RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 ATP8A2Q9NTI2 1148 aa10.89□□□□□ -0.67
SF3A1-206ENST00000471037 NRBP1Q9UHY1 535 aa10.89□□□□□ -0.67
SF3A1-206ENST00000471037 ATP11BQ9Y2G3 1177 aa10.89□□□□□ -0.67
SF3A1-206ENST00000471037 PARP14Q460N5 1801 aa10.88□□□□□ -0.67
SF3A1-206ENST00000471037 A0A0C4DFX4 3053 aa10.88□□□□□ -0.67
SF3A1-206ENST00000471037 SLC25A27O95847 323 aa10.88□□□□□ -0.67
SF3A1-206ENST00000471037 IFIT2P09913 472 aaKnown RBP10.88□□□□□ -0.67
SF3A1-206ENST00000471037 CYP2D6P10635 497 aa10.88□□□□□ -0.67
SF3A1-206ENST00000471037 AKR1B1P15121 316 aa10.88□□□□□ -0.67
SF3A1-206ENST00000471037 ADD2P35612 726 aa10.88□□□□□ -0.67
SF3A1-206ENST00000471037 NCAPG2Q86XI2 1143 aa10.88□□□□□ -0.67
SF3A1-206ENST00000471037 CLEC10AQ8IUN9 316 aa10.88□□□□□ -0.67
SF3A1-206ENST00000471037 DYNLL2Q96FJ2 89 aa10.88□□□□□ -0.67
SF3A1-206ENST00000471037 CCDC17Q96LX7 622 aa10.88□□□□□ -0.67
SF3A1-206ENST00000471037 ARMT1Q9H993 441 aa10.88□□□□□ -0.67
SF3A1-206ENST00000471037 PDLIM7Q9NR12 457 aa10.88□□□□□ -0.67
SF3A1-206ENST00000471037 ADAMTS5Q9UNA0 930 aa10.88□□□□□ -0.67
SF3A1-206ENST00000471037 APBB1O00213 710 aa10.87□□□□□ -0.67
SF3A1-206ENST00000471037 PRKAB2O43741 272 aa10.87□□□□□ -0.67
SF3A1-206ENST00000471037 MBD4O95243 580 aa10.87□□□□□ -0.67
SF3A1-206ENST00000471037 FCER1AP12319 257 aa10.87□□□□□ -0.67
SF3A1-206ENST00000471037 PLS1Q14651 629 aa10.87□□□□□ -0.67
SF3A1-206ENST00000471037 TMEM132BQ14DG7 1078 aa10.87□□□□□ -0.67
SF3A1-206ENST00000471037 LRRC41Q15345 812 aa10.87□□□□□ -0.67
SF3A1-206ENST00000471037 TRIM60Q495X7 471 aa10.87□□□□□ -0.67
SF3A1-206ENST00000471037 FAM47AQ5JRC9 791 aa10.87□□□□□ -0.67
SF3A1-206ENST00000471037 ZNF697Q5TEC3 545 aa10.87□□□□□ -0.67
SF3A1-206ENST00000471037 C12orf60Q5U649 245 aa10.87□□□□□ -0.67
SF3A1-206ENST00000471037 ANO1Q5XXA6 986 aa10.87□□□□□ -0.67
SF3A1-206ENST00000471037 C16orf86Q6ZW13 317 aa10.87□□□□□ -0.67
SF3A1-206ENST00000471037 RIOX2Q8IUF8 465 aa10.87□□□□□ -0.67
SF3A1-206ENST00000471037 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.87□□□□□ -0.67
SF3A1-206ENST00000471037 SPICE1Q8N0Z3 855 aa10.87□□□□□ -0.67
SF3A1-206ENST00000471037 LNPKQ9C0E8 428 aa10.87□□□□□ -0.67
SF3A1-206ENST00000471037 PAG1Q9NWQ8 432 aa10.87□□□□□ -0.67
SF3A1-206ENST00000471037 PHF24Q9UPV7 400 aa10.87□□□□□ -0.67
SF3A1-206ENST00000471037 MYH8P13535 1937 aa10.87□□□□□ -0.67
SF3A1-206ENST00000471037 DNAH12Q6ZR08 3092 aa10.87□□□□□ -0.67
SF3A1-206ENST00000471037 ATP5JP18859 108 aa10.86□□□□□ -0.67
SF3A1-206ENST00000471037 ADCYAP1R1P41586 468 aa10.86□□□□□ -0.67
SF3A1-206ENST00000471037 CDK8P49336 464 aa10.86□□□□□ -0.67
SF3A1-206ENST00000471037 UBE3CQ15386 1083 aa10.86□□□□□ -0.67
SF3A1-206ENST00000471037 SHHQ15465 462 aa10.86□□□□□ -0.67
SF3A1-206ENST00000471037 PRAMEF19Q5SWL8 479 aa10.86□□□□□ -0.67
SF3A1-206ENST00000471037 C9orf50Q5SZB4 431 aa10.86□□□□□ -0.67
SF3A1-206ENST00000471037 AMOTL1Q8IY63 956 aa10.86□□□□□ -0.67
SF3A1-206ENST00000471037 BADQ92934 168 aa10.86□□□□□ -0.67
SF3A1-206ENST00000471037 COL25A1Q9BXS0 654 aaPredicted RBP10.86□□□□□ -0.67
SF3A1-206ENST00000471037 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.86□□□□□ -0.67
SF3A1-206ENST00000471037 KANSL2Q9H9L4 492 aa10.86□□□□□ -0.67
SF3A1-206ENST00000471037 PRDM5Q9NQX1 630 aaPredicted RBP10.86□□□□□ -0.67
SF3A1-206ENST00000471037 DIS3Q9Y2L1 958 aaKnown RBP10.86□□□□□ -0.67
SF3A1-206ENST00000471037 UNC80Q8N2C7 3258 aa10.86□□□□□ -0.67
SF3A1-206ENST00000471037 TRIM43BA6NCK2 446 aa10.85□□□□□ -0.67
SF3A1-206ENST00000471037 USP17L12C9JPN9 530 aa10.85□□□□□ -0.67
SF3A1-206ENST00000471037 USP17L21D6R901 530 aa10.85□□□□□ -0.67
SF3A1-206ENST00000471037 SMIM22K7EJ46 135 aa10.85□□□□□ -0.67
SF3A1-206ENST00000471037 SMARCA5O60264 1052 aaPredicted RBP10.85□□□□□ -0.67
SF3A1-206ENST00000471037 RARBP10826 455 aa10.85□□□□□ -0.67
SF3A1-206ENST00000471037 EEF2P13639 858 aaKnown RBP10.85□□□□□ -0.67
SF3A1-206ENST00000471037 COPB2P35606 906 aa10.85□□□□□ -0.67
SF3A1-206ENST00000471037 SMAD3P84022 425 aaKnown RBP10.85□□□□□ -0.67
SF3A1-206ENST00000471037 KCTD2Q14681 263 aa10.85□□□□□ -0.67
SF3A1-206ENST00000471037 ZNF792Q3KQV3 632 aa10.85□□□□□ -0.67
SF3A1-206ENST00000471037 REPS2Q8NFH8 660 aa10.85□□□□□ -0.67
SF3A1-206ENST00000471037 TRIM43Q96BQ3 446 aaPredicted RBP10.85□□□□□ -0.67
SF3A1-206ENST00000471037 FAM161BQ96MY7 647 aa10.85□□□□□ -0.67
SF3A1-206ENST00000471037 MMP19Q99542 508 aa10.85□□□□□ -0.67
SF3A1-206ENST00000471037 HAUS7Q99871 368 aa10.85□□□□□ -0.67
SF3A1-206ENST00000471037 TINF2Q9BSI4 451 aa10.85□□□□□ -0.67
SF3A1-206ENST00000471037 XPNPEP3Q9NQH7 507 aa10.85□□□□□ -0.67
SF3A1-206ENST00000471037 FBXO28Q9NVF7 368 aa10.85□□□□□ -0.67
SF3A1-206ENST00000471037 ZNF214Q9UL59 606 aaPredicted RBP10.85□□□□□ -0.67
SF3A1-206ENST00000471037 PPP1R9AQ9ULJ8 1098 aa10.85□□□□□ -0.67
SF3A1-206ENST00000471037 COL11A1P12107 1806 aaPredicted RBP10.84□□□□□ -0.67
SF3A1-206ENST00000471037 GREB1LQ9C091 1923 aaPredicted RBP10.84□□□□□ -0.67
SF3A1-206ENST00000471037 BAZ2AQ9UIF9 1905 aaKnown RBP10.84□□□□□ -0.67
SF3A1-206ENST00000471037 CYP2D7A0A087X1C5 515 aa10.84□□□□□ -0.67
SF3A1-206ENST00000471037 VWA5AO00534 786 aa10.84□□□□□ -0.67
SF3A1-206ENST00000471037 MYCNP04198 464 aaPredicted RBP10.84□□□□□ -0.67
SF3A1-206ENST00000471037 STAT3P40763 770 aa10.84□□□□□ -0.67
SF3A1-206ENST00000471037 TLE2Q04725 743 aa10.84□□□□□ -0.67
SF3A1-206ENST00000471037 SLFNL1Q499Z3 407 aa10.84□□□□□ -0.67
SF3A1-206ENST00000471037 SH3RF1Q7Z6J0 888 aa10.84□□□□□ -0.67
SF3A1-206ENST00000471037 RNF180Q86T96 592 aa10.84□□□□□ -0.67
SF3A1-206ENST00000471037 FERMT2Q96AC1 680 aa10.84□□□□□ -0.67
SF3A1-206ENST00000471037 DDRGK1Q96HY6 314 aa10.84□□□□□ -0.67
SF3A1-206ENST00000471037 CDX2Q99626 313 aaPredicted RBP10.84□□□□□ -0.67
SF3A1-206ENST00000471037 BOLA2Q9H3K6 86 aa10.84□□□□□ -0.67
SF3A1-206ENST00000471037 GOPCQ9HD26 462 aa10.84□□□□□ -0.67
SF3A1-206ENST00000471037 ARPP21Q9UBL0 812 aaPredicted RBP10.84□□□□□ -0.67
SF3A1-206ENST00000471037 TACC3Q9Y6A5 838 aa10.84□□□□□ -0.67
SF3A1-206ENST00000471037 LAMA2P24043 3122 aaKnown RBP10.83□□□□□ -0.68
SF3A1-206ENST00000471037 TMEM265A0A087WTH1 108 aa10.83□□□□□ -0.68
SF3A1-206ENST00000471037 A0A1W2PQ45 241 aaPredicted RBP10.83□□□□□ -0.68
SF3A1-206ENST00000471037 A0A1W2PQY0 241 aa10.83□□□□□ -0.68
SF3A1-206ENST00000471037 KIAA0355O15063 1070 aa10.83□□□□□ -0.68
SF3A1-206ENST00000471037 ADAMTS4O75173 837 aa10.83□□□□□ -0.68
SF3A1-206ENST00000471037 CHGBP05060 677 aa10.83□□□□□ -0.68
SF3A1-206ENST00000471037 PGK2P07205 417 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms