RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 ATL3Q6DD88 541 aa6.65□□□□□ -1.34
HDAC8-216ENST00000470998 CYP4F22Q6NT55 531 aa6.65□□□□□ -1.34
HDAC8-216ENST00000470998 MRPL14Q6P1L8 145 aaKnown RBP6.65□□□□□ -1.34
HDAC8-216ENST00000470998 DHX32Q7L7V1 743 aaKnown RBP6.65□□□□□ -1.34
HDAC8-216ENST00000470998 KRT26Q7Z3Y9 468 aa6.65□□□□□ -1.34
HDAC8-216ENST00000470998 ZNF589Q86UQ0 364 aaPredicted RBP6.65□□□□□ -1.34
HDAC8-216ENST00000470998 C2orf69Q8N8R5 385 aa6.65□□□□□ -1.34
HDAC8-216ENST00000470998 KIFC2Q96AC6 838 aa6.65□□□□□ -1.34
HDAC8-216ENST00000470998 XAGE2Q96GT9 111 aa6.65□□□□□ -1.34
HDAC8-216ENST00000470998 CCDC85AQ96PX6 553 aaPredicted RBP6.65□□□□□ -1.34
HDAC8-216ENST00000470998 MPHOSPH8Q99549 860 aa6.65□□□□□ -1.34
HDAC8-216ENST00000470998 GREM2Q9H772 168 aa6.65□□□□□ -1.34
HDAC8-216ENST00000470998 GBA2Q9HCG7 927 aaPredicted RBP6.65□□□□□ -1.34
HDAC8-216ENST00000470998 CNNM1Q9NRU3 951 aa6.65□□□□□ -1.34
HDAC8-216ENST00000470998 ZDHHC9Q9Y397 364 aa6.65□□□□□ -1.34
HDAC8-216ENST00000470998 GNAT2P19087 354 aa6.64□□□□□ -1.35
HDAC8-216ENST00000470998 SYT1P21579 422 aa6.64□□□□□ -1.35
HDAC8-216ENST00000470998 LBX1P52954 281 aa6.64□□□□□ -1.35
HDAC8-216ENST00000470998 EVCP57679 992 aa6.64□□□□□ -1.35
HDAC8-216ENST00000470998 UBE2HP62256 183 aa6.64□□□□□ -1.35
HDAC8-216ENST00000470998 FMR1Q06787 632 aaKnown RBP eCLIP6.64□□□□□ -1.35
HDAC8-216ENST00000470998 CCDC173Q0VFZ6 552 aa6.64□□□□□ -1.35
HDAC8-216ENST00000470998 ZSCAN23Q3MJ62 389 aa6.64□□□□□ -1.35
HDAC8-216ENST00000470998 SLFNL1Q499Z3 407 aa6.64□□□□□ -1.35
HDAC8-216ENST00000470998 LRRC24Q50LG9 513 aa6.64□□□□□ -1.35
HDAC8-216ENST00000470998 C6orf118Q5T5N4 469 aa6.64□□□□□ -1.35
HDAC8-216ENST00000470998 C15orf52Q6ZUT6 534 aaKnown RBP6.64□□□□□ -1.35
HDAC8-216ENST00000470998 USP48Q86UV5 1035 aa6.64□□□□□ -1.35
HDAC8-216ENST00000470998 OGFOD1Q8N543 542 aa6.64□□□□□ -1.35
HDAC8-216ENST00000470998 VGLL2Q8N8G2 317 aa6.64□□□□□ -1.35
HDAC8-216ENST00000470998 JARID2Q92833 1246 aaPredicted RBP6.64□□□□□ -1.35
HDAC8-216ENST00000470998 GTF3C6Q969F1 213 aa6.64□□□□□ -1.35
HDAC8-216ENST00000470998 POM121Q96HA1 1249 aa6.64□□□□□ -1.35
HDAC8-216ENST00000470998 GMLQ99445 158 aa6.64□□□□□ -1.35
HDAC8-216ENST00000470998 MTA3Q9BTC8 594 aa6.64□□□□□ -1.35
HDAC8-216ENST00000470998 SCAND2PQ9GZW5 306 aaPredicted RBP6.64□□□□□ -1.35
HDAC8-216ENST00000470998 ZSCAN16Q9H4T2 348 aaPredicted RBP6.64□□□□□ -1.35
HDAC8-216ENST00000470998 ZNF408Q9H9D4 720 aa6.64□□□□□ -1.35
HDAC8-216ENST00000470998 MYOZ2Q9NPC6 264 aa6.64□□□□□ -1.35
HDAC8-216ENST00000470998 GMPR2Q9P2T1 348 aaKnown RBP6.64□□□□□ -1.35
HDAC8-216ENST00000470998 DACH1Q9UI36 760 aa6.64□□□□□ -1.35
HDAC8-216ENST00000470998 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.64□□□□□ -1.35
HDAC8-216ENST00000470998 ZNF804BA4D1E1 1349 aa6.64□□□□□ -1.35
HDAC8-216ENST00000470998 MAST3O60307 1309 aa6.64□□□□□ -1.35
HDAC8-216ENST00000470998 PDS5AQ29RF7 1337 aaKnown RBP6.64□□□□□ -1.35
HDAC8-216ENST00000470998 SHTN1A0MZ66 631 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 ESPNB1AK53 854 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 ERVH48-1M5A8F1 160 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 CYP21A2P08686 494 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 HSPD1P10809 573 aaKnown RBP6.63□□□□□ -1.35
HDAC8-216ENST00000470998 BMP2P12643 396 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 FGFR2P21802 821 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 GJB2P29033 226 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 HUNKP57058 714 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 TIMM10P62072 90 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 FKBP1AP62942 108 aaKnown RBP6.63□□□□□ -1.35
HDAC8-216ENST00000470998 KRT85P78386 507 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 FGD1P98174 961 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 PKP1Q13835 747 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 ALX1Q15699 326 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 ME3Q16798 604 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 ADCK5Q3MIX3 580 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 HS1BP3Q53T59 392 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 DACT2Q5SW24 774 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 NAA16Q6N069 864 aaPredicted RBP6.63□□□□□ -1.35
HDAC8-216ENST00000470998 RGMBQ6NW40 437 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 FAM43AQ8N2R8 423 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 MEIOBQ8N635 442 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 ZNF274Q96GC6 653 aaPredicted RBP6.63□□□□□ -1.35
HDAC8-216ENST00000470998 PURBQ96QR8 312 aaKnown RBP6.63□□□□□ -1.35
HDAC8-216ENST00000470998 TSEN34Q9BSV6 310 aaKnown RBP6.63□□□□□ -1.35
HDAC8-216ENST00000470998 KLF16Q9BXK1 252 aaPredicted RBP6.63□□□□□ -1.35
HDAC8-216ENST00000470998 KCNQ5Q9NR82 932 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 TMPRSS4Q9NRS4 437 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 GGA3Q9NZ52 723 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 HDAC9Q9UKV0 1011 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 PCDHB11Q9Y5F2 797 aa6.63□□□□□ -1.35
HDAC8-216ENST00000470998 AK9Q5TCS8 1911 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 THSD7BQ9C0I4 1608 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 PFKFB2O60825 505 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 PRPF40AO75400 957 aaKnown RBP6.62□□□□□ -1.35
HDAC8-216ENST00000470998 EGFRP00533 1210 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 PCP11498 1178 aaKnown RBP6.62□□□□□ -1.35
HDAC8-216ENST00000470998 XRCC6P12956 609 aaKnown RBP eCLIP6.62□□□□□ -1.35
HDAC8-216ENST00000470998 NF2P35240 595 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 ADD2P35612 726 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 RCAN1P53805 252 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 CHRNDQ07001 517 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 MAP3K12Q12852 859 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 TRDNQ13061 729 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 GRM1Q13255 1194 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 TOB2Q14106 344 aaPredicted RBP6.62□□□□□ -1.35
HDAC8-216ENST00000470998 CCDC183Q5T5S1 534 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 ANGEL2Q5VTE6 544 aaKnown RBP6.62□□□□□ -1.35
HDAC8-216ENST00000470998 LARP1BQ659C4 914 aaKnown RBP6.62□□□□□ -1.35
HDAC8-216ENST00000470998 TTLL5Q6EMB2 1281 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 CAVIN1Q6NZI2 390 aaKnown RBP6.62□□□□□ -1.35
HDAC8-216ENST00000470998 LRSAM1Q6UWE0 723 aa6.62□□□□□ -1.35
HDAC8-216ENST00000470998 RALYLQ86SE5 291 aaKnown RBP6.62□□□□□ -1.35
HDAC8-216ENST00000470998 RNF135Q8IUD6 432 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms