RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 DNAJC25Q9H1X3 360 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 TAOK3Q9H2K8 898 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 USP25Q9UHP3 1055 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 ZNRF3Q9ULT6 936 aa7.16□□□□□ -1.26
CLK1-210ENST00000473565 A0A1W2PQ27 194 aa7.15□□□□□ -1.26
CLK1-210ENST00000473565 A0A1W2PQ64 194 aa7.15□□□□□ -1.26
CLK1-210ENST00000473565 A0A1W2PQD8 194 aa7.15□□□□□ -1.26
CLK1-210ENST00000473565 CCDC192P0DO97 292 aa7.15□□□□□ -1.26
CLK1-210ENST00000473565 DLGAP5Q15398 846 aa7.15□□□□□ -1.26
CLK1-210ENST00000473565 NBPF9Q3BBW0 867 aa7.15□□□□□ -1.26
CLK1-210ENST00000473565 CERKLQ49MI3 558 aaPredicted RBP7.15□□□□□ -1.26
CLK1-210ENST00000473565 CCDC178Q5BJE1 867 aa7.15□□□□□ -1.26
CLK1-210ENST00000473565 RILPL1Q5EBL4 403 aa7.15□□□□□ -1.26
CLK1-210ENST00000473565 ISM2Q6H9L7 571 aa7.15□□□□□ -1.26
CLK1-210ENST00000473565 LUZP1Q86V48 1076 aa7.15□□□□□ -1.26
CLK1-210ENST00000473565 CSRNP1Q96S65 589 aa7.15□□□□□ -1.26
CLK1-210ENST00000473565 SDF4Q9BRK5 362 aa7.15□□□□□ -1.26
CLK1-210ENST00000473565 TRIM34Q9BYJ4 488 aa7.15□□□□□ -1.26
CLK1-210ENST00000473565 SWAP70Q9UH65 585 aa7.15□□□□□ -1.26
CLK1-210ENST00000473565 BRCA1P38398 1863 aaKnown RBP7.15□□□□□ -1.27
CLK1-210ENST00000473565 STXBP3O00186 592 aa7.15□□□□□ -1.27
CLK1-210ENST00000473565 BIN1O00499 593 aa7.15□□□□□ -1.27
CLK1-210ENST00000473565 AP5Z1O43299 807 aa7.15□□□□□ -1.27
CLK1-210ENST00000473565 ZNF202O95125 648 aa7.15□□□□□ -1.27
CLK1-210ENST00000473565 TTLL1O95922 423 aa7.15□□□□□ -1.27
CLK1-210ENST00000473565 EEF2P13639 858 aaKnown RBP7.15□□□□□ -1.27
CLK1-210ENST00000473565 TGFB2P61812 414 aa7.15□□□□□ -1.27
CLK1-210ENST00000473565 CCDC96Q2M329 555 aa7.15□□□□□ -1.27
CLK1-210ENST00000473565 RBM43Q6ZSC3 357 aaKnown RBP7.15□□□□□ -1.27
CLK1-210ENST00000473565 PDILTQ8N807 584 aa7.15□□□□□ -1.27
CLK1-210ENST00000473565 NUP88Q99567 741 aaPredicted RBP7.15□□□□□ -1.27
CLK1-210ENST00000473565 MRIQ9BWK5 157 aa7.15□□□□□ -1.27
CLK1-210ENST00000473565 TMEM39BQ9GZU3 492 aa7.15□□□□□ -1.27
CLK1-210ENST00000473565 PI4KBQ9UBF8 816 aa7.15□□□□□ -1.27
CLK1-210ENST00000473565 ZNF70Q9UC06 446 aaPredicted RBP7.15□□□□□ -1.27
CLK1-210ENST00000473565 FBXO2Q9UK22 296 aaPredicted RBP7.15□□□□□ -1.27
CLK1-210ENST00000473565 PLIN4Q96Q06 1357 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 FOXN1O15353 648 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 PPP6R2O75170 966 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 CMA1P23946 247 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 PTGER2P43116 358 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 NOVP48745 357 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 GNAQP50148 359 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 SASS6Q6UVJ0 657 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 C11orf57Q6ZUT1 292 aaPredicted RBP7.14□□□□□ -1.27
CLK1-210ENST00000473565 MIGA2Q7L4E1 593 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 CCDC125Q86Z20 511 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 OGFOD1Q8N543 542 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 UPF1Q92900 1129 aaKnown RBP eCLIP7.14□□□□□ -1.27
CLK1-210ENST00000473565 COA7Q96BR5 231 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 SGIP1Q9BQI5 828 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 ASTN2O75129 1339 aaPredicted RBP7.14□□□□□ -1.27
CLK1-210ENST00000473565 FER1L6Q2WGJ9 1857 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 TRIM75PA6NK02 468 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 GH2P01242 217 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 TAL1P17542 331 aaPredicted RBP7.14□□□□□ -1.27
CLK1-210ENST00000473565 MCM7P33993 719 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 SYKP43405 635 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 NAPAP54920 295 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 SNAP25P60880 206 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 TTC38Q5R3I4 469 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 CCDC84Q86UT8 332 aaPredicted RBP7.14□□□□□ -1.27
CLK1-210ENST00000473565 SIAH1Q8IUQ4 282 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 BLIDQ8IZY5 108 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 KRI1Q8N9T8 703 aaKnown RBP7.14□□□□□ -1.27
CLK1-210ENST00000473565 EHD4Q9H223 541 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 DHX36Q9H2U1 1008 aaKnown RBP7.14□□□□□ -1.27
CLK1-210ENST00000473565 BRMS1Q9HCU9 246 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 RESP18Q5W5W9 173 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 GRAMD1CQ8IYS0 662 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 RGS22Q8NE09 1264 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 JDP2Q8WYK2 163 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 ANP32BQ92688 251 aaKnown RBP7.14□□□□□ -1.27
CLK1-210ENST00000473565 CSRNP2Q9H175 543 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 CBX8Q9HC52 389 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 BARHL2Q9NY43 387 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 GJA3Q9Y6H8 435 aa7.14□□□□□ -1.27
CLK1-210ENST00000473565 GREB1LQ9C091 1923 aaPredicted RBP7.14□□□□□ -1.27
CLK1-210ENST00000473565 CNTNAP1P78357 1384 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 USP17L10C9JJH3 530 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 CUTAO60888 179 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 PTPREP23469 700 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 ZNF543Q08ER8 600 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 PTGDRQ13258 359 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 INF2Q27J81 1249 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 ABCB5Q2M3G0 1257 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 LONRF3Q496Y0 759 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 CIAPIN1Q6FI81 312 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 SPICE1Q8N0Z3 855 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 JMYQ8N9B5 988 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 RRP36Q96EU6 259 aaKnown RBP7.13□□□□□ -1.27
CLK1-210ENST00000473565 EPSTI1Q96J88 318 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 SPZ1Q9BXG8 430 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.13□□□□□ -1.27
CLK1-210ENST00000473565 TMEM260Q9NX78 707 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 TMOD2Q9NZR1 351 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 HDAC9Q9UKV0 1011 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 PCDHA6Q9UN73 950 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 PCDHA4Q9UN74 947 aa7.13□□□□□ -1.27
CLK1-210ENST00000473565 PCDHA8Q9Y5H6 950 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms