RNA–Protein interactions for RNA: ENST00000470771.1

ABCA4-204, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 3

Gene ABCA4, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-204ENST00000470771 CTDP1Q9Y5B0 961 aaPredicted RBP16.32■□□□□ 0.2
ABCA4-204ENST00000470771 MYH7P12883 1935 aa16.31■□□□□ 0.2
ABCA4-204ENST00000470771 BAZ2AQ9UIF9 1905 aaKnown RBP16.31■□□□□ 0.2
ABCA4-204ENST00000470771 F5H6K3 240 aa16.31■□□□□ 0.2
ABCA4-204ENST00000470771 VWA5AO00534 786 aa16.31■□□□□ 0.2
ABCA4-204ENST00000470771 STAT3P40763 770 aa16.31■□□□□ 0.2
ABCA4-204ENST00000470771 KLRC3Q07444 240 aa16.31■□□□□ 0.2
ABCA4-204ENST00000470771 KCTD2Q14681 263 aa16.31■□□□□ 0.2
ABCA4-204ENST00000470771 ZMYM1Q5SVZ6 1142 aa16.31■□□□□ 0.2
ABCA4-204ENST00000470771 FAM83BQ5T0W9 1011 aa16.31■□□□□ 0.2
ABCA4-204ENST00000470771 DIS3LQ8TF46 1054 aaKnown RBP16.31■□□□□ 0.2
ABCA4-204ENST00000470771 EVI5LQ96CN4 794 aa16.31■□□□□ 0.2
ABCA4-204ENST00000470771 RWDD1Q9H446 243 aaPredicted RBP16.31■□□□□ 0.2
ABCA4-204ENST00000470771 PPP1R9AQ9ULJ8 1098 aa16.31■□□□□ 0.2
ABCA4-204ENST00000470771 ADAMTS5Q9UNA0 930 aa16.31■□□□□ 0.2
ABCA4-204ENST00000470771 ROBO3Q96MS0 1386 aa16.3■□□□□ 0.2
ABCA4-204ENST00000470771 TTLL1O95922 423 aa16.3■□□□□ 0.2
ABCA4-204ENST00000470771 TSPY3P0CV98 308 aa16.3■□□□□ 0.2
ABCA4-204ENST00000470771 TSPY8P0CW00 308 aa16.3■□□□□ 0.2
ABCA4-204ENST00000470771 CYP2C19P33261 490 aa16.3■□□□□ 0.2
ABCA4-204ENST00000470771 TMEM132BQ14DG7 1078 aa16.3■□□□□ 0.2
ABCA4-204ENST00000470771 LHX8Q68G74 356 aa16.3■□□□□ 0.2
ABCA4-204ENST00000470771 PRPF38AQ8NAV1 312 aaKnown RBP16.3■□□□□ 0.2
ABCA4-204ENST00000470771 NPLOC4Q8TAT6 608 aa16.3■□□□□ 0.2
ABCA4-204ENST00000470771 OTUD7AQ8TE49 926 aaPredicted RBP16.3■□□□□ 0.2
ABCA4-204ENST00000470771 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.3■□□□□ 0.2
ABCA4-204ENST00000470771 FLRT1Q9NZU1 646 aa16.3■□□□□ 0.2
ABCA4-204ENST00000470771 STAP2Q9UGK3 403 aa16.3■□□□□ 0.2
ABCA4-204ENST00000470771 DDX20Q9UHI6 824 aaKnown RBP16.3■□□□□ 0.2
ABCA4-204ENST00000470771 PLXNB2O15031 1838 aa16.29■□□□□ 0.2
ABCA4-204ENST00000470771 ZBED4O75132 1171 aa16.29■□□□□ 0.2
ABCA4-204ENST00000470771 RIOX2Q8IUF8 465 aa16.29■□□□□ 0.2
ABCA4-204ENST00000470771 ARRDC4Q8NCT1 418 aa16.29■□□□□ 0.2
ABCA4-204ENST00000470771 MKL1Q969V6 931 aa16.29■□□□□ 0.2
ABCA4-204ENST00000470771 MMP19Q99542 508 aa16.29■□□□□ 0.2
ABCA4-204ENST00000470771 SLF1Q9BQI6 1058 aa16.29■□□□□ 0.2
ABCA4-204ENST00000470771 EPB41L4AQ9HCS5 686 aaPredicted RBP16.29■□□□□ 0.2
ABCA4-204ENST00000470771 TRIOBPQ9H2D6 2365 aa16.29■□□□□ 0.2
ABCA4-204ENST00000470771 MYH8P13535 1937 aa16.29■□□□□ 0.2
ABCA4-204ENST00000470771 A0A1W2PPC1 479 aa16.28■□□□□ 0.2
ABCA4-204ENST00000470771 PRDM1O75626 825 aa16.28■□□□□ 0.2
ABCA4-204ENST00000470771 FXR1P51114 621 aaKnown RBP eCLIP16.28■□□□□ 0.2
ABCA4-204ENST00000470771 PDE1AP54750 535 aa16.28■□□□□ 0.2
ABCA4-204ENST00000470771 PPARAQ07869 468 aa16.28■□□□□ 0.2
ABCA4-204ENST00000470771 C7orf61Q8IZ16 206 aa16.28■□□□□ 0.2
ABCA4-204ENST00000470771 NEDD1Q8NHV4 660 aa16.28■□□□□ 0.2
ABCA4-204ENST00000470771 SEC62Q99442 399 aaKnown RBP16.28■□□□□ 0.2
ABCA4-204ENST00000470771 TEX13BQ9BXU2 312 aa16.28■□□□□ 0.2
ABCA4-204ENST00000470771 FBXO28Q9NVF7 368 aa16.28■□□□□ 0.2
ABCA4-204ENST00000470771 MTMR4Q9NYA4 1195 aa16.28■□□□□ 0.2
ABCA4-204ENST00000470771 RBM27Q9P2N5 1060 aaKnown RBP16.28■□□□□ 0.2
ABCA4-204ENST00000470771 FEM1BQ9UK73 627 aa16.28■□□□□ 0.2
ABCA4-204ENST00000470771 NDUFB10O96000 172 aa16.27■□□□□ 0.2
ABCA4-204ENST00000470771 MNX1P50219 401 aaPredicted RBP16.27■□□□□ 0.2
ABCA4-204ENST00000470771 TFAP4Q01664 338 aa16.27■□□□□ 0.2
ABCA4-204ENST00000470771 CEP95Q96GE4 821 aa16.27■□□□□ 0.2
ABCA4-204ENST00000470771 HELLSQ9NRZ9 838 aa16.27■□□□□ 0.2
ABCA4-204ENST00000470771 DIS3Q9Y2L1 958 aaKnown RBP16.27■□□□□ 0.2
ABCA4-204ENST00000470771 IGKV6D-41A0A0C4DH26 115 aa16.26■□□□□ 0.19
ABCA4-204ENST00000470771 DNM1LO00429 736 aa16.26■□□□□ 0.19
ABCA4-204ENST00000470771 SEPT4O43236 478 aa16.26■□□□□ 0.19
ABCA4-204ENST00000470771 COBLO75128 1261 aa16.26■□□□□ 0.19
ABCA4-204ENST00000470771 FDX1P10109 184 aa16.26■□□□□ 0.19
ABCA4-204ENST00000470771 GMCL1P1Q8NEA9 526 aa16.26■□□□□ 0.19
ABCA4-204ENST00000470771 DDX11Q96FC9 970 aa16.26■□□□□ 0.19
ABCA4-204ENST00000470771 MAML3Q96JK9 1138 aa16.26■□□□□ 0.19
ABCA4-204ENST00000470771 NUP88Q99567 741 aaPredicted RBP16.26■□□□□ 0.19
ABCA4-204ENST00000470771 NRBP1Q9UHY1 535 aa16.26■□□□□ 0.19
ABCA4-204ENST00000470771 TSPY2A6NKD2 308 aa16.25■□□□□ 0.19
ABCA4-204ENST00000470771 TRIM6-TRIM34B2RNG4 842 aa16.25■□□□□ 0.19
ABCA4-204ENST00000470771 COL6A1P12109 1028 aa16.25■□□□□ 0.19
ABCA4-204ENST00000470771 CYBAP13498 195 aa16.25■□□□□ 0.19
ABCA4-204ENST00000470771 SNRNP48Q6IEG0 339 aaKnown RBP16.25■□□□□ 0.19
ABCA4-204ENST00000470771 CHURC1Q8WUH1 139 aa16.25■□□□□ 0.19
ABCA4-204ENST00000470771 KIFC2Q96AC6 838 aa16.25■□□□□ 0.19
ABCA4-204ENST00000470771 SENP6Q9GZR1 1112 aaPredicted RBP16.25■□□□□ 0.19
ABCA4-204ENST00000470771 ZNF214Q9UL59 606 aaPredicted RBP16.25■□□□□ 0.19
ABCA4-204ENST00000470771 ISY1Q9ULR0 285 aaKnown RBP16.25■□□□□ 0.19
ABCA4-204ENST00000470771 SALL3Q9BXA9 1300 aa16.24■□□□□ 0.19
ABCA4-204ENST00000470771 KBTBD13C9JR72 458 aa16.24■□□□□ 0.19
ABCA4-204ENST00000470771 ATP2A1O14983 1001 aa16.24■□□□□ 0.19
ABCA4-204ENST00000470771 IGHA2P01877 340 aa16.24■□□□□ 0.19
ABCA4-204ENST00000470771 BMP3P12645 472 aa16.24■□□□□ 0.19
ABCA4-204ENST00000470771 MFAP1P55081 439 aaKnown RBP16.24■□□□□ 0.19
ABCA4-204ENST00000470771 MCMDC2Q4G0Z9 681 aa16.24■□□□□ 0.19
ABCA4-204ENST00000470771 FAM47AQ5JRC9 791 aa16.24■□□□□ 0.19
ABCA4-204ENST00000470771 SLFN13Q68D06 897 aa16.24■□□□□ 0.19
ABCA4-204ENST00000470771 FBXO40Q9UH90 709 aa16.24■□□□□ 0.19
ABCA4-204ENST00000470771 CNPY2Q9Y2B0 182 aa16.24■□□□□ 0.19
ABCA4-204ENST00000470771 RANBP6O60518 1105 aaKnown RBP16.23■□□□□ 0.19
ABCA4-204ENST00000470771 MYCNP04198 464 aaPredicted RBP16.23■□□□□ 0.19
ABCA4-204ENST00000470771 BMP8BP34820 402 aa16.23■□□□□ 0.19
ABCA4-204ENST00000470771 SLC4A3P48751 1232 aa16.23■□□□□ 0.19
ABCA4-204ENST00000470771 OAZ1P54368 228 aa16.23■□□□□ 0.19
ABCA4-204ENST00000470771 IKQ13123 557 aaPredicted RBP16.23■□□□□ 0.19
ABCA4-204ENST00000470771 ALX1Q15699 326 aa16.23■□□□□ 0.19
ABCA4-204ENST00000470771 CPXCR1Q8N123 301 aa16.23■□□□□ 0.19
ABCA4-204ENST00000470771 MSL3Q8N5Y2 521 aaKnown RBP16.23■□□□□ 0.19
ABCA4-204ENST00000470771 TRPV1Q8NER1 839 aa16.23■□□□□ 0.19
ABCA4-204ENST00000470771 GMCL1Q96IK5 515 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms