RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 A0A0D9SFI3 127 aa20.8■□□□□ 0.92
MRPL28-208ENST00000469744 MORN1Q5T089 497 aa20.8■□□□□ 0.92
MRPL28-208ENST00000469744 PRPF38BQ5VTL8 546 aaKnown RBP20.8■□□□□ 0.92
MRPL28-208ENST00000469744 RILPL2Q969X0 211 aa20.8■□□□□ 0.92
MRPL28-208ENST00000469744 ATG4CQ96DT6 458 aa20.8■□□□□ 0.92
MRPL28-208ENST00000469744 HOXC10Q9NYD6 342 aa20.8■□□□□ 0.92
MRPL28-208ENST00000469744 CEP290O15078 2479 aa20.8■□□□□ 0.92
MRPL28-208ENST00000469744 WDR46O15213 610 aaKnown RBP20.79■□□□□ 0.92
MRPL28-208ENST00000469744 PPARAQ07869 468 aa20.79■□□□□ 0.92
MRPL28-208ENST00000469744 CCL14Q16627 93 aa20.79■□□□□ 0.92
MRPL28-208ENST00000469744 NKX2-3Q8TAU0 364 aa20.79■□□□□ 0.92
MRPL28-208ENST00000469744 USP6NLQ92738 828 aa20.79■□□□□ 0.92
MRPL28-208ENST00000469744 IL17RAQ96F46 866 aa20.79■□□□□ 0.92
MRPL28-208ENST00000469744 GOPCQ9HD26 462 aa20.79■□□□□ 0.92
MRPL28-208ENST00000469744 FBXO28Q9NVF7 368 aa20.79■□□□□ 0.92
MRPL28-208ENST00000469744 CIZ1Q9ULV3 898 aaPredicted RBP20.79■□□□□ 0.92
MRPL28-208ENST00000469744 DSG3P32926 999 aa20.78■□□□□ 0.92
MRPL28-208ENST00000469744 FAM83BQ5T0W9 1011 aa20.78■□□□□ 0.92
MRPL28-208ENST00000469744 ZNF444Q8N0Y2 327 aaPredicted RBP20.78■□□□□ 0.92
MRPL28-208ENST00000469744 NUP88Q99567 741 aaPredicted RBP20.78■□□□□ 0.92
MRPL28-208ENST00000469744 MOV10L1Q9BXT6 1211 aaKnown RBP20.78■□□□□ 0.92
MRPL28-208ENST00000469744 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.78■□□□□ 0.92
MRPL28-208ENST00000469744 SLKQ9H2G2 1235 aaPredicted RBP20.78■□□□□ 0.92
MRPL28-208ENST00000469744 PAK6Q9NQU5 681 aaPredicted RBP20.78■□□□□ 0.92
MRPL28-208ENST00000469744 K7ELQ4 463 aaPredicted RBP20.77■□□□□ 0.92
MRPL28-208ENST00000469744 SGPL1O95470 568 aa20.77■□□□□ 0.92
MRPL28-208ENST00000469744 RGS2P41220 211 aa20.77■□□□□ 0.92
MRPL28-208ENST00000469744 CTDSPL2Q05D32 466 aa20.77■□□□□ 0.92
MRPL28-208ENST00000469744 NMIQ13287 307 aaPredicted RBP20.77■□□□□ 0.92
MRPL28-208ENST00000469744 PLS1Q14651 629 aa20.77■□□□□ 0.92
MRPL28-208ENST00000469744 FAM47AQ5JRC9 791 aa20.77■□□□□ 0.92
MRPL28-208ENST00000469744 SPATC1LQ9H0A9 340 aa20.77■□□□□ 0.92
MRPL28-208ENST00000469744 INCENPQ9NQS7 918 aa20.77■□□□□ 0.92
MRPL28-208ENST00000469744 IGKV6D-41A0A0C4DH26 115 aa20.76■□□□□ 0.91
MRPL28-208ENST00000469744 XRCC5P13010 732 aaKnown RBP20.76■□□□□ 0.91
MRPL28-208ENST00000469744 ZKSCAN1P17029 563 aaPredicted RBP20.76■□□□□ 0.91
MRPL28-208ENST00000469744 DDIT3P35638 169 aa20.76■□□□□ 0.91
MRPL28-208ENST00000469744 ANAPC15P60006 121 aa20.76■□□□□ 0.91
MRPL28-208ENST00000469744 MAP2K5Q13163 448 aa20.76■□□□□ 0.91
MRPL28-208ENST00000469744 ZNF589Q86UQ0 364 aaPredicted RBP20.76■□□□□ 0.91
MRPL28-208ENST00000469744 CEP95Q96GE4 821 aa20.76■□□□□ 0.91
MRPL28-208ENST00000469744 APBA2Q99767 749 aa20.76■□□□□ 0.91
MRPL28-208ENST00000469744 ZNF287Q9HBT7 754 aa20.76■□□□□ 0.91
MRPL28-208ENST00000469744 HELLSQ9NRZ9 838 aa20.76■□□□□ 0.91
MRPL28-208ENST00000469744 NYAP2Q9P242 653 aa20.76■□□□□ 0.91
MRPL28-208ENST00000469744 CLIP2Q9UDT6 1046 aa20.76■□□□□ 0.91
MRPL28-208ENST00000469744 IVNS1ABPQ9Y6Y0 642 aa20.76■□□□□ 0.91
MRPL28-208ENST00000469744 TFRCP02786 760 aaKnown RBP20.75■□□□□ 0.91
MRPL28-208ENST00000469744 PRKAR2AP13861 404 aaKnown RBP20.75■□□□□ 0.91
MRPL28-208ENST00000469744 PTPREP23469 700 aa20.75■□□□□ 0.91
MRPL28-208ENST00000469744 MCCP23508 829 aa20.75■□□□□ 0.91
MRPL28-208ENST00000469744 PDE4BQ07343 736 aa20.75■□□□□ 0.91
MRPL28-208ENST00000469744 SLC15A5A6NIM6 579 aa20.75■□□□□ 0.91
MRPL28-208ENST00000469744 FARP2O94887 1054 aaPredicted RBP20.75■□□□□ 0.91
MRPL28-208ENST00000469744 NDUFB10O96000 172 aa20.75■□□□□ 0.91
MRPL28-208ENST00000469744 SLC3A2P08195 630 aaKnown RBP20.75■□□□□ 0.91
MRPL28-208ENST00000469744 TSPY3P0CV98 308 aa20.75■□□□□ 0.91
MRPL28-208ENST00000469744 TSPY8P0CW00 308 aa20.75■□□□□ 0.91
MRPL28-208ENST00000469744 MCMDC2Q4G0Z9 681 aa20.75■□□□□ 0.91
MRPL28-208ENST00000469744 LRRC47Q8N1G4 583 aaKnown RBP20.75■□□□□ 0.91
MRPL28-208ENST00000469744 HMX1Q9NP08 348 aaPredicted RBP20.75■□□□□ 0.91
MRPL28-208ENST00000469744 TACC3Q9Y6A5 838 aa20.75■□□□□ 0.91
MRPL28-208ENST00000469744 RPTORQ8N122 1335 aa20.74■□□□□ 0.91
MRPL28-208ENST00000469744 F5H6K3 240 aa20.74■□□□□ 0.91
MRPL28-208ENST00000469744 ERCC3P19447 782 aa20.74■□□□□ 0.91
MRPL28-208ENST00000469744 TFAP4Q01664 338 aa20.74■□□□□ 0.91
MRPL28-208ENST00000469744 KLRC3Q07444 240 aa20.74■□□□□ 0.91
MRPL28-208ENST00000469744 GRB14Q14449 540 aa20.74■□□□□ 0.91
MRPL28-208ENST00000469744 TMEM132BQ14DG7 1078 aa20.74■□□□□ 0.91
MRPL28-208ENST00000469744 UBE2Q1Q7Z7E8 422 aa20.74■□□□□ 0.91
MRPL28-208ENST00000469744 MB21D1Q8N884 522 aa20.74■□□□□ 0.91
MRPL28-208ENST00000469744 MTMR4Q9NYA4 1195 aa20.74■□□□□ 0.91
MRPL28-208ENST00000469744 FLRT1Q9NZU1 646 aa20.74■□□□□ 0.91
MRPL28-208ENST00000469744 CACNB2Q08289 660 aaPredicted RBP20.73■□□□□ 0.91
MRPL28-208ENST00000469744 MAP3K21Q5TCX8 1036 aa20.73■□□□□ 0.91
MRPL28-208ENST00000469744 NCAPG2Q86XI2 1143 aa20.73■□□□□ 0.91
MRPL28-208ENST00000469744 NEDD1Q8NHV4 660 aa20.73■□□□□ 0.91
MRPL28-208ENST00000469744 NPLOC4Q8TAT6 608 aa20.73■□□□□ 0.91
MRPL28-208ENST00000469744 CHMP4CQ96CF2 233 aa20.73■□□□□ 0.91
MRPL28-208ENST00000469744 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.73■□□□□ 0.91
MRPL28-208ENST00000469744 PLIN4Q96Q06 1357 aa20.73■□□□□ 0.91
MRPL28-208ENST00000469744 ZNF236Q9UL36 1845 aa20.73■□□□□ 0.91
MRPL28-208ENST00000469744 ST18O60284 1047 aa20.72■□□□□ 0.91
MRPL28-208ENST00000469744 CRISPLD2Q9H0B8 497 aa20.72■□□□□ 0.91
MRPL28-208ENST00000469744 PPP1R9AQ9ULJ8 1098 aa20.72■□□□□ 0.91
MRPL28-208ENST00000469744 CCDC171Q6TFL3 1326 aa20.71■□□□□ 0.91
MRPL28-208ENST00000469744 VWA5AO00534 786 aa20.71■□□□□ 0.91
MRPL28-208ENST00000469744 TTLL1O95922 423 aa20.71■□□□□ 0.91
MRPL28-208ENST00000469744 HSPD1P10809 573 aaKnown RBP20.71■□□□□ 0.91
MRPL28-208ENST00000469744 ADORA2AP29274 412 aa20.71■□□□□ 0.91
MRPL28-208ENST00000469744 CCND3P30281 292 aaPredicted RBP20.71■□□□□ 0.91
MRPL28-208ENST00000469744 TRMT44Q8IYL2 757 aaKnown RBP20.71■□□□□ 0.91
MRPL28-208ENST00000469744 SHCBP1Q8NEM2 672 aa20.71■□□□□ 0.91
MRPL28-208ENST00000469744 DIS3LQ8TF46 1054 aaKnown RBP20.71■□□□□ 0.91
MRPL28-208ENST00000469744 ADAMTS5Q9UNA0 930 aa20.71■□□□□ 0.91
MRPL28-208ENST00000469744 ZNFX1Q9P2E3 1918 aaKnown RBP20.71■□□□□ 0.91
MRPL28-208ENST00000469744 NMT2O60551 498 aa20.7■□□□□ 0.9
MRPL28-208ENST00000469744 FGAP02671 866 aa20.7■□□□□ 0.9
MRPL28-208ENST00000469744 ALX1Q15699 326 aa20.7■□□□□ 0.9
MRPL28-208ENST00000469744 SLF1Q9BQI6 1058 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms