RNA–Protein interactions for RNA: ENST00000469608.5

CALCA-204, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-204ENST00000469608 DPP9Q86TI2 863 aa16.92■□□□□ 0.3
CALCA-204ENST00000469608 SHCBP1Q8NEM2 672 aa16.92■□□□□ 0.3
CALCA-204ENST00000469608 NUP88Q99567 741 aaPredicted RBP16.92■□□□□ 0.3
CALCA-204ENST00000469608 NBPF3Q9H094 633 aa16.92■□□□□ 0.3
CALCA-204ENST00000469608 NAPBQ9H115 298 aa16.92■□□□□ 0.3
CALCA-204ENST00000469608 OGDHLQ9ULD0 1010 aa16.92■□□□□ 0.3
CALCA-204ENST00000469608 PLXNA1Q9UIW2 1896 aa16.91■□□□□ 0.3
CALCA-204ENST00000469608 HOXC6P09630 235 aa16.91■□□□□ 0.3
CALCA-204ENST00000469608 CYP2C19P33261 490 aa16.91■□□□□ 0.3
CALCA-204ENST00000469608 TMEM132BQ14DG7 1078 aa16.91■□□□□ 0.3
CALCA-204ENST00000469608 ZNF444Q8N0Y2 327 aaPredicted RBP16.91■□□□□ 0.3
CALCA-204ENST00000469608 C11orf49Q9H6J7 331 aa16.91■□□□□ 0.3
CALCA-204ENST00000469608 ZNF287Q9HBT7 754 aa16.91■□□□□ 0.3
CALCA-204ENST00000469608 NDUFB10O96000 172 aa16.9■□□□□ 0.3
CALCA-204ENST00000469608 CNGA1P29973 690 aa16.9■□□□□ 0.3
CALCA-204ENST00000469608 MNX1P50219 401 aaPredicted RBP16.9■□□□□ 0.3
CALCA-204ENST00000469608 PDE1AP54750 535 aa16.9■□□□□ 0.3
CALCA-204ENST00000469608 C7orf61Q8IZ16 206 aa16.9■□□□□ 0.3
CALCA-204ENST00000469608 LNPKQ9C0E8 428 aa16.9■□□□□ 0.3
CALCA-204ENST00000469608 MROH8Q9H579 483 aa16.9■□□□□ 0.3
CALCA-204ENST00000469608 NYAP2Q9P242 653 aa16.9■□□□□ 0.3
CALCA-204ENST00000469608 CLIP2Q9UDT6 1046 aa16.9■□□□□ 0.3
CALCA-204ENST00000469608 PPP1R9AQ9ULJ8 1098 aa16.9■□□□□ 0.3
CALCA-204ENST00000469608 STRNO43815 780 aa16.89■□□□□ 0.29
CALCA-204ENST00000469608 PPARAQ07869 468 aa16.89■□□□□ 0.29
CALCA-204ENST00000469608 LHX8Q68G74 356 aa16.89■□□□□ 0.29
CALCA-204ENST00000469608 LRRC47Q8N1G4 583 aaKnown RBP16.89■□□□□ 0.29
CALCA-204ENST00000469608 EVI5LQ96CN4 794 aa16.89■□□□□ 0.29
CALCA-204ENST00000469608 CEP95Q96GE4 821 aa16.89■□□□□ 0.29
CALCA-204ENST00000469608 STAP2Q9UGK3 403 aa16.89■□□□□ 0.29
CALCA-204ENST00000469608 IGKV6D-41A0A0C4DH26 115 aa16.88■□□□□ 0.29
CALCA-204ENST00000469608 F5H6K3 240 aa16.88■□□□□ 0.29
CALCA-204ENST00000469608 VWA5AO00534 786 aa16.88■□□□□ 0.29
CALCA-204ENST00000469608 COBLO75128 1261 aa16.88■□□□□ 0.29
CALCA-204ENST00000469608 SLC3A2P08195 630 aaKnown RBP16.88■□□□□ 0.29
CALCA-204ENST00000469608 TSPY3P0CV98 308 aa16.88■□□□□ 0.29
CALCA-204ENST00000469608 TSPY8P0CW00 308 aa16.88■□□□□ 0.29
CALCA-204ENST00000469608 PDE4BQ07343 736 aa16.88■□□□□ 0.29
CALCA-204ENST00000469608 KLRC3Q07444 240 aa16.88■□□□□ 0.29
CALCA-204ENST00000469608 FAM47AQ5JRC9 791 aa16.88■□□□□ 0.29
CALCA-204ENST00000469608 B4GALNT3Q6L9W6 998 aa16.88■□□□□ 0.29
CALCA-204ENST00000469608 TRPV1Q8NER1 839 aa16.88■□□□□ 0.29
CALCA-204ENST00000469608 SLF1Q9BQI6 1058 aa16.88■□□□□ 0.29
CALCA-204ENST00000469608 RBM27Q9P2N5 1060 aaKnown RBP16.88■□□□□ 0.29
CALCA-204ENST00000469608 PFASO15067 1338 aa16.88■□□□□ 0.29
CALCA-204ENST00000469608 PLIN4Q96Q06 1357 aa16.88■□□□□ 0.29
CALCA-204ENST00000469608 FOXP2O15409 715 aa16.87■□□□□ 0.29
CALCA-204ENST00000469608 SLC25A27O95847 323 aa16.87■□□□□ 0.29
CALCA-204ENST00000469608 FCER1AP12319 257 aa16.87■□□□□ 0.29
CALCA-204ENST00000469608 FXR1P51114 621 aaKnown RBP eCLIP16.87■□□□□ 0.29
CALCA-204ENST00000469608 VPS53Q5VIR6 699 aa16.87■□□□□ 0.29
CALCA-204ENST00000469608 OLFML2BQ68BL8 750 aa16.87■□□□□ 0.29
CALCA-204ENST00000469608 MMP19Q99542 508 aa16.87■□□□□ 0.29
CALCA-204ENST00000469608 SLC5A4Q9NY91 659 aa16.87■□□□□ 0.29
CALCA-204ENST00000469608 MTMR4Q9NYA4 1195 aa16.87■□□□□ 0.29
CALCA-204ENST00000469608 DDX20Q9UHI6 824 aaKnown RBP16.87■□□□□ 0.29
CALCA-204ENST00000469608 ISY1Q9ULR0 285 aaKnown RBP16.87■□□□□ 0.29
CALCA-204ENST00000469608 ZMYND8Q9ULU4 1186 aaPredicted RBP16.87■□□□□ 0.29
CALCA-204ENST00000469608 ADAMTS5Q9UNA0 930 aa16.87■□□□□ 0.29
CALCA-204ENST00000469608 TTLL1O95922 423 aa16.86■□□□□ 0.29
CALCA-204ENST00000469608 CYBAP13498 195 aa16.86■□□□□ 0.29
CALCA-204ENST00000469608 STAT3P40763 770 aa16.86■□□□□ 0.29
CALCA-204ENST00000469608 TFAP4Q01664 338 aa16.86■□□□□ 0.29
CALCA-204ENST00000469608 CTDSPL2Q05D32 466 aa16.86■□□□□ 0.29
CALCA-204ENST00000469608 RIOX2Q8IUF8 465 aa16.86■□□□□ 0.29
CALCA-204ENST00000469608 ABRAQ8N0Z2 381 aa16.86■□□□□ 0.29
CALCA-204ENST00000469608 REPS2Q8NFH8 660 aa16.86■□□□□ 0.29
CALCA-204ENST00000469608 EXOC6Q8TAG9 804 aa16.86■□□□□ 0.29
CALCA-204ENST00000469608 FAM227BQ96M60 508 aa16.86■□□□□ 0.29
CALCA-204ENST00000469608 RWDD1Q9H446 243 aaPredicted RBP16.86■□□□□ 0.29
CALCA-204ENST00000469608 ZNF214Q9UL59 606 aaPredicted RBP16.86■□□□□ 0.29
CALCA-204ENST00000469608 A0A0D9SFI3 127 aa16.85■□□□□ 0.29
CALCA-204ENST00000469608 TRIM6-TRIM34B2RNG4 842 aa16.85■□□□□ 0.29
CALCA-204ENST00000469608 PGK2P07205 417 aa16.85■□□□□ 0.29
CALCA-204ENST00000469608 SLC4A3P48751 1232 aa16.85■□□□□ 0.29
CALCA-204ENST00000469608 AAMPQ13685 434 aa16.85■□□□□ 0.29
CALCA-204ENST00000469608 KCTD2Q14681 263 aa16.85■□□□□ 0.29
CALCA-204ENST00000469608 ANO1Q5XXA6 986 aa16.85■□□□□ 0.29
CALCA-204ENST00000469608 NEDD1Q8NHV4 660 aa16.85■□□□□ 0.29
CALCA-204ENST00000469608 KIFC2Q96AC6 838 aa16.85■□□□□ 0.29
CALCA-204ENST00000469608 CHMP4CQ96CF2 233 aa16.85■□□□□ 0.29
CALCA-204ENST00000469608 MAML3Q96JK9 1138 aa16.85■□□□□ 0.29
CALCA-204ENST00000469608 SMCHD1A6NHR9 2005 aa16.84■□□□□ 0.29
CALCA-204ENST00000469608 DNAH12Q6ZR08 3092 aa16.84■□□□□ 0.29
CALCA-204ENST00000469608 MSCO60682 206 aa16.84■□□□□ 0.29
CALCA-204ENST00000469608 IGHA2P01877 340 aa16.84■□□□□ 0.29
CALCA-204ENST00000469608 COL6A1P12109 1028 aa16.84■□□□□ 0.29
CALCA-204ENST00000469608 SYN1P17600 705 aa16.84■□□□□ 0.29
CALCA-204ENST00000469608 PRAMEF19Q5SWL8 479 aa16.84■□□□□ 0.29
CALCA-204ENST00000469608 SNRNP48Q6IEG0 339 aaKnown RBP16.84■□□□□ 0.29
CALCA-204ENST00000469608 SMC5Q8IY18 1101 aa16.84■□□□□ 0.29
CALCA-204ENST00000469608 TEX13BQ9BXU2 312 aa16.84■□□□□ 0.29
CALCA-204ENST00000469608 INCENPQ9NQS7 918 aa16.84■□□□□ 0.29
CALCA-204ENST00000469608 HELLSQ9NRZ9 838 aa16.84■□□□□ 0.29
CALCA-204ENST00000469608 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.84■□□□□ 0.29
CALCA-204ENST00000469608 CTDP1Q9Y5B0 961 aaPredicted RBP16.84■□□□□ 0.29
CALCA-204ENST00000469608 TSPY2A6NKD2 308 aa16.83■□□□□ 0.28
CALCA-204ENST00000469608 MCM3APO60318 1980 aa16.83■□□□□ 0.28
CALCA-204ENST00000469608 IGHDP01880 384 aa16.83■□□□□ 0.28
CALCA-204ENST00000469608 MYCNP04198 464 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms