RNA–Protein interactions for RNA: ENST00000471259.1

MRPL40-203, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-203ENST00000471259 VCPKMTQ9H867 229 aa13.67□□□□□ -0.22
MRPL40-203ENST00000471259 SPC25Q9HBM1 224 aa13.67□□□□□ -0.22
MRPL40-203ENST00000471259 STARD7Q9NQZ5 370 aa13.67□□□□□ -0.22
MRPL40-203ENST00000471259 TMX2Q9Y320 296 aa13.67□□□□□ -0.22
MRPL40-203ENST00000471259 ROBO3Q96MS0 1386 aa13.67□□□□□ -0.22
MRPL40-203ENST00000471259 MYO5AQ9Y4I1 1855 aaKnown RBP13.67□□□□□ -0.22
MRPL40-203ENST00000471259 TNFRSF10AO00220 468 aa13.66□□□□□ -0.22
MRPL40-203ENST00000471259 PQBP1O60828 265 aaKnown RBP13.66□□□□□ -0.22
MRPL40-203ENST00000471259 BCAR3O75815 825 aa13.66□□□□□ -0.22
MRPL40-203ENST00000471259 DNAJB2P25686 324 aa13.66□□□□□ -0.22
MRPL40-203ENST00000471259 ICA1Q05084 483 aa13.66□□□□□ -0.22
MRPL40-203ENST00000471259 PPIGQ13427 754 aaKnown RBP eCLIP13.66□□□□□ -0.22
MRPL40-203ENST00000471259 SLC9C2Q5TAH2 1124 aa13.66□□□□□ -0.22
MRPL40-203ENST00000471259 ANKRD33Q7Z3H0 272 aa13.66□□□□□ -0.22
MRPL40-203ENST00000471259 SH3RF1Q7Z6J0 888 aa13.66□□□□□ -0.22
MRPL40-203ENST00000471259 SLC44A5Q8NCS7 719 aa13.66□□□□□ -0.22
MRPL40-203ENST00000471259 IL27Q8NEV9 243 aa13.66□□□□□ -0.22
MRPL40-203ENST00000471259 EAF2Q96CJ1 260 aaPredicted RBP13.66□□□□□ -0.22
MRPL40-203ENST00000471259 RIOK1Q9BRS2 568 aaKnown RBP13.66□□□□□ -0.22
MRPL40-203ENST00000471259 MTIF3Q9H2K0 278 aaKnown RBP13.66□□□□□ -0.22
MRPL40-203ENST00000471259 GOPCQ9HD26 462 aa13.66□□□□□ -0.22
MRPL40-203ENST00000471259 DNAH12Q6ZR08 3092 aa13.66□□□□□ -0.22
MRPL40-203ENST00000471259 A0A1W2PQ45 241 aaPredicted RBP13.65□□□□□ -0.22
MRPL40-203ENST00000471259 A0A1W2PQY0 241 aa13.65□□□□□ -0.22
MRPL40-203ENST00000471259 A0A1W2PRG0 241 aa13.65□□□□□ -0.22
MRPL40-203ENST00000471259 PRAMEF19Q5SWL8 479 aa13.65□□□□□ -0.22
MRPL40-203ENST00000471259 AACSQ86V21 672 aa13.65□□□□□ -0.22
MRPL40-203ENST00000471259 RIOX2Q8IUF8 465 aa13.65□□□□□ -0.22
MRPL40-203ENST00000471259 TMEM57Q8N5G2 664 aa13.65□□□□□ -0.22
MRPL40-203ENST00000471259 PCSK9Q8NBP7 692 aaKnown RBP13.65□□□□□ -0.22
MRPL40-203ENST00000471259 ATXN2LQ8WWM7 1075 aaKnown RBP13.65□□□□□ -0.22
MRPL40-203ENST00000471259 ATG4CQ96DT6 458 aa13.65□□□□□ -0.22
MRPL40-203ENST00000471259 GLT1D1Q96MS3 346 aa13.65□□□□□ -0.22
MRPL40-203ENST00000471259 ZNF576Q9H609 170 aa13.65□□□□□ -0.22
MRPL40-203ENST00000471259 ATP8A2Q9NTI2 1148 aa13.65□□□□□ -0.22
MRPL40-203ENST00000471259 FAM184BQ9ULE4 1060 aa13.65□□□□□ -0.22
MRPL40-203ENST00000471259 NAV1Q8NEY1 1877 aa13.64□□□□□ -0.23
MRPL40-203ENST00000471259 TLR3O15455 904 aaKnown RBP13.64□□□□□ -0.23
MRPL40-203ENST00000471259 STAT3P40763 770 aa13.64□□□□□ -0.23
MRPL40-203ENST00000471259 TMEM199Q8N511 208 aa13.64□□□□□ -0.23
MRPL40-203ENST00000471259 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.64□□□□□ -0.23
MRPL40-203ENST00000471259 TIFAQ96CG3 184 aa13.64□□□□□ -0.23
MRPL40-203ENST00000471259 TSPYL2Q9H2G4 693 aaPredicted RBP13.64□□□□□ -0.23
MRPL40-203ENST00000471259 KANSL2Q9H9L4 492 aa13.64□□□□□ -0.23
MRPL40-203ENST00000471259 DCP1AQ9NPI6 582 aaPredicted RBP13.64□□□□□ -0.23
MRPL40-203ENST00000471259 TLR7Q9NYK1 1049 aaKnown RBP13.64□□□□□ -0.23
MRPL40-203ENST00000471259 CTDP1Q9Y5B0 961 aaPredicted RBP13.64□□□□□ -0.23
MRPL40-203ENST00000471259 A0A0G2JMZ2 1700 aa13.64□□□□□ -0.23
MRPL40-203ENST00000471259 ELP1O95163 1332 aa13.64□□□□□ -0.23
MRPL40-203ENST00000471259 ZNFX1Q9P2E3 1918 aaKnown RBP13.63□□□□□ -0.23
MRPL40-203ENST00000471259 PGK1P00558 417 aa13.63□□□□□ -0.23
MRPL40-203ENST00000471259 TIMP1P01033 207 aa13.63□□□□□ -0.23
MRPL40-203ENST00000471259 TMEM132BQ14DG7 1078 aa13.63□□□□□ -0.23
MRPL40-203ENST00000471259 CCDC129Q6ZRS4 1044 aa13.63□□□□□ -0.23
MRPL40-203ENST00000471259 ITPRIPQ8IWB1 547 aa13.63□□□□□ -0.23
MRPL40-203ENST00000471259 SPICE1Q8N0Z3 855 aa13.63□□□□□ -0.23
MRPL40-203ENST00000471259 CLASRPQ8N2M8 674 aaKnown RBP13.63□□□□□ -0.23
MRPL40-203ENST00000471259 DDX11Q96FC9 970 aa13.63□□□□□ -0.23
MRPL40-203ENST00000471259 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.63□□□□□ -0.23
MRPL40-203ENST00000471259 ANTXR1Q9H6X2 564 aa13.63□□□□□ -0.23
MRPL40-203ENST00000471259 ADAMTS5Q9UNA0 930 aa13.63□□□□□ -0.23
MRPL40-203ENST00000471259 SYNGAP1Q96PV0 1343 aa13.63□□□□□ -0.23
MRPL40-203ENST00000471259 MYH8P13535 1937 aa13.62□□□□□ -0.23
MRPL40-203ENST00000471259 DUSP11O75319 330 aaKnown RBP13.62□□□□□ -0.23
MRPL40-203ENST00000471259 PDE6AP16499 860 aa13.62□□□□□ -0.23
MRPL40-203ENST00000471259 ACLYP53396 1101 aa13.62□□□□□ -0.23
MRPL40-203ENST00000471259 GRIN2CQ14957 1233 aa13.62□□□□□ -0.23
MRPL40-203ENST00000471259 RAB30Q15771 203 aa13.62□□□□□ -0.23
MRPL40-203ENST00000471259 ZNF792Q3KQV3 632 aa13.62□□□□□ -0.23
MRPL40-203ENST00000471259 AKNAD1Q5T1N1 836 aa13.62□□□□□ -0.23
MRPL40-203ENST00000471259 MFSD5Q6N075 450 aa13.62□□□□□ -0.23
MRPL40-203ENST00000471259 PSRC1Q6PGN9 363 aaPredicted RBP13.62□□□□□ -0.23
MRPL40-203ENST00000471259 VTI1AQ96AJ9 217 aa13.62□□□□□ -0.23
MRPL40-203ENST00000471259 SEZ6LQ9BYH1 1024 aa13.62□□□□□ -0.23
MRPL40-203ENST00000471259 MSRAQ9UJ68 235 aa13.62□□□□□ -0.23
MRPL40-203ENST00000471259 PPP1R9AQ9ULJ8 1098 aa13.62□□□□□ -0.23
MRPL40-203ENST00000471259 ZNF532Q9HCE3 1301 aa13.62□□□□□ -0.23
MRPL40-203ENST00000471259 SMCHD1A6NHR9 2005 aa13.61□□□□□ -0.23
MRPL40-203ENST00000471259 VWA5AO00534 786 aa13.61□□□□□ -0.23
MRPL40-203ENST00000471259 RAD21O60216 631 aa13.61□□□□□ -0.23
MRPL40-203ENST00000471259 IFIT2P09913 472 aaKnown RBP13.61□□□□□ -0.23
MRPL40-203ENST00000471259 ZNF865P0CJ78 1059 aaPredicted RBP13.61□□□□□ -0.23
MRPL40-203ENST00000471259 COL9A1P20849 921 aa13.61□□□□□ -0.23
MRPL40-203ENST00000471259 FAAP100Q0VG06 881 aa13.61□□□□□ -0.23
MRPL40-203ENST00000471259 ZNF467Q7Z7K2 595 aaPredicted RBP13.61□□□□□ -0.23
MRPL40-203ENST00000471259 TEX13BQ9BXU2 312 aa13.61□□□□□ -0.23
MRPL40-203ENST00000471259 THEGQ9P2T0 379 aa13.61□□□□□ -0.23
MRPL40-203ENST00000471259 LAMA2P24043 3122 aaKnown RBP13.61□□□□□ -0.23
MRPL40-203ENST00000471259 A0A0U1RQG5 324 aaPredicted RBP13.6□□□□□ -0.23
MRPL40-203ENST00000471259 ADAMTS4O75173 837 aa13.6□□□□□ -0.23
MRPL40-203ENST00000471259 PGK2P07205 417 aa13.6□□□□□ -0.23
MRPL40-203ENST00000471259 CST5P28325 142 aaPredicted RBP13.6□□□□□ -0.23
MRPL40-203ENST00000471259 MRPS5P82675 430 aaKnown RBP13.6□□□□□ -0.23
MRPL40-203ENST00000471259 ZSCAN25Q6NSZ9 544 aa13.6□□□□□ -0.23
MRPL40-203ENST00000471259 SDR42E1Q8WUS8 393 aa13.6□□□□□ -0.23
MRPL40-203ENST00000471259 ABHD16BQ9H3Z7 469 aa13.6□□□□□ -0.23
MRPL40-203ENST00000471259 FBXO40Q9UH90 709 aa13.6□□□□□ -0.23
MRPL40-203ENST00000471259 PLXNA1Q9UIW2 1896 aa13.59□□□□□ -0.23
MRPL40-203ENST00000471259 APBB1O00213 710 aa13.59□□□□□ -0.23
MRPL40-203ENST00000471259 GOLIM4O00461 696 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms