RNA–Protein interactions for RNA: ENST00000473405.1

CCDC88B-206, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best)

Gene CCDC88B, Length 783 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-206ENST00000473405 ADAMTS5Q9UNA0 930 aa22.49■■□□□ 1.19
CCDC88B-206ENST00000473405 CYP2C19P33261 490 aa22.48■■□□□ 1.19
CCDC88B-206ENST00000473405 TDO2P48775 406 aa22.48■■□□□ 1.19
CCDC88B-206ENST00000473405 PLS1Q14651 629 aa22.48■■□□□ 1.19
CCDC88B-206ENST00000473405 C7orf61Q8IZ16 206 aa22.48■■□□□ 1.19
CCDC88B-206ENST00000473405 TRPV1Q8NER1 839 aa22.48■■□□□ 1.19
CCDC88B-206ENST00000473405 MROH8Q9H579 483 aa22.48■■□□□ 1.19
CCDC88B-206ENST00000473405 GOPCQ9HD26 462 aa22.48■■□□□ 1.19
CCDC88B-206ENST00000473405 IGKV6D-41A0A0C4DH26 115 aa22.47■■□□□ 1.19
CCDC88B-206ENST00000473405 COBLO75128 1261 aa22.47■■□□□ 1.19
CCDC88B-206ENST00000473405 CYBAP13498 195 aa22.47■■□□□ 1.19
CCDC88B-206ENST00000473405 FAM83BQ5T0W9 1011 aa22.47■■□□□ 1.19
CCDC88B-206ENST00000473405 OLFML2BQ68BL8 750 aa22.47■■□□□ 1.19
CCDC88B-206ENST00000473405 SAMD1Q6SPF0 538 aaPredicted RBP22.47■■□□□ 1.19
CCDC88B-206ENST00000473405 FSD1Q9BTV5 496 aa22.47■■□□□ 1.19
CCDC88B-206ENST00000473405 MKNK2Q9HBH9 465 aa22.47■■□□□ 1.19
CCDC88B-206ENST00000473405 COL6A3P12111 3177 aa22.46■■□□□ 1.19
CCDC88B-206ENST00000473405 LRRFIP1Q32MZ4 808 aaKnown RBP22.46■■□□□ 1.19
CCDC88B-206ENST00000473405 ZMYM1Q5SVZ6 1142 aa22.46■■□□□ 1.19
CCDC88B-206ENST00000473405 DPP9Q86TI2 863 aa22.46■■□□□ 1.19
CCDC88B-206ENST00000473405 NCAPG2Q86XI2 1143 aa22.46■■□□□ 1.19
CCDC88B-206ENST00000473405 IFNL3Q8IZI9 196 aa22.46■■□□□ 1.19
CCDC88B-206ENST00000473405 ABRAQ8N0Z2 381 aa22.46■■□□□ 1.19
CCDC88B-206ENST00000473405 NYAP2Q9P242 653 aa22.46■■□□□ 1.19
CCDC88B-206ENST00000473405 DDX20Q9UHI6 824 aaKnown RBP22.46■■□□□ 1.19
CCDC88B-206ENST00000473405 PPP1R9AQ9ULJ8 1098 aa22.46■■□□□ 1.19
CCDC88B-206ENST00000473405 PATL2C9JE40 543 aaKnown RBP22.45■■□□□ 1.18
CCDC88B-206ENST00000473405 VWA5AO00534 786 aa22.45■■□□□ 1.18
CCDC88B-206ENST00000473405 PRDM1O75626 825 aa22.45■■□□□ 1.18
CCDC88B-206ENST00000473405 APPP05067 770 aa22.45■■□□□ 1.18
CCDC88B-206ENST00000473405 REPS2Q8NFH8 660 aa22.45■■□□□ 1.18
CCDC88B-206ENST00000473405 NUP88Q99567 741 aaPredicted RBP22.45■■□□□ 1.18
CCDC88B-206ENST00000473405 ZNF214Q9UL59 606 aaPredicted RBP22.45■■□□□ 1.18
CCDC88B-206ENST00000473405 PLIN4Q96Q06 1357 aa22.45■■□□□ 1.18
CCDC88B-206ENST00000473405 FOXP2O15409 715 aa22.44■■□□□ 1.18
CCDC88B-206ENST00000473405 RAD21O60216 631 aa22.44■■□□□ 1.18
CCDC88B-206ENST00000473405 SLC25A27O95847 323 aa22.43■■□□□ 1.18
CCDC88B-206ENST00000473405 NDUFB10O96000 172 aa22.43■■□□□ 1.18
CCDC88B-206ENST00000473405 HDAC1Q13547 482 aaPredicted RBP22.43■■□□□ 1.18
CCDC88B-206ENST00000473405 STAP2Q9UGK3 403 aa22.43■■□□□ 1.18
CCDC88B-206ENST00000473405 ZMYND8Q9ULU4 1186 aaPredicted RBP22.43■■□□□ 1.18
CCDC88B-206ENST00000473405 F5H6K3 240 aa22.42■■□□□ 1.18
CCDC88B-206ENST00000473405 MSCO60682 206 aa22.42■■□□□ 1.18
CCDC88B-206ENST00000473405 FCER1AP12319 257 aa22.42■■□□□ 1.18
CCDC88B-206ENST00000473405 CNGA1P29973 690 aa22.42■■□□□ 1.18
CCDC88B-206ENST00000473405 KLRC3Q07444 240 aa22.42■■□□□ 1.18
CCDC88B-206ENST00000473405 LRRC26Q2I0M4 334 aa22.42■■□□□ 1.18
CCDC88B-206ENST00000473405 ANKRD45Q5TZF3 282 aa22.42■■□□□ 1.18
CCDC88B-206ENST00000473405 RIOX2Q8IUF8 465 aa22.42■■□□□ 1.18
CCDC88B-206ENST00000473405 CEP95Q96GE4 821 aa22.42■■□□□ 1.18
CCDC88B-206ENST00000473405 MAML3Q96JK9 1138 aa22.42■■□□□ 1.18
CCDC88B-206ENST00000473405 GDF15Q99988 308 aa22.41■■□□□ 1.18
CCDC88B-206ENST00000473405 SLF1Q9BQI6 1058 aa22.41■■□□□ 1.18
CCDC88B-206ENST00000473405 NACAP1Q9BZK3 213 aa22.41■■□□□ 1.18
CCDC88B-206ENST00000473405 ZNF287Q9HBT7 754 aa22.41■■□□□ 1.18
CCDC88B-206ENST00000473405 MTMR4Q9NYA4 1195 aa22.41■■□□□ 1.18
CCDC88B-206ENST00000473405 CLIP2Q9UDT6 1046 aa22.41■■□□□ 1.18
CCDC88B-206ENST00000473405 SMCHD1A6NHR9 2005 aa22.4■■□□□ 1.18
CCDC88B-206ENST00000473405 A0A1W2PPC1 479 aa22.4■■□□□ 1.18
CCDC88B-206ENST00000473405 SYN1P17600 705 aa22.4■■□□□ 1.18
CCDC88B-206ENST00000473405 STAT3P40763 770 aa22.4■■□□□ 1.18
CCDC88B-206ENST00000473405 CCDC129Q6ZRS4 1044 aa22.4■■□□□ 1.18
CCDC88B-206ENST00000473405 ZNF444Q8N0Y2 327 aaPredicted RBP22.4■■□□□ 1.18
CCDC88B-206ENST00000473405 MKL1Q969V6 931 aa22.4■■□□□ 1.18
CCDC88B-206ENST00000473405 NAPBQ9H115 298 aa22.4■■□□□ 1.18
CCDC88B-206ENST00000473405 SLC5A4Q9NY91 659 aa22.4■■□□□ 1.18
CCDC88B-206ENST00000473405 PGK2P07205 417 aa22.39■■□□□ 1.17
CCDC88B-206ENST00000473405 PPARAQ07869 468 aa22.39■■□□□ 1.17
CCDC88B-206ENST00000473405 YTHDC1Q96MU7 727 aaKnown RBP22.39■■□□□ 1.17
CCDC88B-206ENST00000473405 MMP19Q99542 508 aa22.39■■□□□ 1.17
CCDC88B-206ENST00000473405 SYNPO2Q9UMS6 1093 aa22.39■■□□□ 1.17
CCDC88B-206ENST00000473405 LTBP2Q14767 1821 aa22.38■■□□□ 1.17
CCDC88B-206ENST00000473405 DNM1LO00429 736 aa22.38■■□□□ 1.17
CCDC88B-206ENST00000473405 SEPT4O43236 478 aa22.38■■□□□ 1.17
CCDC88B-206ENST00000473405 PDE1AP54750 535 aa22.38■■□□□ 1.17
CCDC88B-206ENST00000473405 PDE4BQ07343 736 aa22.38■■□□□ 1.17
CCDC88B-206ENST00000473405 LRRC47Q8N1G4 583 aaKnown RBP22.38■■□□□ 1.17
CCDC88B-206ENST00000473405 GMCL1P1Q8NEA9 526 aa22.38■■□□□ 1.17
CCDC88B-206ENST00000473405 NEDD1Q8NHV4 660 aa22.38■■□□□ 1.17
CCDC88B-206ENST00000473405 TTLL1O95922 423 aa22.37■■□□□ 1.17
CCDC88B-206ENST00000473405 BMP8BP34820 402 aa22.37■■□□□ 1.17
CCDC88B-206ENST00000473405 COPB2P35606 906 aa22.37■■□□□ 1.17
CCDC88B-206ENST00000473405 FAM47AQ5JRC9 791 aa22.37■■□□□ 1.17
CCDC88B-206ENST00000473405 PRAMEF19Q5SWL8 479 aa22.37■■□□□ 1.17
CCDC88B-206ENST00000473405 EVI5LQ96CN4 794 aa22.37■■□□□ 1.17
CCDC88B-206ENST00000473405 TEX13BQ9BXU2 312 aa22.37■■□□□ 1.17
CCDC88B-206ENST00000473405 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.37■■□□□ 1.17
CCDC88B-206ENST00000473405 SOX1O00570 391 aaPredicted RBP22.36■■□□□ 1.17
CCDC88B-206ENST00000473405 TSPY3P0CV98 308 aa22.36■■□□□ 1.17
CCDC88B-206ENST00000473405 TSPY8P0CW00 308 aa22.36■■□□□ 1.17
CCDC88B-206ENST00000473405 MAGEA10P43363 369 aaPredicted RBP22.36■■□□□ 1.17
CCDC88B-206ENST00000473405 KCTD2Q14681 263 aa22.36■■□□□ 1.17
CCDC88B-206ENST00000473405 ZNF792Q3KQV3 632 aa22.36■■□□□ 1.17
CCDC88B-206ENST00000473405 VPS53Q5VIR6 699 aa22.36■■□□□ 1.17
CCDC88B-206ENST00000473405 ANO1Q5XXA6 986 aa22.36■■□□□ 1.17
CCDC88B-206ENST00000473405 SNRNP48Q6IEG0 339 aaKnown RBP22.36■■□□□ 1.17
CCDC88B-206ENST00000473405 PRPF38AQ8NAV1 312 aaKnown RBP22.36■■□□□ 1.17
CCDC88B-206ENST00000473405 SENP6Q9GZR1 1112 aaPredicted RBP22.36■■□□□ 1.17
CCDC88B-206ENST00000473405 ZBTB47Q9UFB7 747 aaPredicted RBP22.36■■□□□ 1.17
CCDC88B-206ENST00000473405 RIPK3Q9Y572 518 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms