RNA–Protein interactions for RNA: ENST00000473339.1

PTK7-211, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-211ENST00000473339 NKX2-3Q8TAU0 364 aa19.3■□□□□ 0.68
PTK7-211ENST00000473339 DEFB118Q96PH6 123 aa19.3■□□□□ 0.68
PTK7-211ENST00000473339 NUP88Q99567 741 aaPredicted RBP19.3■□□□□ 0.68
PTK7-211ENST00000473339 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.3■□□□□ 0.68
PTK7-211ENST00000473339 IL17RBQ9NRM6 502 aa19.3■□□□□ 0.68
PTK7-211ENST00000473339 RPTORQ8N122 1335 aa19.29■□□□□ 0.68
PTK7-211ENST00000473339 SLC15A5A6NIM6 579 aa19.29■□□□□ 0.68
PTK7-211ENST00000473339 NDUFB10O96000 172 aa19.29■□□□□ 0.68
PTK7-211ENST00000473339 SDSP20132 328 aa19.29■□□□□ 0.68
PTK7-211ENST00000473339 RGS2P41220 211 aa19.29■□□□□ 0.68
PTK7-211ENST00000473339 CTDSPL2Q05D32 466 aa19.29■□□□□ 0.68
PTK7-211ENST00000473339 CACNB2Q08289 660 aaPredicted RBP19.29■□□□□ 0.68
PTK7-211ENST00000473339 FAM83BQ5T0W9 1011 aa19.29■□□□□ 0.68
PTK7-211ENST00000473339 ZNF444Q8N0Y2 327 aaPredicted RBP19.29■□□□□ 0.68
PTK7-211ENST00000473339 MB21D1Q8N884 522 aa19.29■□□□□ 0.68
PTK7-211ENST00000473339 SHCBP1Q8NEM2 672 aa19.29■□□□□ 0.68
PTK7-211ENST00000473339 NPLOC4Q8TAT6 608 aa19.29■□□□□ 0.68
PTK7-211ENST00000473339 NBPF3Q9H094 633 aa19.29■□□□□ 0.68
PTK7-211ENST00000473339 CLIP2Q9UDT6 1046 aa19.29■□□□□ 0.68
PTK7-211ENST00000473339 PPP1R9AQ9ULJ8 1098 aa19.29■□□□□ 0.68
PTK7-211ENST00000473339 VWA5AO00534 786 aa19.28■□□□□ 0.68
PTK7-211ENST00000473339 HSPD1P10809 573 aaKnown RBP19.28■□□□□ 0.68
PTK7-211ENST00000473339 ERCC3P19447 782 aa19.28■□□□□ 0.68
PTK7-211ENST00000473339 APBA2Q99767 749 aa19.28■□□□□ 0.68
PTK7-211ENST00000473339 GOPCQ9HD26 462 aa19.28■□□□□ 0.68
PTK7-211ENST00000473339 ZNF214Q9UL59 606 aaPredicted RBP19.28■□□□□ 0.68
PTK7-211ENST00000473339 COBLO75128 1261 aa19.27■□□□□ 0.68
PTK7-211ENST00000473339 PRKAR2AP13861 404 aaKnown RBP19.27■□□□□ 0.68
PTK7-211ENST00000473339 TFAP4Q01664 338 aa19.27■□□□□ 0.68
PTK7-211ENST00000473339 ZNF287Q9HBT7 754 aa19.27■□□□□ 0.68
PTK7-211ENST00000473339 SYNPO2Q9UMS6 1093 aa19.27■□□□□ 0.68
PTK7-211ENST00000473339 ZMYM6O95789 1325 aa19.26■□□□□ 0.67
PTK7-211ENST00000473339 TRIM6-TRIM34B2RNG4 842 aa19.26■□□□□ 0.67
PTK7-211ENST00000473339 PDE4BQ07343 736 aa19.26■□□□□ 0.67
PTK7-211ENST00000473339 LHX8Q68G74 356 aa19.26■□□□□ 0.67
PTK7-211ENST00000473339 GMCL1P1Q8NEA9 526 aa19.26■□□□□ 0.67
PTK7-211ENST00000473339 RILPL2Q969X0 211 aa19.26■□□□□ 0.67
PTK7-211ENST00000473339 IL25Q9H293 177 aa19.26■□□□□ 0.67
PTK7-211ENST00000473339 CCDC171Q6TFL3 1326 aa19.25■□□□□ 0.67
PTK7-211ENST00000473339 ORC4O43929 436 aa19.25■□□□□ 0.67
PTK7-211ENST00000473339 NMT2O60551 498 aa19.25■□□□□ 0.67
PTK7-211ENST00000473339 TTLL1O95922 423 aa19.25■□□□□ 0.67
PTK7-211ENST00000473339 GSPT1P15170 499 aaKnown RBP19.25■□□□□ 0.67
PTK7-211ENST00000473339 CCND3P30281 292 aaPredicted RBP19.25■□□□□ 0.67
PTK7-211ENST00000473339 CCAR1Q8IX12 1150 aaKnown RBP19.25■□□□□ 0.67
PTK7-211ENST00000473339 TRMT44Q8IYL2 757 aaKnown RBP19.25■□□□□ 0.67
PTK7-211ENST00000473339 LRRC47Q8N1G4 583 aaKnown RBP19.25■□□□□ 0.67
PTK7-211ENST00000473339 HMX1Q9NP08 348 aaPredicted RBP19.25■□□□□ 0.67
PTK7-211ENST00000473339 OGDHLQ9ULD0 1010 aa19.25■□□□□ 0.67
PTK7-211ENST00000473339 STRNO43815 780 aa19.24■□□□□ 0.67
PTK7-211ENST00000473339 TSPY3P0CV98 308 aa19.24■□□□□ 0.67
PTK7-211ENST00000473339 TSPY8P0CW00 308 aa19.24■□□□□ 0.67
PTK7-211ENST00000473339 ZKSCAN1P17029 563 aaPredicted RBP19.24■□□□□ 0.67
PTK7-211ENST00000473339 ADORA2AP29274 412 aa19.24■□□□□ 0.67
PTK7-211ENST00000473339 RIOX2Q8IUF8 465 aa19.24■□□□□ 0.67
PTK7-211ENST00000473339 TRPV1Q8NER1 839 aa19.24■□□□□ 0.67
PTK7-211ENST00000473339 DIS3LQ8TF46 1054 aaKnown RBP19.24■□□□□ 0.67
PTK7-211ENST00000473339 MROH8Q9H579 483 aa19.24■□□□□ 0.67
PTK7-211ENST00000473339 ZNF236Q9UL36 1845 aa19.23■□□□□ 0.67
PTK7-211ENST00000473339 CEP290O15078 2479 aa19.23■□□□□ 0.67
PTK7-211ENST00000473339 FARP2O94887 1054 aaPredicted RBP19.23■□□□□ 0.67
PTK7-211ENST00000473339 TFRCP02786 760 aaKnown RBP19.23■□□□□ 0.67
PTK7-211ENST00000473339 SLC3A2P08195 630 aaKnown RBP19.23■□□□□ 0.67
PTK7-211ENST00000473339 CAPN2P17655 700 aa19.23■□□□□ 0.67
PTK7-211ENST00000473339 WDR78Q5VTH9 848 aa19.23■□□□□ 0.67
PTK7-211ENST00000473339 ABRAQ8N0Z2 381 aa19.23■□□□□ 0.67
PTK7-211ENST00000473339 SLF1Q9BQI6 1058 aa19.23■□□□□ 0.67
PTK7-211ENST00000473339 RIPK3Q9Y572 518 aa19.23■□□□□ 0.67
PTK7-211ENST00000473339 ATP2A1O14983 1001 aa19.22■□□□□ 0.67
PTK7-211ENST00000473339 STAT3P40763 770 aa19.22■□□□□ 0.67
PTK7-211ENST00000473339 RASGRP2Q7LDG7 609 aa19.22■□□□□ 0.67
PTK7-211ENST00000473339 TBC1D10CQ8IV04 446 aa19.22■□□□□ 0.67
PTK7-211ENST00000473339 RAD21O60216 631 aa19.21■□□□□ 0.67
PTK7-211ENST00000473339 SLC25A27O95847 323 aa19.21■□□□□ 0.67
PTK7-211ENST00000473339 CYP2C19P33261 490 aa19.21■□□□□ 0.67
PTK7-211ENST00000473339 PLS1Q14651 629 aa19.21■□□□□ 0.67
PTK7-211ENST00000473339 OLFML2BQ68BL8 750 aa19.21■□□□□ 0.67
PTK7-211ENST00000473339 SLFN13Q68D06 897 aa19.21■□□□□ 0.67
PTK7-211ENST00000473339 SAMD1Q6SPF0 538 aaPredicted RBP19.21■□□□□ 0.67
PTK7-211ENST00000473339 CWC27Q6UX04 472 aaKnown RBP19.21■□□□□ 0.67
PTK7-211ENST00000473339 NCAPG2Q86XI2 1143 aa19.21■□□□□ 0.67
PTK7-211ENST00000473339 PRPF38AQ8NAV1 312 aaKnown RBP19.21■□□□□ 0.67
PTK7-211ENST00000473339 PAWRQ96IZ0 340 aaKnown RBP19.21■□□□□ 0.67
PTK7-211ENST00000473339 IVNS1ABPQ9Y6Y0 642 aa19.21■□□□□ 0.67
PTK7-211ENST00000473339 COL11A1P12107 1806 aaPredicted RBP19.21■□□□□ 0.67
PTK7-211ENST00000473339 TTC22Q5TAA0 569 aa19.2■□□□□ 0.66
PTK7-211ENST00000473339 RCSD1Q6JBY9 416 aa19.2■□□□□ 0.66
PTK7-211ENST00000473339 ANKLE1Q8NAG6 615 aa19.2■□□□□ 0.66
PTK7-211ENST00000473339 GMCL1Q96IK5 515 aa19.2■□□□□ 0.66
PTK7-211ENST00000473339 SLC38A10Q9HBR0 1119 aa19.2■□□□□ 0.66
PTK7-211ENST00000473339 TCP11L1Q9NUJ3 509 aa19.2■□□□□ 0.66
PTK7-211ENST00000473339 H0YGN5 161 aa19.19■□□□□ 0.66
PTK7-211ENST00000473339 COL6A1P12109 1028 aa19.19■□□□□ 0.66
PTK7-211ENST00000473339 CYBAP13498 195 aa19.19■□□□□ 0.66
PTK7-211ENST00000473339 HAND2P61296 217 aa19.19■□□□□ 0.66
PTK7-211ENST00000473339 ZNF792Q3KQV3 632 aa19.19■□□□□ 0.66
PTK7-211ENST00000473339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.19■□□□□ 0.66
PTK7-211ENST00000473339 FEM1BQ9UK73 627 aa19.19■□□□□ 0.66
PTK7-211ENST00000473339 LAMA3Q16787 3333 aa19.19■□□□□ 0.66
PTK7-211ENST00000473339 MYH4Q9Y623 1939 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms