RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 ANKS1AQ92625 1134 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 CLIC6Q96NY7 704 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 SDF4Q9BRK5 362 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 RTFDC1Q9BY42 306 aaPredicted RBP7.38□□□□□ -1.23
SPEN-204ENST00000471538 PODXL2Q9NZ53 605 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.38□□□□□ -1.23
SPEN-204ENST00000471538 JAG2Q9Y219 1238 aa7.38□□□□□ -1.23
SPEN-204ENST00000471538 SNED1Q8TER0 1413 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 GOLGA6L19H0YKK7 550 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 POLRMTO00411 1230 aaKnown RBP7.37□□□□□ -1.23
SPEN-204ENST00000471538 SERPINB2P05120 415 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 LDHBP07195 334 aaKnown RBP7.37□□□□□ -1.23
SPEN-204ENST00000471538 TPM2P07951 284 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 SLC3A2P08195 630 aaKnown RBP7.37□□□□□ -1.23
SPEN-204ENST00000471538 USP17L8P0C7I0 530 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 PTGS1P23219 599 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 ATP2B4P23634 1241 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 PTPN5P54829 565 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 FOXK1P85037 733 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 MDM2Q00987 491 aaPredicted RBP7.37□□□□□ -1.23
SPEN-204ENST00000471538 GRIN1Q05586 938 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 GNL2Q13823 731 aaKnown RBP7.37□□□□□ -1.23
SPEN-204ENST00000471538 CCDC144BQ3MJ40 725 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 EARS2Q5JPH6 523 aaKnown RBP7.37□□□□□ -1.23
SPEN-204ENST00000471538 KRBA2Q6ZNG9 492 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 ZNF804AQ7Z570 1209 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 METTL16Q86W50 562 aaKnown RBP7.37□□□□□ -1.23
SPEN-204ENST00000471538 TNS4Q8IZW8 715 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 C17orf53Q8N3J3 647 aaPredicted RBP7.37□□□□□ -1.23
SPEN-204ENST00000471538 CCDC82Q8N4S0 544 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 SRBD1Q8N5C6 995 aaKnown RBP7.37□□□□□ -1.23
SPEN-204ENST00000471538 AOPEPQ8N6M6 819 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 SH3RF3Q8TEJ3 882 aaPredicted RBP7.37□□□□□ -1.23
SPEN-204ENST00000471538 GPR101Q96P66 508 aaPredicted RBP7.37□□□□□ -1.23
SPEN-204ENST00000471538 TRIM5Q9C035 493 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 HSD3B7Q9H2F3 369 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 CD209Q9NNX6 404 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 VPS54Q9P1Q0 977 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 ANKIB1Q9P2G1 1089 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 NRBP1Q9UHY1 535 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 PCDHB6Q9Y5E3 794 aa7.37□□□□□ -1.23
SPEN-204ENST00000471538 NMT2O60551 498 aa7.36□□□□□ -1.23
SPEN-204ENST00000471538 KRT2P35908 639 aa7.36□□□□□ -1.23
SPEN-204ENST00000471538 GSTO1P78417 241 aa7.36□□□□□ -1.23
SPEN-204ENST00000471538 ST5P78524 1137 aa7.36□□□□□ -1.23
SPEN-204ENST00000471538 PDE4BQ07343 736 aa7.36□□□□□ -1.23
SPEN-204ENST00000471538 LONRF3Q496Y0 759 aa7.36□□□□□ -1.23
SPEN-204ENST00000471538 FAM47AQ5JRC9 791 aa7.36□□□□□ -1.23
SPEN-204ENST00000471538 PPP4R3BQ5MIZ7 849 aa7.36□□□□□ -1.23
SPEN-204ENST00000471538 CCDC186Q7Z3E2 898 aa7.36□□□□□ -1.23
SPEN-204ENST00000471538 DGKHQ86XP1 1220 aa7.36□□□□□ -1.23
SPEN-204ENST00000471538 FOXP4Q8IVH2 680 aaPredicted RBP7.36□□□□□ -1.23
SPEN-204ENST00000471538 RBM46Q8TBY0 533 aaKnown RBP7.36□□□□□ -1.23
SPEN-204ENST00000471538 RPGRQ92834 1020 aaKnown RBP7.36□□□□□ -1.23
SPEN-204ENST00000471538 RBM17Q96I25 401 aaKnown RBP7.36□□□□□ -1.23
SPEN-204ENST00000471538 CRAMP1Q96RY5 1269 aa7.36□□□□□ -1.23
SPEN-204ENST00000471538 NAT10Q9H0A0 1025 aaKnown RBP7.36□□□□□ -1.23
SPEN-204ENST00000471538 IL17RBQ9NRM6 502 aa7.36□□□□□ -1.23
SPEN-204ENST00000471538 TCP11L1Q9NUJ3 509 aa7.36□□□□□ -1.23
SPEN-204ENST00000471538 MCM9Q9NXL9 1143 aa7.36□□□□□ -1.23
SPEN-204ENST00000471538 CLIP2Q9UDT6 1046 aa7.36□□□□□ -1.23
SPEN-204ENST00000471538 KCNH3Q9ULD8 1083 aa7.36□□□□□ -1.23
SPEN-204ENST00000471538 VPS9D1Q9Y2B5 631 aa7.36□□□□□ -1.23
SPEN-204ENST00000471538 SRPRBQ9Y5M8 271 aaKnown RBP7.36□□□□□ -1.23
SPEN-204ENST00000471538 GAKO14976 1311 aa7.36□□□□□ -1.23
SPEN-204ENST00000471538 COL11A2P13942 1736 aaPredicted RBP7.36□□□□□ -1.23
SPEN-204ENST00000471538 C10orf71Q711Q0 1435 aa7.36□□□□□ -1.23
SPEN-204ENST00000471538 GPR75-ASB3A0A0A6YYF3 556 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 BECN2A8MW95 431 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 WNT7AO00755 349 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 IKBKBO14920 756 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 NPHP1O15259 732 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 BBOX1O75936 387 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 UFL1O94874 794 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 XBP1P17861 261 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 NOVP48745 357 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 SARSP49591 514 aaKnown RBP7.35□□□□□ -1.23
SPEN-204ENST00000471538 LRMPQ12912 555 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 GRM4Q14833 912 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 DIXDC1Q155Q3 683 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 PFKFB3Q16875 520 aaPredicted RBP7.35□□□□□ -1.23
SPEN-204ENST00000471538 SLC35G1Q2M3R5 365 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 NT5DC1Q5TFE4 455 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 CERS3Q8IU89 383 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 TBC1D16Q8TBP0 767 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 CACTINQ8WUQ7 758 aaKnown RBP7.35□□□□□ -1.23
SPEN-204ENST00000471538 POLLQ9UGP5 575 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 GGA1Q9UJY5 639 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 CEP131Q9UPN4 1083 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 R3HCC1Q9Y3T6 440 aaKnown RBP7.35□□□□□ -1.23
SPEN-204ENST00000471538 V9GY48 417 aaPredicted RBP7.35□□□□□ -1.23
SPEN-204ENST00000471538 FAM205AQ6ZU69 1335 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 ARFGEF1Q9Y6D6 1849 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 SBF1O95248 1867 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 hCG_1642624A0A1W2PR95 340 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 TSPY2A6NKD2 308 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 BHMG1C9JSJ3 638 aaPredicted RBP7.35□□□□□ -1.23
SPEN-204ENST00000471538 BIN1O00499 593 aa7.35□□□□□ -1.23
SPEN-204ENST00000471538 ACTN4O43707 911 aaKnown RBP7.35□□□□□ -1.23
SPEN-204ENST00000471538 BAG3O95817 575 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms