RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ZNF541Q9H0D2 1346 aa20.87■□□□□ 0.93
SMC4-211ENST00000469858 DICER1Q9UPY3 1922 aaKnown RBP20.87■□□□□ 0.93
SMC4-211ENST00000469858 EEF2P13639 858 aaKnown RBP20.86■□□□□ 0.93
SMC4-211ENST00000469858 RILPL1Q5EBL4 403 aa20.86■□□□□ 0.93
SMC4-211ENST00000469858 HEATR3Q7Z4Q2 680 aa20.86■□□□□ 0.93
SMC4-211ENST00000469858 FAM83AQ86UY5 434 aa20.86■□□□□ 0.93
SMC4-211ENST00000469858 HOMER1Q86YM7 354 aa20.86■□□□□ 0.93
SMC4-211ENST00000469858 CCAR1Q8IX12 1150 aaKnown RBP20.86■□□□□ 0.93
SMC4-211ENST00000469858 UBA5Q9GZZ9 404 aa20.86■□□□□ 0.93
SMC4-211ENST00000469858 CABP5Q9NP86 173 aa20.86■□□□□ 0.93
SMC4-211ENST00000469858 NR1I2O75469 434 aa20.86■□□□□ 0.93
SMC4-211ENST00000469858 MMP14P50281 582 aa20.86■□□□□ 0.93
SMC4-211ENST00000469858 TOB1P50616 345 aaPredicted RBP20.86■□□□□ 0.93
SMC4-211ENST00000469858 ICA1Q05084 483 aa20.86■□□□□ 0.93
SMC4-211ENST00000469858 SLC39A14Q15043 492 aa20.86■□□□□ 0.93
SMC4-211ENST00000469858 WWC2Q6AWC2 1192 aa20.86■□□□□ 0.93
SMC4-211ENST00000469858 CDAN1Q8IWY9 1227 aa20.86■□□□□ 0.93
SMC4-211ENST00000469858 VAT1LQ9HCJ6 419 aa20.86■□□□□ 0.93
SMC4-211ENST00000469858 GPCPD1Q9NPB8 672 aa20.86■□□□□ 0.93
SMC4-211ENST00000469858 SH3GLB2Q9NR46 395 aa20.86■□□□□ 0.93
SMC4-211ENST00000469858 NYAP2Q9P242 653 aa20.86■□□□□ 0.93
SMC4-211ENST00000469858 FAM205CA6NFA0 338 aa20.85■□□□□ 0.93
SMC4-211ENST00000469858 GH2P01242 217 aa20.85■□□□□ 0.93
SMC4-211ENST00000469858 SMARCA1P28370 1054 aa20.85■□□□□ 0.93
SMC4-211ENST00000469858 MARCKSP29966 332 aaPredicted RBP20.85■□□□□ 0.93
SMC4-211ENST00000469858 RRP1BQ14684 758 aaKnown RBP20.85■□□□□ 0.93
SMC4-211ENST00000469858 RRP36Q96EU6 259 aaKnown RBP20.85■□□□□ 0.93
SMC4-211ENST00000469858 GRPEL1Q9HAV7 217 aa20.85■□□□□ 0.93
SMC4-211ENST00000469858 RAD21O60216 631 aa20.85■□□□□ 0.93
SMC4-211ENST00000469858 JAG1P78504 1218 aa20.85■□□□□ 0.93
SMC4-211ENST00000469858 ZNF543Q08ER8 600 aa20.85■□□□□ 0.93
SMC4-211ENST00000469858 PTPAQ15257 358 aa20.85■□□□□ 0.93
SMC4-211ENST00000469858 CCDC96Q2M329 555 aa20.85■□□□□ 0.93
SMC4-211ENST00000469858 ADALQ6DHV7 355 aa20.85■□□□□ 0.93
SMC4-211ENST00000469858 DPF2Q92785 391 aa20.85■□□□□ 0.93
SMC4-211ENST00000469858 NUP62CLQ9H1M0 184 aa20.85■□□□□ 0.93
SMC4-211ENST00000469858 GOLPH3LQ9H4A5 285 aa20.85■□□□□ 0.93
SMC4-211ENST00000469858 SEC63Q9UGP8 760 aaKnown RBP20.85■□□□□ 0.93
SMC4-211ENST00000469858 CNOT7Q9UIV1 285 aaKnown RBP20.85■□□□□ 0.93
SMC4-211ENST00000469858 SCAF8Q9UPN6 1271 aaKnown RBP20.85■□□□□ 0.93
SMC4-211ENST00000469858 LETM1O95202 739 aaPredicted RBP20.84■□□□□ 0.93
SMC4-211ENST00000469858 ATP2B1P20020 1258 aa20.84■□□□□ 0.93
SMC4-211ENST00000469858 CALML3P27482 149 aa20.84■□□□□ 0.93
SMC4-211ENST00000469858 MRE11P49959 708 aa20.84■□□□□ 0.93
SMC4-211ENST00000469858 EARS2Q5JPH6 523 aaKnown RBP20.84■□□□□ 0.93
SMC4-211ENST00000469858 TYW1BQ6NUM6 668 aa20.84■□□□□ 0.93
SMC4-211ENST00000469858 CCDC73Q6ZRK6 1079 aa20.84■□□□□ 0.93
SMC4-211ENST00000469858 SAMD7Q7Z3H4 446 aa20.84■□□□□ 0.93
SMC4-211ENST00000469858 FSIP1Q8NA03 581 aa20.84■□□□□ 0.93
SMC4-211ENST00000469858 PIGSQ96S52 555 aa20.84■□□□□ 0.93
SMC4-211ENST00000469858 DDX19AQ9NUU7 478 aaKnown RBP20.84■□□□□ 0.93
SMC4-211ENST00000469858 BARHL2Q9NY43 387 aa20.84■□□□□ 0.93
SMC4-211ENST00000469858 SBF1O95248 1867 aa20.84■□□□□ 0.93
SMC4-211ENST00000469858 UTRNP46939 3433 aa20.84■□□□□ 0.93
SMC4-211ENST00000469858 TBC1D10BQ4KMP7 808 aaPredicted RBP20.83■□□□□ 0.93
SMC4-211ENST00000469858 CCDC148Q8NFR7 591 aa20.83■□□□□ 0.93
SMC4-211ENST00000469858 TNFRSF25Q93038 417 aa20.83■□□□□ 0.93
SMC4-211ENST00000469858 MKL1Q969V6 931 aa20.83■□□□□ 0.93
SMC4-211ENST00000469858 RIOX1Q9H6W3 641 aa20.83■□□□□ 0.93
SMC4-211ENST00000469858 STXBP3O00186 592 aa20.83■□□□□ 0.92
SMC4-211ENST00000469858 TNNI2P48788 182 aa20.83■□□□□ 0.92
SMC4-211ENST00000469858 CAMK4Q16566 473 aa20.83■□□□□ 0.92
SMC4-211ENST00000469858 NOM1Q5C9Z4 860 aaKnown RBP20.83■□□□□ 0.92
SMC4-211ENST00000469858 SIAH1Q8IUQ4 282 aa20.83■□□□□ 0.92
SMC4-211ENST00000469858 PCDHB6Q9Y5E3 794 aa20.83■□□□□ 0.92
SMC4-211ENST00000469858 A0A1W2PQ27 194 aa20.82■□□□□ 0.92
SMC4-211ENST00000469858 A0A1W2PQ64 194 aa20.82■□□□□ 0.92
SMC4-211ENST00000469858 A0A1W2PQD8 194 aa20.82■□□□□ 0.92
SMC4-211ENST00000469858 ADAMTS3O15072 1205 aa20.82■□□□□ 0.92
SMC4-211ENST00000469858 PPP6R2O75170 966 aa20.82■□□□□ 0.92
SMC4-211ENST00000469858 LMNB1P20700 586 aa20.82■□□□□ 0.92
SMC4-211ENST00000469858 GPATCH4Q5T3I0 446 aaKnown RBP20.82■□□□□ 0.92
SMC4-211ENST00000469858 KCTD1Q719H9 257 aa20.82■□□□□ 0.92
SMC4-211ENST00000469858 MIGA2Q7L4E1 593 aa20.82■□□□□ 0.92
SMC4-211ENST00000469858 BLIDQ8IZY5 108 aa20.82■□□□□ 0.92
SMC4-211ENST00000469858 JMYQ8N9B5 988 aa20.82■□□□□ 0.92
SMC4-211ENST00000469858 MRPS27Q92552 414 aaKnown RBP20.82■□□□□ 0.92
SMC4-211ENST00000469858 RASA3Q14644 834 aa20.81■□□□□ 0.92
SMC4-211ENST00000469858 TTBK2Q6IQ55 1244 aa20.81■□□□□ 0.92
SMC4-211ENST00000469858 PCDHA4Q9UN74 947 aa20.81■□□□□ 0.92
SMC4-211ENST00000469858 XRCC6P12956 609 aaKnown RBP eCLIP20.81■□□□□ 0.92
SMC4-211ENST00000469858 NAPAP54920 295 aa20.81■□□□□ 0.92
SMC4-211ENST00000469858 TNFAIP1Q13829 316 aa20.81■□□□□ 0.92
SMC4-211ENST00000469858 KIF4BQ2VIQ3 1234 aa20.81■□□□□ 0.92
SMC4-211ENST00000469858 AXDND1Q5T1B0 1012 aaPredicted RBP20.81■□□□□ 0.92
SMC4-211ENST00000469858 SLFN13Q68D06 897 aa20.81■□□□□ 0.92
SMC4-211ENST00000469858 TNMDQ9H2S6 317 aa20.81■□□□□ 0.92
SMC4-211ENST00000469858 TSPY26PQ9H489 355 aa20.81■□□□□ 0.92
SMC4-211ENST00000469858 CLSTN2Q9H4D0 955 aa20.81■□□□□ 0.92
SMC4-211ENST00000469858 NOL7Q9UMY1 257 aaKnown RBP20.81■□□□□ 0.92
SMC4-211ENST00000469858 ASTN2O75129 1339 aaPredicted RBP20.8■□□□□ 0.92
SMC4-211ENST00000469858 A0A1B0GVL5 298 aa20.8■□□□□ 0.92
SMC4-211ENST00000469858 TBC1D12O60347 775 aa20.8■□□□□ 0.92
SMC4-211ENST00000469858 FAM160A1Q05DH4 1040 aa20.8■□□□□ 0.92
SMC4-211ENST00000469858 PIK3AP1Q6ZUJ8 805 aa20.8■□□□□ 0.92
SMC4-211ENST00000469858 PGAP2Q9UHJ9 254 aa20.8■□□□□ 0.92
SMC4-211ENST00000469858 SLC16A2P36021 539 aa20.79■□□□□ 0.92
SMC4-211ENST00000469858 SLC1A4P43007 532 aa20.79■□□□□ 0.92
SMC4-211ENST00000469858 CCDC12Q8WUD4 166 aaPredicted RBP20.79■□□□□ 0.92
SMC4-211ENST00000469858 DCAF4Q8WV16 495 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms