RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 RC3H1Q5TC82 1133 aaKnown RBP10.73□□□□□ -0.69
TOP3A-203ENST00000469739 ZNF804AQ7Z570 1209 aa10.73□□□□□ -0.69
TOP3A-203ENST00000469739 PHF20Q9BVI0 1012 aa10.73□□□□□ -0.69
TOP3A-203ENST00000469739 BRMS1Q9HCU9 246 aa10.73□□□□□ -0.69
TOP3A-203ENST00000469739 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.73□□□□□ -0.69
TOP3A-203ENST00000469739 ATP8A2Q9NTI2 1148 aa10.73□□□□□ -0.69
TOP3A-203ENST00000469739 TNRC6CQ9HCJ0 1690 aaKnown RBP10.73□□□□□ -0.69
TOP3A-203ENST00000469739 XDHP47989 1333 aa10.73□□□□□ -0.69
TOP3A-203ENST00000469739 RBM6P78332 1123 aaKnown RBP10.73□□□□□ -0.69
TOP3A-203ENST00000469739 DDR1Q08345 913 aa10.73□□□□□ -0.69
TOP3A-203ENST00000469739 INF2Q27J81 1249 aa10.73□□□□□ -0.69
TOP3A-203ENST00000469739 C12orf60Q5U649 245 aa10.73□□□□□ -0.69
TOP3A-203ENST00000469739 SARM1Q6SZW1 724 aa10.73□□□□□ -0.69
TOP3A-203ENST00000469739 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.73□□□□□ -0.69
TOP3A-203ENST00000469739 LRRC47Q8N1G4 583 aaKnown RBP10.73□□□□□ -0.69
TOP3A-203ENST00000469739 KCNQ5Q9NR82 932 aa10.73□□□□□ -0.69
TOP3A-203ENST00000469739 GGA1Q9UJY5 639 aa10.73□□□□□ -0.69
TOP3A-203ENST00000469739 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.73□□□□□ -0.69
TOP3A-203ENST00000469739 TIAM2Q8IVF5 1701 aa10.72□□□□□ -0.69
TOP3A-203ENST00000469739 SMTNL1A8MU46 457 aa10.72□□□□□ -0.69
TOP3A-203ENST00000469739 G3V3G9 751 aa10.72□□□□□ -0.69
TOP3A-203ENST00000469739 PES1O00541 588 aaKnown RBP10.72□□□□□ -0.69
TOP3A-203ENST00000469739 PRPF3O43395 683 aaKnown RBP10.72□□□□□ -0.69
TOP3A-203ENST00000469739 PTPN14Q15678 1187 aa10.72□□□□□ -0.69
TOP3A-203ENST00000469739 DCAF8Q5TAQ9 597 aa10.72□□□□□ -0.69
TOP3A-203ENST00000469739 ARPP21Q9UBL0 812 aaPredicted RBP10.72□□□□□ -0.69
TOP3A-203ENST00000469739 PCDHAC2Q9Y5I4 1007 aa10.72□□□□□ -0.69
TOP3A-203ENST00000469739 BAG3O95817 575 aa10.72□□□□□ -0.69
TOP3A-203ENST00000469739 ERCC3P19447 782 aa10.72□□□□□ -0.69
TOP3A-203ENST00000469739 ST5P78524 1137 aa10.72□□□□□ -0.69
TOP3A-203ENST00000469739 KARSQ15046 597 aaKnown RBP10.72□□□□□ -0.69
TOP3A-203ENST00000469739 NPY5RQ15761 445 aa10.72□□□□□ -0.69
TOP3A-203ENST00000469739 CEP135Q66GS9 1140 aa10.72□□□□□ -0.69
TOP3A-203ENST00000469739 GPIHBP1Q8IV16 184 aa10.72□□□□□ -0.69
TOP3A-203ENST00000469739 WDR66Q8TBY9 1149 aa10.72□□□□□ -0.69
TOP3A-203ENST00000469739 SRPRBQ9Y5M8 271 aaKnown RBP10.72□□□□□ -0.69
TOP3A-203ENST00000469739 PCNTO95613 3336 aa10.72□□□□□ -0.69
TOP3A-203ENST00000469739 CACNA1SQ13698 1873 aa10.72□□□□□ -0.69
TOP3A-203ENST00000469739 TCP10Q12799 353 aa10.71□□□□□ -0.69
TOP3A-203ENST00000469739 SLC35G1Q2M3R5 365 aa10.71□□□□□ -0.69
TOP3A-203ENST00000469739 SPTY2D1Q68D10 685 aaPredicted RBP10.71□□□□□ -0.69
TOP3A-203ENST00000469739 AMOTL1Q8IY63 956 aa10.71□□□□□ -0.69
TOP3A-203ENST00000469739 ZNF622Q969S3 477 aaKnown RBP eCLIP10.71□□□□□ -0.69
TOP3A-203ENST00000469739 TMEM47Q9BQJ4 181 aa10.71□□□□□ -0.69
TOP3A-203ENST00000469739 TUBE1Q9UJT0 475 aa10.71□□□□□ -0.69
TOP3A-203ENST00000469739 CYTH3O43739 400 aa10.71□□□□□ -0.69
TOP3A-203ENST00000469739 TOP1P11387 765 aaKnown RBP10.71□□□□□ -0.69
TOP3A-203ENST00000469739 CD44P16070 742 aaKnown RBP10.71□□□□□ -0.69
TOP3A-203ENST00000469739 MED15Q96RN5 788 aa10.71□□□□□ -0.69
TOP3A-203ENST00000469739 EYA3Q99504 573 aa10.71□□□□□ -0.69
TOP3A-203ENST00000469739 MPHOSPH10O00566 681 aaKnown RBP10.71□□□□□ -0.7
TOP3A-203ENST00000469739 CCT6AP40227 531 aaKnown RBP10.71□□□□□ -0.7
TOP3A-203ENST00000469739 IL17AQ16552 155 aa10.71□□□□□ -0.7
TOP3A-203ENST00000469739 SYT10Q6XYQ8 523 aa10.71□□□□□ -0.7
TOP3A-203ENST00000469739 ECM29Q5VYK3 1845 aa10.71□□□□□ -0.7
TOP3A-203ENST00000469739 KLRF2D3W0D1 207 aa10.7□□□□□ -0.7
TOP3A-203ENST00000469739 SEMA3EO15041 775 aa10.7□□□□□ -0.7
TOP3A-203ENST00000469739 ACTN4O43707 911 aaKnown RBP10.7□□□□□ -0.7
TOP3A-203ENST00000469739 MDM2Q00987 491 aaPredicted RBP10.7□□□□□ -0.7
TOP3A-203ENST00000469739 NCBP1Q09161 790 aaKnown RBP10.7□□□□□ -0.7
TOP3A-203ENST00000469739 TERF2Q15554 542 aa10.7□□□□□ -0.7
TOP3A-203ENST00000469739 SHROOM1Q2M3G4 852 aaPredicted RBP10.7□□□□□ -0.7
TOP3A-203ENST00000469739 JAKMIP3Q5VZ66 844 aa10.7□□□□□ -0.7
TOP3A-203ENST00000469739 CCDC112Q8NEF3 446 aa10.7□□□□□ -0.7
TOP3A-203ENST00000469739 TBC1D16Q8TBP0 767 aa10.7□□□□□ -0.7
TOP3A-203ENST00000469739 DESI2Q9BSY9 194 aa10.7□□□□□ -0.7
TOP3A-203ENST00000469739 DBNDD1Q9H9R9 158 aa10.7□□□□□ -0.7
TOP3A-203ENST00000469739 GPCPD1Q9NPB8 672 aa10.7□□□□□ -0.7
TOP3A-203ENST00000469739 RBM28Q9NW13 759 aaKnown RBP10.7□□□□□ -0.7
TOP3A-203ENST00000469739 DDX41Q9UJV9 622 aaKnown RBP10.7□□□□□ -0.7
TOP3A-203ENST00000469739 CEP131Q9UPN4 1083 aa10.7□□□□□ -0.7
TOP3A-203ENST00000469739 CCDC194A0A1B0GVG4 234 aa10.7□□□□□ -0.7
TOP3A-203ENST00000469739 TEX33O43247 280 aa10.7□□□□□ -0.7
TOP3A-203ENST00000469739 CDK8P49336 464 aa10.7□□□□□ -0.7
TOP3A-203ENST00000469739 RBM5P52756 815 aaKnown RBP eCLIP10.7□□□□□ -0.7
TOP3A-203ENST00000469739 LETM2Q2VYF4 491 aa10.7□□□□□ -0.7
TOP3A-203ENST00000469739 GJA10Q969M2 543 aa10.7□□□□□ -0.7
TOP3A-203ENST00000469739 CEP95Q96GE4 821 aa10.7□□□□□ -0.7
TOP3A-203ENST00000469739 PAGE5Q96GU1 130 aa10.7□□□□□ -0.7
TOP3A-203ENST00000469739 TMEM60Q9H2L4 133 aa10.7□□□□□ -0.7
TOP3A-203ENST00000469739 UBR3Q6ZT12 1888 aa10.7□□□□□ -0.7
TOP3A-203ENST00000469739 MYH6P13533 1939 aa10.7□□□□□ -0.7
TOP3A-203ENST00000469739 RASA1P20936 1047 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 IRX3P78415 501 aaPredicted RBP10.69□□□□□ -0.7
TOP3A-203ENST00000469739 CUL4BQ13620 913 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 E4F1Q66K89 784 aaPredicted RBP10.69□□□□□ -0.7
TOP3A-203ENST00000469739 WWC2Q6AWC2 1192 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 INTS13Q9NVM9 706 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 BIN2Q9UBW5 565 aaPredicted RBP10.69□□□□□ -0.7
TOP3A-203ENST00000469739 HOOK1Q9UJC3 728 aaKnown RBP10.69□□□□□ -0.7
TOP3A-203ENST00000469739 LEMD3Q9Y2U8 911 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 ORC4O43929 436 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 DDAH1O94760 285 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 CALM1P0DP23 149 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 CALM2P0DP24 149 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 CALM3P0DP25 149 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 KIF5BP33176 963 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 SLC16A2P36021 539 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 BLIDQ8IZY5 108 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 CCAR2Q8N163 923 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms