.66■□□□□ 0.9
VARS2-206ENST00000473916 LZTS2Q9BRK4 669 aa20.66■□□□□ 0.9
VARS2-206ENST00000473916 TRIM34Q9BYJ4 488 aa20.66■□□□□ 0.9
VARS2-206ENST00000473916 TTBK2Q6IQ55 1244 aa20.66■□□□□ 0.9
VARS2-206ENST00000473916 JMYQ8N9B5 988 aa20.66■□□□□ 0.9
VARS2-206ENST00000473916 KRI1Q8N9T8 703 aaKnown RBP20.66■□□□□ 0.9
VARS2-206ENST00000473916 VEZTQ9HBM0 779 aa20.66■□□□□ 0.9
VARS2-206ENST00000473916 BARHL2Q9NY43 387 aa20.66■□□□□ 0.9
VARS2-206ENST00000473916 CD2APQ9Y5K6 639 aa20.66■□□□□ 0.9
VARS2-206ENST00000473916 ARFGEF1Q9Y6D6 1849 aa20.66■□□□□ 0.9
VARS2-206ENST00000473916 ZNF202O95125 648 aa20.65■□□□□ 0.9
VARS2-206ENST00000473916 EEF2P13639 858 aaKnown RBP20.65■□□□□ 0.9
VARS2-206ENST00000473916 ZNF174Q15697 407 aa20.65■□□□□ 0.9
VARS2-206ENST00000473916 SPDYE2Q495Y8 402 aa20.65■□□□□ 0.9
VARS2-206ENST00000473916 RESP18Q5W5W9 173 aa20.65■□□□□ 0.9
VARS2-206ENST00000473916 METTL16Q86W50 562 aaKnown RBP20.65■□□□□ 0.9
VARS2-206ENST00000473916 SIAH1Q8IUQ4 282 aa20.65■□□□□ 0.9
VARS2-206ENST00000473916 BLIDQ8IZY5 108 aa20.65■□□□□ 0.9
VARS2-206ENST00000473916 AGBL3Q8NEM8 1001 aa20.65■□□□□ 0.9
VARS2-206ENST00000473916 CCDC17Q96LX7 622 aa20.65■□□□□ 0.9
VARS2-206ENST00000473916 SH3GLB2Q9NR46 395 aa20.65■□□□□ 0.9
VARS2-206ENST00000473916 TRIM75PA6NK02 468 aa20.65■□□□□ 0.9
VARS2-206ENST00000473916 CUTAO60888 179 aa20.65■□□□□ 0.9
VARS2-206ENST00000473916 EGFRP00533 1210 aa20.65■□□□□ 0.9
VARS2-206ENST00000473916 ZNF543Q08ER8 600 aa20.65■□□□□ 0.9
VARS2-206ENST00000473916 NBPF9Q3BBW0 867 aa20.65■□□□□ 0.9
VARS2-206ENST00000473916 CIAPIN1Q6FI81 312 aa20.65■□□□□ 0.9
VARS2-206ENST00000473916 FOXP4Q8IVH2 680 aaPredicted RBP20.65■□□□□ 0.9
VARS2-206ENST00000473916 TMOD2Q9NZR1 351 aa20.65■□□□□ 0.9
VARS2-206ENST00000473916 PCDHA4Q9UN74 947 aa20.65■□□□□ 0.9
VARS2-206ENST00000473916 HPSEQ9Y251 543 aa20.65■□□□□ 0.9
VARS2-206ENST00000473916 M0R2N6 131 aa20.64■□□□□ 0.89
VARS2-206ENST00000473916 RAD21O60216 631 aa20.64■□□□□ 0.89
VARS2-206ENST00000473916 ANO6Q4KMQ2 910 aa20.64■□□□□ 0.89
VARS2-206ENST00000473916 KCTD1Q719H9 257 aa20.64■□□□□ 0.89
VARS2-206ENST00000473916 JDP2Q8WYK2 163 aa20.64■□□□□ 0.89
VARS2-206ENST00000473916 RRP36Q96EU6 259 aaKnown RBP20.64■□□□□ 0.89
VARS2-206ENST00000473916 RIOX1Q9H6W3 641 aa20.64■□□□□ 0.89
VARS2-206ENST00000473916 COL2A1P02458 1487 aaPredicted RBP20.64■□□□□ 0.89
VARS2-206ENST00000473916 PTPREP23469 700 aa20.63■□□□□ 0.89
VARS2-206ENST00000473916 SLC16A2P36021 539 aa20.63■□□□□ 0.89
VARS2-206ENST00000473916 ASPRV1Q53RT3 343 aa20.63■□□□□ 0.89
VARS2-206ENST00000473916 TTC38Q5R3I4 469 aa20.63■□□□□ 0.89
VARS2-206ENST00000473916 TMEM39BQ9GZU3 492 aa20.63■□□□□ 0.89
VARS2-206ENST00000473916 CALML3P27482 149 aa20.63■□□□□ 0.89
VARS2-206ENST00000473916 ABCB5Q2M3G0 1257 aa20.63■□□□□ 0.89
VARS2-206ENST00000473916 USP49Q70CQ1 688 aa20.63■□□□□ 0.89
VARS2-206ENST00000473916 PCDHA6Q9UN73 950 aa20.63■□□□□ 0.89
VARS2-206ENST00000473916 PCDHA8Q9Y5H6 950 aa20.63■□□□□ 0.89
VARS2-206ENST00000473916 GH2P01242 217 aa20.62■□□□□ 0.89
VARS2-206ENST00000473916 SYKP43405 635 aa20.62■□□□□ 0.89
VARS2-206ENST00000473916 CCDC96Q2M329 555 aa20.62■□□□□ 0.89
VARS2-206ENST00000473916 SASS6Q6UVJ0 657 aa20.62■□□□□ 0.89
VARS2-206ENST00000473916 PPP1R9BQ96SB3 815 aa20.62■□□□□ 0.89
VARS2-206ENST00000473916 SDF4Q9BRK5 362 aa20.62■□□□□ 0.89
VARS2-206ENST00000473916 DNAJC25Q9H1X3 360 aa20.62■□□□□ 0.89
VARS2-206ENST00000473916 WNT10BO00744 389 aa20.61■□□□□ 0.89
VARS2-206ENST00000473916 NAPAP54920 295 aa20.61■□□□□ 0.89
VARS2-206ENST00000473916 ICA1Q05084 483 aa20.61■□□□□ 0.89
VARS2-206ENST00000473916 CCDC173Q0VFZ6 552 aa20.61■□□□□ 0.89
VARS2-206ENST00000473916 ZBED3Q96IU2 234 aaPredicted RBP20.61■□□□□ 0.89
VARS2-206ENST00000473916 SEC63Q9UGP8 760 aaKnown RBP20.61■□□□□ 0.89
VARS2-206ENST00000473916 NOL7Q9UMY1 257 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms