RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 SHCBP1Q8NEM2 672 aa23.05■■□□□ 1.28
COMMD1-208ENST00000472729 TRIB2Q92519 343 aa23.05■■□□□ 1.28
COMMD1-208ENST00000472729 HTATIP2Q9BUP3 242 aa23.05■■□□□ 1.28
COMMD1-208ENST00000472729 SYNPO2Q9UMS6 1093 aa23.05■■□□□ 1.28
COMMD1-208ENST00000472729 SLC25A27O95847 323 aa23.04■■□□□ 1.28
COMMD1-208ENST00000472729 PRKAR2AP13861 404 aaKnown RBP23.04■■□□□ 1.28
COMMD1-208ENST00000472729 ERCC3P19447 782 aa23.04■■□□□ 1.28
COMMD1-208ENST00000472729 ALX1Q15699 326 aa23.04■■□□□ 1.28
COMMD1-208ENST00000472729 DPF3Q92784 378 aa23.04■■□□□ 1.28
COMMD1-208ENST00000472729 SLF1Q9BQI6 1058 aa23.04■■□□□ 1.28
COMMD1-208ENST00000472729 PPP1R9AQ9ULJ8 1098 aa23.04■■□□□ 1.28
COMMD1-208ENST00000472729 STX8Q9UNK0 236 aa23.04■■□□□ 1.28
COMMD1-208ENST00000472729 CCDC171Q6TFL3 1326 aa23.04■■□□□ 1.28
COMMD1-208ENST00000472729 FARP2O94887 1054 aaPredicted RBP23.03■■□□□ 1.28
COMMD1-208ENST00000472729 NDUFB10O96000 172 aa23.03■■□□□ 1.28
COMMD1-208ENST00000472729 CWC27Q6UX04 472 aaKnown RBP23.03■■□□□ 1.28
COMMD1-208ENST00000472729 PAK6Q9NQU5 681 aaPredicted RBP23.03■■□□□ 1.28
COMMD1-208ENST00000472729 CENPFP49454 3210 aa23.02■■□□□ 1.28
COMMD1-208ENST00000472729 ZBED4O75132 1171 aa23.02■■□□□ 1.28
COMMD1-208ENST00000472729 FGAP02671 866 aa23.02■■□□□ 1.28
COMMD1-208ENST00000472729 HSPD1P10809 573 aaKnown RBP23.02■■□□□ 1.28
COMMD1-208ENST00000472729 FCER1AP12319 257 aa23.02■■□□□ 1.28
COMMD1-208ENST00000472729 COPB2P35606 906 aa23.02■■□□□ 1.28
COMMD1-208ENST00000472729 IKQ13123 557 aaPredicted RBP23.02■■□□□ 1.28
COMMD1-208ENST00000472729 GRB14Q14449 540 aa23.02■■□□□ 1.28
COMMD1-208ENST00000472729 RRP12Q5JTH9 1297 aaKnown RBP23.02■■□□□ 1.28
COMMD1-208ENST00000472729 LRRC47Q8N1G4 583 aaKnown RBP23.02■■□□□ 1.28
COMMD1-208ENST00000472729 PRPF38AQ8NAV1 312 aaKnown RBP23.02■■□□□ 1.28
COMMD1-208ENST00000472729 USP6NLQ92738 828 aa23.02■■□□□ 1.28
COMMD1-208ENST00000472729 MKL1Q969V6 931 aa23.02■■□□□ 1.28
COMMD1-208ENST00000472729 NUP88Q99567 741 aaPredicted RBP23.02■■□□□ 1.28
COMMD1-208ENST00000472729 FBXO28Q9NVF7 368 aa23.02■■□□□ 1.28
COMMD1-208ENST00000472729 ANAPC4Q9UJX5 808 aa23.02■■□□□ 1.28
COMMD1-208ENST00000472729 MYH7P12883 1935 aa23.02■■□□□ 1.28
COMMD1-208ENST00000472729 IGKV6D-41A0A0C4DH26 115 aa23.01■■□□□ 1.27
COMMD1-208ENST00000472729 VWA5AO00534 786 aa23.01■■□□□ 1.27
COMMD1-208ENST00000472729 STAT3P40763 770 aa23.01■■□□□ 1.27
COMMD1-208ENST00000472729 TRIM32Q13049 653 aa23.01■■□□□ 1.27
COMMD1-208ENST00000472729 SLFN13Q68D06 897 aa23.01■■□□□ 1.27
COMMD1-208ENST00000472729 SHISA4Q96DD7 197 aa23.01■■□□□ 1.27
COMMD1-208ENST00000472729 BAZ2AQ9UIF9 1905 aaKnown RBP23■■□□□ 1.27
COMMD1-208ENST00000472729 ADORA2AP29274 412 aa23■■□□□ 1.27
COMMD1-208ENST00000472729 SLC4A3P48751 1232 aa23■■□□□ 1.27
COMMD1-208ENST00000472729 KCTD2Q14681 263 aa23■■□□□ 1.27
COMMD1-208ENST00000472729 TMEM132BQ14DG7 1078 aa23■■□□□ 1.27
COMMD1-208ENST00000472729 CCL14Q16627 93 aa23■■□□□ 1.27
COMMD1-208ENST00000472729 GMCL1P1Q8NEA9 526 aa23■■□□□ 1.27
COMMD1-208ENST00000472729 KIFC2Q96AC6 838 aa23■■□□□ 1.27
COMMD1-208ENST00000472729 RNF41Q9H4P4 317 aaPredicted RBP23■■□□□ 1.27
COMMD1-208ENST00000472729 FEM1BQ9UK73 627 aa23■■□□□ 1.27
COMMD1-208ENST00000472729 KIAA0100Q14667 2235 aaKnown RBP23■■□□□ 1.27
COMMD1-208ENST00000472729 ZNF213O14771 459 aa22.99■■□□□ 1.27
COMMD1-208ENST00000472729 BMP3P12645 472 aa22.99■■□□□ 1.27
COMMD1-208ENST00000472729 CNGA1P29973 690 aa22.99■■□□□ 1.27
COMMD1-208ENST00000472729 SLC1A4P43007 532 aa22.99■■□□□ 1.27
COMMD1-208ENST00000472729 CACNB2Q08289 660 aaPredicted RBP22.99■■□□□ 1.27
COMMD1-208ENST00000472729 MFSD6Q6ZSS7 791 aa22.99■■□□□ 1.27
COMMD1-208ENST00000472729 ZNF589Q86UQ0 364 aaPredicted RBP22.99■■□□□ 1.27
COMMD1-208ENST00000472729 ABRAQ8N0Z2 381 aa22.99■■□□□ 1.27
COMMD1-208ENST00000472729 FOXP2O15409 715 aa22.98■■□□□ 1.27
COMMD1-208ENST00000472729 ORC4O43929 436 aa22.98■■□□□ 1.27
COMMD1-208ENST00000472729 HOXC6P09630 235 aa22.98■■□□□ 1.27
COMMD1-208ENST00000472729 PCP11498 1178 aaKnown RBP22.98■■□□□ 1.27
COMMD1-208ENST00000472729 CHURC1Q8WUH1 139 aa22.98■■□□□ 1.27
COMMD1-208ENST00000472729 MMP19Q99542 508 aa22.98■■□□□ 1.27
COMMD1-208ENST00000472729 TEX13BQ9BXU2 312 aa22.98■■□□□ 1.27
COMMD1-208ENST00000472729 ADAMTS5Q9UNA0 930 aa22.98■■□□□ 1.27
COMMD1-208ENST00000472729 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.98■■□□□ 1.27
COMMD1-208ENST00000472729 PLIN4Q96Q06 1357 aa22.98■■□□□ 1.27
COMMD1-208ENST00000472729 HAND2P61296 217 aa22.97■■□□□ 1.27
COMMD1-208ENST00000472729 MAP3K21Q5TCX8 1036 aa22.97■■□□□ 1.27
COMMD1-208ENST00000472729 NECAB2Q7Z6G3 386 aa22.97■■□□□ 1.27
COMMD1-208ENST00000472729 RIOX2Q8IUF8 465 aa22.97■■□□□ 1.27
COMMD1-208ENST00000472729 ANKLE1Q8NAG6 615 aa22.97■■□□□ 1.27
COMMD1-208ENST00000472729 CRISPLD2Q9H0B8 497 aa22.97■■□□□ 1.27
COMMD1-208ENST00000472729 INCENPQ9NQS7 918 aa22.97■■□□□ 1.27
COMMD1-208ENST00000472729 CTNNA3Q9UI47 895 aa22.97■■□□□ 1.27
COMMD1-208ENST00000472729 ZMYM6O95789 1325 aa22.97■■□□□ 1.27
COMMD1-208ENST00000472729 STAT2P52630 851 aa22.96■■□□□ 1.27
COMMD1-208ENST00000472729 SNRNP48Q6IEG0 339 aaKnown RBP22.96■■□□□ 1.27
COMMD1-208ENST00000472729 CPXCR1Q8N123 301 aa22.96■■□□□ 1.27
COMMD1-208ENST00000472729 MTMR7Q9Y216 660 aa22.96■■□□□ 1.27
COMMD1-208ENST00000472729 NR2E3Q9Y5X4 410 aa22.96■■□□□ 1.27
COMMD1-208ENST00000472729 TMEM232C9JQI7 657 aa22.95■■□□□ 1.26
COMMD1-208ENST00000472729 MGAMO43451 1857 aa22.95■■□□□ 1.26
COMMD1-208ENST00000472729 FDX1P10109 184 aa22.95■■□□□ 1.26
COMMD1-208ENST00000472729 MCCP23508 829 aa22.95■■□□□ 1.26
COMMD1-208ENST00000472729 AKNAD1Q5T1N1 836 aa22.95■■□□□ 1.26
COMMD1-208ENST00000472729 TTC22Q5TAA0 569 aa22.95■■□□□ 1.26
COMMD1-208ENST00000472729 FAM160B2Q86V87 743 aa22.95■■□□□ 1.26
COMMD1-208ENST00000472729 NPLOC4Q8TAT6 608 aa22.95■■□□□ 1.26
COMMD1-208ENST00000472729 RUFY2Q8WXA3 655 aa22.95■■□□□ 1.26
COMMD1-208ENST00000472729 CHMP4CQ96CF2 233 aa22.95■■□□□ 1.26
COMMD1-208ENST00000472729 DDX11Q96FC9 970 aa22.95■■□□□ 1.26
COMMD1-208ENST00000472729 MSCO60682 206 aa22.94■■□□□ 1.26
COMMD1-208ENST00000472729 CYP2C19P33261 490 aa22.94■■□□□ 1.26
COMMD1-208ENST00000472729 IMMTQ16891 758 aaKnown RBP22.94■■□□□ 1.26
COMMD1-208ENST00000472729 OLFML2BQ68BL8 750 aa22.94■■□□□ 1.26
COMMD1-208ENST00000472729 ESR2Q92731 530 aa22.94■■□□□ 1.26
COMMD1-208ENST00000472729 GMCL1Q96IK5 515 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms