RNA–Protein interactions for RNA: ENST00000473869.5

TARDBP-206, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,946 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-206	ENST00000473869	CYTH3	O43739	400 aa		12.5	□□□□□ -0.41
TARDBP-206	ENST00000473869	EPS15	P42566	896 aa		12.5	□□□□□ -0.41
TARDBP-206	ENST00000473869	RRP1B	Q14684	758 aa	Known RBP	12.5	□□□□□ -0.41
TARDBP-206	ENST00000473869	CCDC96	Q2M329	555 aa		12.5	□□□□□ -0.41
TARDBP-206	ENST00000473869	NOSTRIN	Q8IVI9	506 aa		12.5	□□□□□ -0.41
TARDBP-206	ENST00000473869	RRP36	Q96EU6	259 aa	Known RBP	12.5	□□□□□ -0.41
TARDBP-206	ENST00000473869	USP28	Q96RU2	1077 aa		12.5	□□□□□ -0.41
TARDBP-206	ENST00000473869	PHF20	Q9BVI0	1012 aa		12.5	□□□□□ -0.41
TARDBP-206	ENST00000473869	SH3GLB2	Q9NR46	395 aa		12.5	□□□□□ -0.41
TARDBP-206	ENST00000473869	SEC63	Q9UGP8	760 aa	Known RBP	12.5	□□□□□ -0.41
TARDBP-206	ENST00000473869	ISY1	Q9ULR0	285 aa	Known RBP	12.5	□□□□□ -0.41
TARDBP-206	ENST00000473869	ASTN2	O75129	1339 aa	Predicted RBP	12.5	□□□□□ -0.41
TARDBP-206	ENST00000473869	KRT2	P35908	639 aa		12.5	□□□□□ -0.41
TARDBP-206	ENST00000473869	MAP3K10	Q02779	954 aa		12.5	□□□□□ -0.41
TARDBP-206	ENST00000473869	ZNF543	Q08ER8	600 aa		12.5	□□□□□ -0.41
TARDBP-206	ENST00000473869	TPRN	Q4KMQ1	711 aa		12.5	□□□□□ -0.41
TARDBP-206	ENST00000473869	ANGEL2	Q5VTE6	544 aa	Known RBP	12.5	□□□□□ -0.41
TARDBP-206	ENST00000473869	TRPM4	Q8TD43	1214 aa		12.5	□□□□□ -0.41
TARDBP-206	ENST00000473869	TEPSIN	Q96N21	525 aa		12.5	□□□□□ -0.41
TARDBP-206	ENST00000473869	ARHGEF10L	Q9HCE6	1279 aa		12.5	□□□□□ -0.41
TARDBP-206	ENST00000473869	GPCPD1	Q9NPB8	672 aa		12.5	□□□□□ -0.41
TARDBP-206	ENST00000473869	CALML3	P27482	149 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	CAP2	P40123	477 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	SLC1A4	P43007	532 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	NLRP5	P59047	1200 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	JAG1	P78504	1218 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	SLFN13	Q68D06	897 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	CAVIN1	Q6NZI2	390 aa	Known RBP	12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	SIAH1	Q8IUQ4	282 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	CCDC148	Q8NFR7	591 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	DCAF4	Q8WV16	495 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	HOOK2	Q96ED9	719 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	UBA5	Q9GZZ9	404 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	CPVL	Q9H3G5	476 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	VAT1L	Q9HCJ6	419 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	RTEL1	Q9NZ71	1219 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	RCOR1	Q9UKL0	485 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	ZBTB21	Q9ULJ3	1066 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	SYNPO2	Q9UMS6	1093 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	GSE1	Q14687	1217 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	SLC35G1	Q2M3R5	365 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	DCAF15	Q66K64	600 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	HEATR3	Q7Z4Q2	680 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	HOMER1	Q86YM7	354 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	FAM177A1	Q8N128	213 aa	Predicted RBP	12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	GMCL1P1	Q8NEA9	526 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	SYAP1	Q96A49	352 aa	Predicted RBP	12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	FTO	Q9C0B1	505 aa	Known RBP eCLIP	12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	RIOX1	Q9H6W3	641 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869	POLR3E	Q9NVU0	708 aa		12.49	□□□□□ -0.41
TARDBP-206	ENST00000473869		F5H6K3	240 aa		12.48	□□□□□ -0.41
TARDBP-206	ENST00000473869	ASNS	P08243	561 aa		12.48	□□□□□ -0.41
TARDBP-206	ENST00000473869	KLRC3	Q07444	240 aa		12.48	□□□□□ -0.41
TARDBP-206	ENST00000473869	NR5A1	Q13285	461 aa		12.48	□□□□□ -0.41
TARDBP-206	ENST00000473869	STK38	Q15208	465 aa		12.48	□□□□□ -0.41
TARDBP-206	ENST00000473869	ANO1	Q5XXA6	986 aa		12.48	□□□□□ -0.41
TARDBP-206	ENST00000473869	KCTD1	Q719H9	257 aa		12.48	□□□□□ -0.41
TARDBP-206	ENST00000473869	OXER1	Q8TDS5	423 aa		12.48	□□□□□ -0.41
TARDBP-206	ENST00000473869	CCDC12	Q8WUD4	166 aa	Predicted RBP	12.48	□□□□□ -0.41
TARDBP-206	ENST00000473869	SHISA4	Q96DD7	197 aa		12.48	□□□□□ -0.41
TARDBP-206	ENST00000473869	ADARB2	Q9NS39	739 aa	Known RBP	12.48	□□□□□ -0.41
TARDBP-206	ENST00000473869	BARHL2	Q9NY43	387 aa		12.48	□□□□□ -0.41
TARDBP-206	ENST00000473869	GGA3	Q9NZ52	723 aa		12.48	□□□□□ -0.41
TARDBP-206	ENST00000473869	ZC3H4	Q9UPT8	1303 aa	Known RBP	12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	GLTPD2	A6NH11	291 aa		12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	YEATS4	O95619	227 aa		12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	VEGFA	P15692	232 aa	Predicted RBP	12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	SF3A1	Q15459	793 aa	Known RBP	12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	RILPL1	Q5EBL4	403 aa		12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	WWC2	Q6AWC2	1192 aa		12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	KCNG4	Q8TDN1	519 aa		12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	PIGS	Q96S52	555 aa		12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	SH2D4A	Q9H788	454 aa		12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	GOPC	Q9HD26	462 aa		12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	PPP2R3B	Q9Y5P8	575 aa		12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	CLIC4	Q9Y696	253 aa		12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	hCG_1984214	I3L0E3	225 aa		12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	ME1	P48163	572 aa		12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	NASP	P49321	788 aa	Predicted RBP	12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	HIRA	P54198	1017 aa	Predicted RBP	12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	NBPF12	Q5TAG4	269 aa	Predicted RBP	12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	TTBK2	Q6IQ55	1244 aa		12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	GALNT17	Q6IS24	598 aa		12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	ADGRF4	Q8IZF3	695 aa		12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	ZNF713	Q8N859	430 aa	Predicted RBP	12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	LINC00301	Q8NCQ3	95 aa		12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869	GMCL1	Q96IK5	515 aa		12.47	□□□□□ -0.41
TARDBP-206	ENST00000473869		A0A1W2PRG0	241 aa		12.46	□□□□□ -0.42
TARDBP-206	ENST00000473869	PHF20L1	A8MW92	1017 aa		12.46	□□□□□ -0.42
TARDBP-206	ENST00000473869	STXBP3	O00186	592 aa		12.46	□□□□□ -0.42
TARDBP-206	ENST00000473869	SPTLC2	O15270	562 aa		12.46	□□□□□ -0.42
TARDBP-206	ENST00000473869	NDUFB10	O96000	172 aa		12.46	□□□□□ -0.42
TARDBP-206	ENST00000473869	NAPA	P54920	295 aa		12.46	□□□□□ -0.42
TARDBP-206	ENST00000473869	POTED	Q86YR6	584 aa		12.46	□□□□□ -0.42
TARDBP-206	ENST00000473869	BICD2	Q8TD16	824 aa		12.46	□□□□□ -0.42
TARDBP-206	ENST00000473869	ZNF341	Q9BYN7	854 aa		12.46	□□□□□ -0.42
TARDBP-206	ENST00000473869	GINM1	Q9NU53	330 aa		12.46	□□□□□ -0.42
TARDBP-206	ENST00000473869	PCDHA4	Q9UN74	947 aa		12.46	□□□□□ -0.42
TARDBP-206	ENST00000473869	TMX2	Q9Y320	296 aa		12.46	□□□□□ -0.42

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