RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 PLS1Q14651 629 aa14.69□□□□□ -0.06
LSM2-209ENST00000470083 MICALL1Q8N3F8 863 aa14.69□□□□□ -0.06
LSM2-209ENST00000470083 KLHDC9Q8NEP7 349 aa14.69□□□□□ -0.06
LSM2-209ENST00000470083 MRS2Q9HD23 443 aa14.69□□□□□ -0.06
LSM2-209ENST00000470083 ELP1O95163 1332 aa14.68□□□□□ -0.06
LSM2-209ENST00000470083 SYNRGQ9UMZ2 1314 aa14.68□□□□□ -0.06
LSM2-209ENST00000470083 SRGAP3O43295 1099 aa14.68□□□□□ -0.06
LSM2-209ENST00000470083 DSG3P32926 999 aa14.68□□□□□ -0.06
LSM2-209ENST00000470083 CDK7P50613 346 aa14.68□□□□□ -0.06
LSM2-209ENST00000470083 CCSAPQ6IQ19 270 aaPredicted RBP14.68□□□□□ -0.06
LSM2-209ENST00000470083 ALYREFQ86V81 257 aaKnown RBP14.68□□□□□ -0.06
LSM2-209ENST00000470083 C11orf16Q9NQ32 467 aa14.68□□□□□ -0.06
LSM2-209ENST00000470083 DIS3Q9Y2L1 958 aaKnown RBP14.68□□□□□ -0.06
LSM2-209ENST00000470083 A0A1W2PRG0 241 aa14.67□□□□□ -0.06
LSM2-209ENST00000470083 APBB1O00213 710 aa14.67□□□□□ -0.06
LSM2-209ENST00000470083 SLC25A27O95847 323 aa14.67□□□□□ -0.06
LSM2-209ENST00000470083 SHMT1P34896 483 aa14.67□□□□□ -0.06
LSM2-209ENST00000470083 DYNLL1P63167 89 aaKnown RBP14.67□□□□□ -0.06
LSM2-209ENST00000470083 MTX1Q13505 466 aa14.67□□□□□ -0.06
LSM2-209ENST00000470083 SEPT2Q15019 361 aa14.67□□□□□ -0.06
LSM2-209ENST00000470083 SKIV2LQ15477 1246 aaKnown RBP14.67□□□□□ -0.06
LSM2-209ENST00000470083 KCNA10Q16322 511 aa14.67□□□□□ -0.06
LSM2-209ENST00000470083 TTC6Q86TZ1 520 aa14.67□□□□□ -0.06
LSM2-209ENST00000470083 CERS3Q8IU89 383 aa14.67□□□□□ -0.06
LSM2-209ENST00000470083 GLT1D1Q96MS3 346 aa14.67□□□□□ -0.06
LSM2-209ENST00000470083 MMP19Q99542 508 aa14.67□□□□□ -0.06
LSM2-209ENST00000470083 IL23AQ9NPF7 189 aa14.67□□□□□ -0.06
LSM2-209ENST00000470083 SNRKQ9NRH2 765 aa14.67□□□□□ -0.06
LSM2-209ENST00000470083 CNPY2Q9Y2B0 182 aa14.67□□□□□ -0.06
LSM2-209ENST00000470083 TRANK1O15050 2925 aa14.67□□□□□ -0.06
LSM2-209ENST00000470083 PLXNA1Q9UIW2 1896 aa14.66□□□□□ -0.06
LSM2-209ENST00000470083 CYP2E1P05181 493 aaPredicted RBP14.66□□□□□ -0.06
LSM2-209ENST00000470083 PGK2P07205 417 aa14.66□□□□□ -0.06
LSM2-209ENST00000470083 CST5P28325 142 aaPredicted RBP14.66□□□□□ -0.06
LSM2-209ENST00000470083 USP5P45974 858 aa14.66□□□□□ -0.06
LSM2-209ENST00000470083 ZNF792Q3KQV3 632 aa14.66□□□□□ -0.06
LSM2-209ENST00000470083 PPP2R2DQ66LE6 453 aa14.66□□□□□ -0.06
LSM2-209ENST00000470083 ATG4CQ96DT6 458 aa14.66□□□□□ -0.06
LSM2-209ENST00000470083 MEIS3Q99687 375 aa14.66□□□□□ -0.06
LSM2-209ENST00000470083 PPP1R12CQ9BZL4 782 aa14.66□□□□□ -0.06
LSM2-209ENST00000470083 A0A0G2JMZ2 1700 aa14.66□□□□□ -0.06
LSM2-209ENST00000470083 TCF20Q9UGU0 1960 aaKnown RBP14.65□□□□□ -0.06
LSM2-209ENST00000470083 FLOT1O75955 427 aa14.65□□□□□ -0.06
LSM2-209ENST00000470083 FGBP02675 491 aa14.65□□□□□ -0.06
LSM2-209ENST00000470083 POU3F3P20264 500 aaPredicted RBP14.65□□□□□ -0.06
LSM2-209ENST00000470083 KCTD2Q14681 263 aa14.65□□□□□ -0.06
LSM2-209ENST00000470083 TMEM132BQ14DG7 1078 aa14.65□□□□□ -0.06
LSM2-209ENST00000470083 ALDH1L2Q3SY69 923 aa14.65□□□□□ -0.06
LSM2-209ENST00000470083 FAM126BQ8IXS8 530 aa14.65□□□□□ -0.06
LSM2-209ENST00000470083 CDCA7LQ96GN5 454 aa14.65□□□□□ -0.06
LSM2-209ENST00000470083 SNX27Q96L92 541 aa14.65□□□□□ -0.06
LSM2-209ENST00000470083 COG5Q9UP83 839 aa14.65□□□□□ -0.06
LSM2-209ENST00000470083 FOCADQ5VW36 1801 aa14.64□□□□□ -0.07
LSM2-209ENST00000470083 A0A0U1RQG5 324 aaPredicted RBP14.64□□□□□ -0.07
LSM2-209ENST00000470083 MYADML2A6NDP7 307 aa14.64□□□□□ -0.07
LSM2-209ENST00000470083 FAM86C2PA6NEL3 165 aa14.64□□□□□ -0.07
LSM2-209ENST00000470083 ARVCFO00192 962 aa14.64□□□□□ -0.07
LSM2-209ENST00000470083 TLL1O43897 1013 aa14.64□□□□□ -0.07
LSM2-209ENST00000470083 DUSP11O75319 330 aaKnown RBP14.64□□□□□ -0.07
LSM2-209ENST00000470083 CYP7A1P22680 504 aa14.64□□□□□ -0.07
LSM2-209ENST00000470083 CYP2C18P33260 490 aa14.64□□□□□ -0.07
LSM2-209ENST00000470083 KIAA1755Q5JYT7 1200 aa14.64□□□□□ -0.07
LSM2-209ENST00000470083 TTC39AQ5SRH9 613 aa14.64□□□□□ -0.07
LSM2-209ENST00000470083 MSL3Q8N5Y2 521 aaKnown RBP14.64□□□□□ -0.07
LSM2-209ENST00000470083 PCSK9Q8NBP7 692 aaKnown RBP14.64□□□□□ -0.07
LSM2-209ENST00000470083 SMC4Q9NTJ3 1288 aa14.64□□□□□ -0.07
LSM2-209ENST00000470083 FAM184BQ9ULE4 1060 aa14.64□□□□□ -0.07
LSM2-209ENST00000470083 PCDHA11Q9Y5I1 949 aa14.64□□□□□ -0.07
LSM2-209ENST00000470083 MTCH2Q9Y6C9 303 aa14.64□□□□□ -0.07
LSM2-209ENST00000470083 SMCHD1A6NHR9 2005 aa14.64□□□□□ -0.07
LSM2-209ENST00000470083 TLR3O15455 904 aaKnown RBP14.63□□□□□ -0.07
LSM2-209ENST00000470083 GTPBP6O43824 516 aaPredicted RBP14.63□□□□□ -0.07
LSM2-209ENST00000470083 PLCD1P51178 756 aa14.63□□□□□ -0.07
LSM2-209ENST00000470083 RABGGTBP53611 331 aa14.63□□□□□ -0.07
LSM2-209ENST00000470083 GABPAQ06546 454 aa14.63□□□□□ -0.07
LSM2-209ENST00000470083 OTOP2Q7RTS6 562 aa14.63□□□□□ -0.07
LSM2-209ENST00000470083 RIOX2Q8IUF8 465 aa14.63□□□□□ -0.07
LSM2-209ENST00000470083 MIGA1Q8NAN2 632 aa14.63□□□□□ -0.07
LSM2-209ENST00000470083 KHSRPQ92945 711 aaKnown RBP eCLIP14.63□□□□□ -0.07
LSM2-209ENST00000470083 PIH1D3Q9NQM4 214 aaKnown RBP14.63□□□□□ -0.07
LSM2-209ENST00000470083 CD4P01730 458 aa14.62□□□□□ -0.07
LSM2-209ENST00000470083 ASGR1P07306 291 aa14.62□□□□□ -0.07
LSM2-209ENST00000470083 C6orf222P0C671 652 aaPredicted RBP14.62□□□□□ -0.07
LSM2-209ENST00000470083 CCDC158Q5M9N0 1113 aa14.62□□□□□ -0.07
LSM2-209ENST00000470083 VTI1AQ96AJ9 217 aa14.62□□□□□ -0.07
LSM2-209ENST00000470083 ZNF512BQ96KM6 892 aaPredicted RBP14.62□□□□□ -0.07
LSM2-209ENST00000470083 CDK5RAP2Q96SN8 1893 aa14.62□□□□□ -0.07
LSM2-209ENST00000470083 ADAMTS5Q9UNA0 930 aa14.62□□□□□ -0.07
LSM2-209ENST00000470083 SLC4A7Q9Y6M7 1214 aa14.62□□□□□ -0.07
LSM2-209ENST00000470083 PRRC2BQ5JSZ5 2229 aaKnown RBP14.62□□□□□ -0.07
LSM2-209ENST00000470083 PI4K2BG5E9Z4 385 aa14.61□□□□□ -0.07
LSM2-209ENST00000470083 MPHOSPH10O00566 681 aaKnown RBP14.61□□□□□ -0.07
LSM2-209ENST00000470083 SNAI1O95863 264 aaPredicted RBP14.61□□□□□ -0.07
LSM2-209ENST00000470083 GNAI3P08754 354 aa14.61□□□□□ -0.07
LSM2-209ENST00000470083 MYOGP15173 224 aa14.61□□□□□ -0.07
LSM2-209ENST00000470083 COPB2P35606 906 aa14.61□□□□□ -0.07
LSM2-209ENST00000470083 ZAP70P43403 619 aa14.61□□□□□ -0.07
LSM2-209ENST00000470083 MRE11P49959 708 aa14.61□□□□□ -0.07
LSM2-209ENST00000470083 G3BP1Q13283 466 aaKnown RBP eCLIP14.61□□□□□ -0.07
LSM2-209ENST00000470083 SPICE1Q8N0Z3 855 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms