RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 USP17L7P0C7H9 530 aa7.16□□□□□ -1.26
RTF1-203ENST00000473214 NUCB1Q02818 461 aa7.16□□□□□ -1.26
RTF1-203ENST00000473214 ITKQ08881 620 aa7.16□□□□□ -1.26
RTF1-203ENST00000473214 JAKMIP3Q5VZ66 844 aa7.16□□□□□ -1.26
RTF1-203ENST00000473214 TXNRD3Q86VQ6 643 aa7.16□□□□□ -1.26
RTF1-203ENST00000473214 RASSF3Q86WH2 238 aa7.16□□□□□ -1.26
RTF1-203ENST00000473214 RELL1Q8IUW5 271 aa7.16□□□□□ -1.26
RTF1-203ENST00000473214 OTUD6BQ8N6M0 293 aa7.16□□□□□ -1.26
RTF1-203ENST00000473214 PJA1Q8NG27 643 aa7.16□□□□□ -1.26
RTF1-203ENST00000473214 JPH3Q8WXH2 748 aaPredicted RBP7.16□□□□□ -1.26
RTF1-203ENST00000473214 EAF1Q96JC9 268 aaPredicted RBP7.16□□□□□ -1.26
RTF1-203ENST00000473214 SUSD3Q96L08 255 aa7.16□□□□□ -1.26
RTF1-203ENST00000473214 SARGQ9BW04 601 aa7.16□□□□□ -1.26
RTF1-203ENST00000473214 SEZ6LQ9BYH1 1024 aa7.16□□□□□ -1.26
RTF1-203ENST00000473214 PHACTR1Q9C0D0 580 aa7.16□□□□□ -1.26
RTF1-203ENST00000473214 CSRNP2Q9H175 543 aa7.16□□□□□ -1.26
RTF1-203ENST00000473214 CNNM2Q9H8M5 875 aa7.16□□□□□ -1.26
RTF1-203ENST00000473214 PLCB1Q9NQ66 1216 aa7.16□□□□□ -1.26
RTF1-203ENST00000473214 ABCF2Q9UG63 623 aa7.16□□□□□ -1.26
RTF1-203ENST00000473214 HCN4Q9Y3Q4 1203 aa7.16□□□□□ -1.26
RTF1-203ENST00000473214 CARMIL1Q5VZK9 1371 aa7.16□□□□□ -1.26
RTF1-203ENST00000473214 RHOBTB3O94955 611 aa7.15□□□□□ -1.26
RTF1-203ENST00000473214 TNFAIP3P21580 790 aa7.15□□□□□ -1.26
RTF1-203ENST00000473214 DDIT3P35638 169 aa7.15□□□□□ -1.26
RTF1-203ENST00000473214 DNM1Q05193 864 aaKnown RBP7.15□□□□□ -1.26
RTF1-203ENST00000473214 CHAF1AQ13111 956 aaPredicted RBP7.15□□□□□ -1.26
RTF1-203ENST00000473214 DDX10Q13206 875 aaKnown RBP7.15□□□□□ -1.26
RTF1-203ENST00000473214 COL9A2Q14055 689 aaPredicted RBP7.15□□□□□ -1.26
RTF1-203ENST00000473214 SEPT6Q14141 434 aa7.15□□□□□ -1.26
RTF1-203ENST00000473214 AKAP4Q5JQC9 854 aa7.15□□□□□ -1.26
RTF1-203ENST00000473214 PERM1Q5SV97 790 aa7.15□□□□□ -1.26
RTF1-203ENST00000473214 ERICH6BQ5W0A0 696 aa7.15□□□□□ -1.26
RTF1-203ENST00000473214 CFAP161Q6P656 301 aa7.15□□□□□ -1.26
RTF1-203ENST00000473214 C1orf228Q6PIY5 440 aa7.15□□□□□ -1.26
RTF1-203ENST00000473214 RNF180Q86T96 592 aa7.15□□□□□ -1.26
RTF1-203ENST00000473214 RPAINQ86UA6 219 aa7.15□□□□□ -1.26
RTF1-203ENST00000473214 NDUFAF2Q8N183 169 aa7.15□□□□□ -1.26
RTF1-203ENST00000473214 ABTB2Q8N961 1025 aa7.15□□□□□ -1.26
RTF1-203ENST00000473214 PI4K2BQ8TCG2 481 aa7.15□□□□□ -1.26
RTF1-203ENST00000473214 GOLGA1Q92805 767 aa7.15□□□□□ -1.26
RTF1-203ENST00000473214 BHMTQ93088 406 aa7.15□□□□□ -1.26
RTF1-203ENST00000473214 PGBD4Q96DM1 585 aa7.15□□□□□ -1.26
RTF1-203ENST00000473214 YIPF4Q9BSR8 244 aa7.15□□□□□ -1.26
RTF1-203ENST00000473214 OSBPL7Q9BZF2 842 aa7.15□□□□□ -1.26
RTF1-203ENST00000473214 ACTR10Q9NZ32 417 aa7.15□□□□□ -1.26
RTF1-203ENST00000473214 ACAD8Q9UKU7 415 aa7.15□□□□□ -1.26
RTF1-203ENST00000473214 SYNPO2Q9UMS6 1093 aa7.15□□□□□ -1.26
RTF1-203ENST00000473214 MINDY4BA8MYZ0 360 aa7.14□□□□□ -1.27
RTF1-203ENST00000473214 F6X3S4 739 aa7.14□□□□□ -1.27
RTF1-203ENST00000473214 GIPC1O14908 333 aa7.14□□□□□ -1.27
RTF1-203ENST00000473214 SNX2O60749 519 aa7.14□□□□□ -1.27
RTF1-203ENST00000473214 HMMRO75330 724 aa7.14□□□□□ -1.27
RTF1-203ENST00000473214 CLK1P49759 484 aaKnown RBP7.14□□□□□ -1.27
RTF1-203ENST00000473214 ZBED6P86452 979 aa7.14□□□□□ -1.27
RTF1-203ENST00000473214 NRG1Q02297 640 aaPredicted RBP7.14□□□□□ -1.27
RTF1-203ENST00000473214 STK3Q13188 491 aa7.14□□□□□ -1.27
RTF1-203ENST00000473214 TCIRG1Q13488 830 aa7.14□□□□□ -1.27
RTF1-203ENST00000473214 MTMR1Q13613 665 aa7.14□□□□□ -1.27
RTF1-203ENST00000473214 SEPT2Q15019 361 aa7.14□□□□□ -1.27
RTF1-203ENST00000473214 MED1Q15648 1581 aaPredicted RBP7.14□□□□□ -1.27
RTF1-203ENST00000473214 TSHZ3Q63HK5 1081 aa7.14□□□□□ -1.27
RTF1-203ENST00000473214 TTC37Q6PGP7 1564 aa7.14□□□□□ -1.27
RTF1-203ENST00000473214 ABCA9Q8IUA7 1624 aa7.14□□□□□ -1.27
RTF1-203ENST00000473214 JMYQ8N9B5 988 aa7.14□□□□□ -1.27
RTF1-203ENST00000473214 RIN3Q8TB24 985 aa7.14□□□□□ -1.27
RTF1-203ENST00000473214 CCDC47Q96A33 483 aaKnown RBP7.14□□□□□ -1.27
RTF1-203ENST00000473214 CHMP4CQ96CF2 233 aa7.14□□□□□ -1.27
RTF1-203ENST00000473214 PRDM11Q9NQV5 511 aa7.14□□□□□ -1.27
RTF1-203ENST00000473214 FAM8A1Q9UBU6 413 aa7.14□□□□□ -1.27
RTF1-203ENST00000473214 YEATS2Q9ULM3 1422 aa7.14□□□□□ -1.27
RTF1-203ENST00000473214 SLC6A14Q9UN76 642 aa7.14□□□□□ -1.27
RTF1-203ENST00000473214 FER1L4A9Z1Z3 1794 aa7.13□□□□□ -1.27
RTF1-203ENST00000473214 KIF27Q86VH2 1401 aa7.13□□□□□ -1.27
RTF1-203ENST00000473214 KLRG2A4D1S0 409 aaPredicted RBP7.13□□□□□ -1.27
RTF1-203ENST00000473214 CPEP16870 476 aa7.13□□□□□ -1.27
RTF1-203ENST00000473214 EIF4A3P38919 411 aaKnown RBP7.13□□□□□ -1.27
RTF1-203ENST00000473214 CEBPAP49715 358 aaPredicted RBP7.13□□□□□ -1.27
RTF1-203ENST00000473214 RENBPP51606 427 aa7.13□□□□□ -1.27
RTF1-203ENST00000473214 SSRP1Q08945 709 aaKnown RBP7.13□□□□□ -1.27
RTF1-203ENST00000473214 WASHC5Q12768 1159 aa7.13□□□□□ -1.27
RTF1-203ENST00000473214 COBLL1Q53SF7 1204 aa7.13□□□□□ -1.27
RTF1-203ENST00000473214 COX20Q5RI15 118 aa7.13□□□□□ -1.27
RTF1-203ENST00000473214 PCNX4Q63HM2 1172 aa7.13□□□□□ -1.27
RTF1-203ENST00000473214 SHISA2Q6UWI4 295 aa7.13□□□□□ -1.27
RTF1-203ENST00000473214 PI16Q6UXB8 463 aa7.13□□□□□ -1.27
RTF1-203ENST00000473214 CCDC81Q6ZN84 652 aa7.13□□□□□ -1.27
RTF1-203ENST00000473214 AFAP1L2Q8N4X5 818 aa7.13□□□□□ -1.27
RTF1-203ENST00000473214 ATXN2LQ8WWM7 1075 aaKnown RBP7.13□□□□□ -1.27
RTF1-203ENST00000473214 ATRIPQ8WXE1 791 aa7.13□□□□□ -1.27
RTF1-203ENST00000473214 RPGRQ92834 1020 aaKnown RBP7.13□□□□□ -1.27
RTF1-203ENST00000473214 TP53INP1Q96A56 240 aa7.13□□□□□ -1.27
RTF1-203ENST00000473214 SHDQ96IW2 340 aa7.13□□□□□ -1.27
RTF1-203ENST00000473214 CDK5RAP3Q96JB5 506 aa7.13□□□□□ -1.27
RTF1-203ENST00000473214 CAMKK2Q96RR4 588 aa7.13□□□□□ -1.27
RTF1-203ENST00000473214 SSBP4Q9BWG4 385 aaPredicted RBP7.13□□□□□ -1.27
RTF1-203ENST00000473214 CCDC8Q9H0W5 538 aaPredicted RBP7.13□□□□□ -1.27
RTF1-203ENST00000473214 EFCC1Q9HA90 598 aa7.13□□□□□ -1.27
RTF1-203ENST00000473214 FBRSQ9HAH7 460 aa7.13□□□□□ -1.27
RTF1-203ENST00000473214 JPH1Q9HDC5 661 aaPredicted RBP7.13□□□□□ -1.27
RTF1-203ENST00000473214 DGKBQ9Y6T7 804 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms