RNA–Protein interactions for RNA: ENST00000469403.1

AGRN-205, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 899 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-205ENST00000469403 APOBRQ0VD83 1088 aa30.92■■■□□ 2.54
AGRN-205ENST00000469403 PABPC4Q13310 644 aaKnown RBP eCLIP30.92■■■□□ 2.54
AGRN-205ENST00000469403 TREML2Q5T2D2 321 aa30.92■■■□□ 2.54
AGRN-205ENST00000469403 USP17L15C9J2P7 530 aa30.91■■■□□ 2.54
AGRN-205ENST00000469403 BTBD19C9JJ37 291 aa30.91■■■□□ 2.54
AGRN-205ENST00000469403 USP17L13C9JLJ4 530 aa30.91■■■□□ 2.54
AGRN-205ENST00000469403 USP17L11C9JVI0 530 aa30.91■■■□□ 2.54
AGRN-205ENST00000469403 USP17L18D6R9N7 530 aa30.91■■■□□ 2.54
AGRN-205ENST00000469403 USP17L22D6RA61 530 aa30.91■■■□□ 2.54
AGRN-205ENST00000469403 USP17L17D6RBQ6 530 aa30.91■■■□□ 2.54
AGRN-205ENST00000469403 USP17L19D6RCP7 530 aa30.91■■■□□ 2.54
AGRN-205ENST00000469403 USP17L20D6RJB6 530 aa30.91■■■□□ 2.54
AGRN-205ENST00000469403 BMP3P12645 472 aa30.91■■■□□ 2.54
AGRN-205ENST00000469403 ZNF543Q08ER8 600 aa30.91■■■□□ 2.54
AGRN-205ENST00000469403 USP17L24Q0WX57 530 aa30.91■■■□□ 2.54
AGRN-205ENST00000469403 GRM4Q14833 912 aa30.91■■■□□ 2.54
AGRN-205ENST00000469403 GPATCH4Q5T3I0 446 aaKnown RBP30.91■■■□□ 2.54
AGRN-205ENST00000469403 SYNE3Q6ZMZ3 975 aa30.91■■■□□ 2.54
AGRN-205ENST00000469403 ZNF274Q96GC6 653 aaPredicted RBP30.91■■■□□ 2.54
AGRN-205ENST00000469403 RPAP3Q9H6T3 665 aaPredicted RBP30.91■■■□□ 2.54
AGRN-205ENST00000469403 NID2Q14112 1375 aa30.91■■■□□ 2.54
AGRN-205ENST00000469403 RAD21O60216 631 aa30.9■■■□□ 2.54
AGRN-205ENST00000469403 PLA2G6O60733 806 aa30.9■■■□□ 2.54
AGRN-205ENST00000469403 ASPRV1Q53RT3 343 aa30.9■■■□□ 2.54
AGRN-205ENST00000469403 FAM83BQ5T0W9 1011 aa30.9■■■□□ 2.54
AGRN-205ENST00000469403 CATSPERGQ6ZRH7 1159 aa30.9■■■□□ 2.54
AGRN-205ENST00000469403 IFNL1Q8IU54 200 aa30.9■■■□□ 2.54
AGRN-205ENST00000469403 ZBTB43O43298 467 aa30.89■■■□□ 2.54
AGRN-205ENST00000469403 ST18O60284 1047 aa30.89■■■□□ 2.54
AGRN-205ENST00000469403 FAM43AQ8N2R8 423 aa30.89■■■□□ 2.54
AGRN-205ENST00000469403 DNAJC5GQ8N7S2 189 aa30.89■■■□□ 2.54
AGRN-205ENST00000469403 NUP88Q99567 741 aaPredicted RBP30.89■■■□□ 2.54
AGRN-205ENST00000469403 PARP14Q460N5 1801 aa30.89■■■□□ 2.53
AGRN-205ENST00000469403 PALM3A6NDB9 673 aaPredicted RBP30.88■■■□□ 2.53
AGRN-205ENST00000469403 IGF2BP3O00425 579 aaKnown RBP eCLIP30.88■■■□□ 2.53
AGRN-205ENST00000469403 PARP1P09874 1014 aaKnown RBP30.88■■■□□ 2.53
AGRN-205ENST00000469403 PPP2R5BQ15173 497 aa30.88■■■□□ 2.53
AGRN-205ENST00000469403 OTUD7BQ6GQQ9 843 aa30.88■■■□□ 2.53
AGRN-205ENST00000469403 RASGRP2Q7LDG7 609 aa30.88■■■□□ 2.53
AGRN-205ENST00000469403 MYL10Q9BUA6 226 aa30.88■■■□□ 2.53
AGRN-205ENST00000469403 RLFQ13129 1914 aa30.88■■■□□ 2.53
AGRN-205ENST00000469403 PDIA3P30101 505 aaKnown RBP30.87■■■□□ 2.53
AGRN-205ENST00000469403 CCDC96Q2M329 555 aa30.87■■■□□ 2.53
AGRN-205ENST00000469403 BTNL9Q6UXG8 535 aa30.87■■■□□ 2.53
AGRN-205ENST00000469403 FANCBQ8NB91 859 aa30.87■■■□□ 2.53
AGRN-205ENST00000469403 MAD2L2Q9UI95 211 aa30.87■■■□□ 2.53
AGRN-205ENST00000469403 FEM1BQ9UK73 627 aa30.87■■■□□ 2.53
AGRN-205ENST00000469403 HPS5Q9UPZ3 1129 aa30.87■■■□□ 2.53
AGRN-205ENST00000469403 MTMR7Q9Y216 660 aa30.87■■■□□ 2.53
AGRN-205ENST00000469403 MYPNQ86TC9 1320 aa30.87■■■□□ 2.53
AGRN-205ENST00000469403 GOLGA8BA8MQT2 603 aa30.86■■■□□ 2.53
AGRN-205ENST00000469403 PDHXO00330 501 aa30.86■■■□□ 2.53
AGRN-205ENST00000469403 KIF5BP33176 963 aa30.86■■■□□ 2.53
AGRN-205ENST00000469403 CTCFLQ8NI51 663 aaPredicted RBP30.86■■■□□ 2.53
AGRN-205ENST00000469403 NUP133Q8WUM0 1156 aa30.86■■■□□ 2.53
AGRN-205ENST00000469403 TANGO6Q9C0B7 1094 aa30.86■■■□□ 2.53
AGRN-205ENST00000469403 PNMA3Q9UL41 463 aa30.86■■■□□ 2.53
AGRN-205ENST00000469403 TPCN1Q9ULQ1 816 aa30.86■■■□□ 2.53
AGRN-205ENST00000469403 OSBPP22059 807 aa30.85■■■□□ 2.53
AGRN-205ENST00000469403 COG2Q14746 738 aa30.85■■■□□ 2.53
AGRN-205ENST00000469403 KCTD1Q719H9 257 aa30.85■■■□□ 2.53
AGRN-205ENST00000469403 FAM160B2Q86V87 743 aa30.85■■■□□ 2.53
AGRN-205ENST00000469403 MICU3Q86XE3 530 aa30.85■■■□□ 2.53
AGRN-205ENST00000469403 CHURC1Q8WUH1 139 aa30.85■■■□□ 2.53
AGRN-205ENST00000469403 ASCC2Q9H1I8 757 aaPredicted RBP30.85■■■□□ 2.53
AGRN-205ENST00000469403 LIMCH1Q9UPQ0 1083 aa30.85■■■□□ 2.53
AGRN-205ENST00000469403 TMEM232C9JQI7 657 aa30.84■■■□□ 2.53
AGRN-205ENST00000469403 ALDH1A1P00352 501 aa30.84■■■□□ 2.53
AGRN-205ENST00000469403 MCM2P49736 904 aa30.84■■■□□ 2.53
AGRN-205ENST00000469403 STAT2P52630 851 aa30.84■■■□□ 2.53
AGRN-205ENST00000469403 FRMPD2Q68DX3 1309 aaPredicted RBP30.83■■■□□ 2.53
AGRN-205ENST00000469403 SMARCA1P28370 1054 aa30.83■■■□□ 2.53
AGRN-205ENST00000469403 GNAQP50148 359 aa30.83■■■□□ 2.53
AGRN-205ENST00000469403 LBX2Q6XYB7 198 aa30.83■■■□□ 2.53
AGRN-205ENST00000469403 STAG2Q8N3U4 1231 aa30.83■■■□□ 2.53
AGRN-205ENST00000469403 LZTS2Q9BRK4 669 aa30.83■■■□□ 2.53
AGRN-205ENST00000469403 LARP6Q9BRS8 491 aaKnown RBP30.83■■■□□ 2.53
AGRN-205ENST00000469403 GPCPD1Q9NPB8 672 aa30.83■■■□□ 2.53
AGRN-205ENST00000469403 RBM28Q9NW13 759 aaKnown RBP30.83■■■□□ 2.53
AGRN-205ENST00000469403 HOXC10Q9NYD6 342 aa30.83■■■□□ 2.53
AGRN-205ENST00000469403 GOLGA8AA7E2F4 631 aa30.82■■■□□ 2.52
AGRN-205ENST00000469403 KLRF2D3W0D1 207 aa30.82■■■□□ 2.52
AGRN-205ENST00000469403 FLOT1O75955 427 aa30.82■■■□□ 2.52
AGRN-205ENST00000469403 GOLGA8HP0CJ92 632 aa30.82■■■□□ 2.52
AGRN-205ENST00000469403 RXRAP19793 462 aa30.82■■■□□ 2.52
AGRN-205ENST00000469403 METAP2P50579 478 aaKnown RBP eCLIP30.82■■■□□ 2.523e-8■■■■■ 34.2
AGRN-205ENST00000469403 IRX3P78415 501 aaPredicted RBP30.82■■■□□ 2.52
AGRN-205ENST00000469403 RTN1Q16799 776 aa30.82■■■□□ 2.52
AGRN-205ENST00000469403 PRPF38AQ8NAV1 312 aaKnown RBP30.82■■■□□ 2.52
AGRN-205ENST00000469403 SLF1Q9BQI6 1058 aa30.82■■■□□ 2.52
AGRN-205ENST00000469403 FAM217BQ9NTX9 383 aaPredicted RBP30.82■■■□□ 2.52
AGRN-205ENST00000469403 FBXO28Q9NVF7 368 aa30.82■■■□□ 2.52
AGRN-205ENST00000469403 PPP1R9AQ9ULJ8 1098 aa30.82■■■□□ 2.52
AGRN-205ENST00000469403 ADAMTS5Q9UNA0 930 aa30.82■■■□□ 2.52
AGRN-205ENST00000469403 CCDC196A0A1B0GTZ2 297 aa30.81■■■□□ 2.52
AGRN-205ENST00000469403 PFKFB2O60825 505 aa30.81■■■□□ 2.52
AGRN-205ENST00000469403 DSG3P32926 999 aa30.81■■■□□ 2.52
AGRN-205ENST00000469403 TTBK2Q6IQ55 1244 aa30.81■■■□□ 2.52
AGRN-205ENST00000469403 RAB11FIP4Q86YS3 637 aa30.81■■■□□ 2.52
AGRN-205ENST00000469403 CHMP4CQ96CF2 233 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms