RNA–Protein interactions for RNA: ENST00000473322.1

CCDC66-215, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-215ENST00000473322 CTNND2Q9UQB3 1225 aa6.95□□□□□ -1.3
CCDC66-215ENST00000473322 BMS1Q14692 1282 aaKnown RBP6.94□□□□□ -1.3
CCDC66-215ENST00000473322 LRRFIP1Q32MZ4 808 aaKnown RBP6.94□□□□□ -1.3
CCDC66-215ENST00000473322 SEZ6Q53EL9 994 aa6.94□□□□□ -1.3
CCDC66-215ENST00000473322 VWCEQ96DN2 955 aa6.94□□□□□ -1.3
CCDC66-215ENST00000473322 GINM1Q9NU53 330 aa6.94□□□□□ -1.3
CCDC66-215ENST00000473322 GPATCH2Q9NW75 528 aa6.94□□□□□ -1.3
CCDC66-215ENST00000473322 PRKAG3Q9UGI9 489 aa6.94□□□□□ -1.3
CCDC66-215ENST00000473322 EFR3BQ9Y2G0 817 aa6.94□□□□□ -1.3
CCDC66-215ENST00000473322 RAG1P15918 1043 aa6.93□□□□□ -1.3
CCDC66-215ENST00000473322 GDNFP39905 211 aa6.93□□□□□ -1.3
CCDC66-215ENST00000473322 CCNFP41002 786 aa6.93□□□□□ -1.3
CCDC66-215ENST00000473322 ZNF662Q6ZS27 426 aa6.93□□□□□ -1.3
CCDC66-215ENST00000473322 OR6P1Q8NGX9 317 aa6.93□□□□□ -1.3
CCDC66-215ENST00000473322 NKD1Q969G9 470 aa6.93□□□□□ -1.3
CCDC66-215ENST00000473322 KIF2CQ99661 725 aa6.93□□□□□ -1.3
CCDC66-215ENST00000473322 KRTAP4-12Q9BQ66 201 aa6.93□□□□□ -1.3
CCDC66-215ENST00000473322 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.93□□□□□ -1.3
CCDC66-215ENST00000473322 CNNM2Q9H8M5 875 aa6.93□□□□□ -1.3
CCDC66-215ENST00000473322 CARMIL2Q6F5E8 1435 aa6.93□□□□□ -1.3
CCDC66-215ENST00000473322 MEIS3P2A8K0S8 358 aa6.92□□□□□ -1.3
CCDC66-215ENST00000473322 U2SURPO15042 1029 aaKnown RBP6.92□□□□□ -1.3
CCDC66-215ENST00000473322 ESR1P03372 595 aa6.92□□□□□ -1.3
CCDC66-215ENST00000473322 GBP1P32455 592 aa6.92□□□□□ -1.3
CCDC66-215ENST00000473322 RNF4P78317 190 aa6.92□□□□□ -1.3
CCDC66-215ENST00000473322 CLCQ05315 142 aa6.92□□□□□ -1.3
CCDC66-215ENST00000473322 ARSHQ5FYA8 562 aa6.92□□□□□ -1.3
CCDC66-215ENST00000473322 OVOS1Q6IE37 1185 aa6.92□□□□□ -1.3
CCDC66-215ENST00000473322 TSPYL5Q86VY4 417 aaPredicted RBP6.92□□□□□ -1.3
CCDC66-215ENST00000473322 ALPK1Q96QP1 1244 aa6.92□□□□□ -1.3
CCDC66-215ENST00000473322 GOLGA2P5Q9HBQ8 144 aa6.92□□□□□ -1.3
CCDC66-215ENST00000473322 MSRB2Q9Y3D2 182 aa6.92□□□□□ -1.3
CCDC66-215ENST00000473322 UBOX5O94941 541 aa6.91□□□□□ -1.3
CCDC66-215ENST00000473322 TPP2P29144 1249 aaPredicted RBP6.91□□□□□ -1.3
CCDC66-215ENST00000473322 MCM4P33991 863 aa6.91□□□□□ -1.3
CCDC66-215ENST00000473322 AFMP43652 599 aa6.91□□□□□ -1.3
CCDC66-215ENST00000473322 RASA3Q14644 834 aa6.91□□□□□ -1.3
CCDC66-215ENST00000473322 TCEAL1Q15170 157 aa6.91□□□□□ -1.3
CCDC66-215ENST00000473322 PLEKHG4Q58EX7 1191 aa6.91□□□□□ -1.3
CCDC66-215ENST00000473322 GK5Q6ZS86 529 aa6.91□□□□□ -1.3
CCDC66-215ENST00000473322 ANKS3Q6ZW76 656 aa6.91□□□□□ -1.3
CCDC66-215ENST00000473322 NLRC3Q7RTR2 1065 aa6.91□□□□□ -1.3
CCDC66-215ENST00000473322 ENOX1Q8TC92 643 aaKnown RBP6.91□□□□□ -1.3
CCDC66-215ENST00000473322 TMEM40Q8WWA1 233 aa6.91□□□□□ -1.3
CCDC66-215ENST00000473322 FAM168AQ92567 244 aa6.91□□□□□ -1.3
CCDC66-215ENST00000473322 ATG4CQ96DT6 458 aa6.91□□□□□ -1.3
CCDC66-215ENST00000473322 SHDQ96IW2 340 aa6.91□□□□□ -1.3
CCDC66-215ENST00000473322 SRRTQ9BXP5 876 aaKnown RBP6.91□□□□□ -1.3
CCDC66-215ENST00000473322 TRIM55Q9BYV6 548 aa6.91□□□□□ -1.3
CCDC66-215ENST00000473322 CCDC113Q9H0I3 377 aa6.91□□□□□ -1.3
CCDC66-215ENST00000473322 C19orf73Q9NVV2 129 aa6.91□□□□□ -1.3
CCDC66-215ENST00000473322 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.91□□□□□ -1.3
CCDC66-215ENST00000473322 RBAK-RBAKDNI3L0D1 243 aa6.9□□□□□ -1.3
CCDC66-215ENST00000473322 LRRN2O75325 713 aa6.9□□□□□ -1.3
CCDC66-215ENST00000473322 IMPDH2P12268 514 aa6.9□□□□□ -1.3
CCDC66-215ENST00000473322 CHMP4BP1P59074 171 aa6.9□□□□□ -1.3
CCDC66-215ENST00000473322 LCE3BQ5TA77 95 aa6.9□□□□□ -1.3
CCDC66-215ENST00000473322 OGFOD2Q6N063 350 aa6.9□□□□□ -1.3
CCDC66-215ENST00000473322 ZSWIM9Q86XI8 627 aa6.9□□□□□ -1.3
CCDC66-215ENST00000473322 POU5F2Q8N7G0 328 aa6.9□□□□□ -1.3
CCDC66-215ENST00000473322 ZCRB1Q8TBF4 217 aaKnown RBP6.9□□□□□ -1.3
CCDC66-215ENST00000473322 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.9□□□□□ -1.3
CCDC66-215ENST00000473322 PRKAB1Q9Y478 270 aa6.9□□□□□ -1.3
CCDC66-215ENST00000473322 MRPL42Q9Y6G3 142 aaKnown RBP6.9□□□□□ -1.3
CCDC66-215ENST00000473322 WASH4PA8MWX3 477 aa6.89□□□□□ -1.31
CCDC66-215ENST00000473322 ETFBP38117 255 aa6.89□□□□□ -1.31
CCDC66-215ENST00000473322 CREG2Q8IUH2 290 aa6.89□□□□□ -1.31
CCDC66-215ENST00000473322 RBBP8NLQ8NC74 664 aaPredicted RBP6.89□□□□□ -1.31
CCDC66-215ENST00000473322 SNTG2Q9NY99 539 aa6.89□□□□□ -1.31
CCDC66-215ENST00000473322 DUSP13Q9UII6 198 aa6.89□□□□□ -1.31
CCDC66-215ENST00000473322 ZNRF3Q9ULT6 936 aa6.89□□□□□ -1.31
CCDC66-215ENST00000473322 TNFRSF10CO14798 259 aa6.88□□□□□ -1.31
CCDC66-215ENST00000473322 NME1P15531 152 aaKnown RBP6.88□□□□□ -1.31
CCDC66-215ENST00000473322 GIPRP48546 466 aa6.88□□□□□ -1.31
CCDC66-215ENST00000473322 KCNMB1Q16558 191 aa6.88□□□□□ -1.31
CCDC66-215ENST00000473322 RNF187Q5TA31 235 aaPredicted RBP6.88□□□□□ -1.31
CCDC66-215ENST00000473322 NBPF12Q5TAG4 269 aaPredicted RBP6.88□□□□□ -1.31
CCDC66-215ENST00000473322 INTS3Q68E01 1043 aaKnown RBP6.88□□□□□ -1.31
CCDC66-215ENST00000473322 KRTAP19-1Q8IUB9 90 aa6.88□□□□□ -1.31
CCDC66-215ENST00000473322 RNPC3Q96LT9 517 aaKnown RBP6.88□□□□□ -1.31
CCDC66-215ENST00000473322 DEPDC7Q96QD5 511 aa6.88□□□□□ -1.31
CCDC66-215ENST00000473322 SRPK1Q96SB4 655 aaKnown RBP6.88□□□□□ -1.31
CCDC66-215ENST00000473322 SLAMF8Q9P0V8 285 aa6.88□□□□□ -1.31
CCDC66-215ENST00000473322 PTPROQ16827 1216 aa6.87□□□□□ -1.31
CCDC66-215ENST00000473322 NBPF9Q3BBW0 867 aa6.87□□□□□ -1.31
CCDC66-215ENST00000473322 SYTL5Q8TDW5 730 aaPredicted RBP6.87□□□□□ -1.31
CCDC66-215ENST00000473322 CPLX3Q8WVH0 158 aa6.87□□□□□ -1.31
CCDC66-215ENST00000473322 ZNF669Q96BR6 464 aaPredicted RBP6.87□□□□□ -1.31
CCDC66-215ENST00000473322 ASCC2Q9H1I8 757 aaPredicted RBP6.87□□□□□ -1.31
CCDC66-215ENST00000473322 FAM53CQ9NYF3 392 aa6.87□□□□□ -1.31
CCDC66-215ENST00000473322 TMEM59LQ9UK28 342 aa6.87□□□□□ -1.31
CCDC66-215ENST00000473322 R3HCC1Q9Y3T6 440 aaKnown RBP6.87□□□□□ -1.31
CCDC66-215ENST00000473322 DNAJC25-GNG10A0A024R161 153 aa6.86□□□□□ -1.31
CCDC66-215ENST00000473322 SHISA3A0PJX4 238 aa6.86□□□□□ -1.31
CCDC66-215ENST00000473322 CLEC3AO75596 197 aa6.86□□□□□ -1.31
CCDC66-215ENST00000473322 POLR2BP30876 1174 aaKnown RBP6.86□□□□□ -1.31
CCDC66-215ENST00000473322 EGR3Q06889 387 aa6.86□□□□□ -1.31
CCDC66-215ENST00000473322 NMIQ13287 307 aaPredicted RBP6.86□□□□□ -1.31
CCDC66-215ENST00000473322 RASGRF1Q13972 1273 aa6.86□□□□□ -1.31
CCDC66-215ENST00000473322 CLEC16AQ2KHT3 1053 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms