RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 PODNQ7Z5L7 613 aa16.78■□□□□ 0.28
LIMS2-213ENST00000469300 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.78■□□□□ 0.28
LIMS2-213ENST00000469300 ANKRD35Q8N283 1001 aa16.78■□□□□ 0.28
LIMS2-213ENST00000469300 GLG1Q92896 1179 aa16.78■□□□□ 0.28
LIMS2-213ENST00000469300 PAGR1Q9BTK6 254 aa16.78■□□□□ 0.28
LIMS2-213ENST00000469300 TRIM6Q9C030 488 aaPredicted RBP16.78■□□□□ 0.28
LIMS2-213ENST00000469300 PCDHB13Q9Y5F0 798 aa16.78■□□□□ 0.28
LIMS2-213ENST00000469300 EEF2P13639 858 aaKnown RBP16.78■□□□□ 0.28
LIMS2-213ENST00000469300 CCDC77Q9BR77 488 aa16.78■□□□□ 0.28
LIMS2-213ENST00000469300 RABGAP1Q9Y3P9 1069 aa16.78■□□□□ 0.28
LIMS2-213ENST00000469300 DDX39AO00148 427 aaKnown RBP16.77■□□□□ 0.28
LIMS2-213ENST00000469300 CA8P35219 290 aa16.77■□□□□ 0.28
LIMS2-213ENST00000469300 TAF12Q16514 161 aa16.77■□□□□ 0.28
LIMS2-213ENST00000469300 IGSF22Q8N9C0 903 aa16.77■□□□□ 0.28
LIMS2-213ENST00000469300 GOLGA5Q8TBA6 731 aa16.77■□□□□ 0.28
LIMS2-213ENST00000469300 MLXIPQ9HAP2 919 aa16.77■□□□□ 0.28
LIMS2-213ENST00000469300 MAGEF1Q9HAY2 307 aa16.77■□□□□ 0.28
LIMS2-213ENST00000469300 EXOC3O60645 756 aa16.77■□□□□ 0.28
LIMS2-213ENST00000469300 HARSP12081 509 aaKnown RBP16.77■□□□□ 0.28
LIMS2-213ENST00000469300 RASGRF1Q13972 1273 aa16.77■□□□□ 0.28
LIMS2-213ENST00000469300 NUCKS1Q9H1E3 243 aaKnown RBP16.77■□□□□ 0.28
LIMS2-213ENST00000469300 FRMPD1Q5SYB0 1578 aa16.77■□□□□ 0.28
LIMS2-213ENST00000469300 CCDC155Q8N6L0 562 aa16.77■□□□□ 0.28
LIMS2-213ENST00000469300 BAG1Q99933 345 aaPredicted RBP16.77■□□□□ 0.28
LIMS2-213ENST00000469300 FRMPD2Q68DX3 1309 aaPredicted RBP16.77■□□□□ 0.27
LIMS2-213ENST00000469300 CMA1P23946 247 aa16.77■□□□□ 0.27
LIMS2-213ENST00000469300 RC3H1Q5TC82 1133 aaKnown RBP16.77■□□□□ 0.27
LIMS2-213ENST00000469300 GADL1Q6ZQY3 521 aa16.77■□□□□ 0.27
LIMS2-213ENST00000469300 TRIML1Q8N9V2 468 aa16.77■□□□□ 0.27
LIMS2-213ENST00000469300 CCPG1Q9ULG6 757 aa16.77■□□□□ 0.27
LIMS2-213ENST00000469300 GCFC2P16383 781 aaKnown RBP16.76■□□□□ 0.27
LIMS2-213ENST00000469300 TSNARE1Q96NA8 513 aa16.76■□□□□ 0.27
LIMS2-213ENST00000469300 BRIP1Q9BX63 1249 aa16.76■□□□□ 0.27
LIMS2-213ENST00000469300 ANTXR1Q9H6X2 564 aa16.76■□□□□ 0.27
LIMS2-213ENST00000469300 MRPL44Q9H9J2 332 aaKnown RBP16.76■□□□□ 0.27
LIMS2-213ENST00000469300 MTMR6Q9Y217 621 aa16.76■□□□□ 0.27
LIMS2-213ENST00000469300 LIFRP42702 1097 aa16.76■□□□□ 0.27
LIMS2-213ENST00000469300 MAP2K1Q02750 393 aaPredicted RBP16.76■□□□□ 0.27
LIMS2-213ENST00000469300 PLCD3Q8N3E9 789 aa16.76■□□□□ 0.27
LIMS2-213ENST00000469300 TEKT3Q9BXF9 490 aa16.76■□□□□ 0.27
LIMS2-213ENST00000469300 FOXP1Q9H334 677 aaPredicted RBP16.76■□□□□ 0.27
LIMS2-213ENST00000469300 ATP6V0A2Q9Y487 856 aa16.76■□□□□ 0.27
LIMS2-213ENST00000469300 NCOA3Q9Y6Q9 1424 aa16.76■□□□□ 0.27
LIMS2-213ENST00000469300 TNFAIP3P21580 790 aa16.76■□□□□ 0.27
LIMS2-213ENST00000469300 LONP1P36776 959 aaKnown RBP16.76■□□□□ 0.27
LIMS2-213ENST00000469300 ZNF445P59923 1031 aa16.76■□□□□ 0.27
LIMS2-213ENST00000469300 ARMC9Q7Z3E5 817 aa16.76■□□□□ 0.27
LIMS2-213ENST00000469300 TPH2Q8IWU9 490 aa16.76■□□□□ 0.27
LIMS2-213ENST00000469300 MTUS1Q9ULD2 1270 aa16.76■□□□□ 0.27
LIMS2-213ENST00000469300 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.76■□□□□ 0.27
LIMS2-213ENST00000469300 CLRN2A0PK11 232 aa16.76■□□□□ 0.27
LIMS2-213ENST00000469300 TESPA1A2RU30 521 aaPredicted RBP16.76■□□□□ 0.27
LIMS2-213ENST00000469300 CD2BP2O95400 341 aaKnown RBP16.76■□□□□ 0.27
LIMS2-213ENST00000469300 IVLP07476 585 aa16.76■□□□□ 0.27
LIMS2-213ENST00000469300 NFE2L3Q9Y4A8 694 aa16.76■□□□□ 0.27
LIMS2-213ENST00000469300 ADAMTS13Q76LX8 1427 aa16.75■□□□□ 0.27
LIMS2-213ENST00000469300 TXNRD1Q16881 649 aa16.75■□□□□ 0.27
LIMS2-213ENST00000469300 INF2Q27J81 1249 aa16.75■□□□□ 0.27
LIMS2-213ENST00000469300 OSBP2Q969R2 916 aa16.75■□□□□ 0.27
LIMS2-213ENST00000469300 TTC14Q96N46 770 aa16.75■□□□□ 0.27
LIMS2-213ENST00000469300 LARSQ9P2J5 1176 aaKnown RBP16.75■□□□□ 0.27
LIMS2-213ENST00000469300 IMPACTQ9P2X3 320 aa16.75■□□□□ 0.27
LIMS2-213ENST00000469300 ECM2O94769 699 aaPredicted RBP16.75■□□□□ 0.27
LIMS2-213ENST00000469300 GCNT3O95395 438 aa16.75■□□□□ 0.27
LIMS2-213ENST00000469300 DYNLL1P63167 89 aaKnown RBP16.75■□□□□ 0.27
LIMS2-213ENST00000469300 FANCCQ00597 558 aa16.75■□□□□ 0.27
LIMS2-213ENST00000469300 PRR16Q569H4 304 aa16.75■□□□□ 0.27
LIMS2-213ENST00000469300 VPS16Q9H269 839 aa16.75■□□□□ 0.27
LIMS2-213ENST00000469300 KCTD2Q14681 263 aa16.75■□□□□ 0.27
LIMS2-213ENST00000469300 DYMQ7RTS9 669 aa16.75■□□□□ 0.27
LIMS2-213ENST00000469300 ARHGEF1Q92888 912 aaKnown RBP16.75■□□□□ 0.27
LIMS2-213ENST00000469300 CUEDC2Q9H467 287 aa16.75■□□□□ 0.27
LIMS2-213ENST00000469300 ABCC12Q96J65 1359 aa16.75■□□□□ 0.27
LIMS2-213ENST00000469300 PTPRMP28827 1452 aa16.75■□□□□ 0.27
LIMS2-213ENST00000469300 BCORL1Q5H9F3 1711 aa16.75■□□□□ 0.27
LIMS2-213ENST00000469300 PLA2G4DQ86XP0 818 aa16.75■□□□□ 0.27
LIMS2-213ENST00000469300 LCORLQ8N3X6 602 aa16.75■□□□□ 0.27
LIMS2-213ENST00000469300 RGS22Q8NE09 1264 aa16.75■□□□□ 0.27
LIMS2-213ENST00000469300 M0R2C6 588 aa16.74■□□□□ 0.27
LIMS2-213ENST00000469300 RAD17O75943 681 aa16.74■□□□□ 0.27
LIMS2-213ENST00000469300 LIN9Q5TKA1 542 aa16.74■□□□□ 0.27
LIMS2-213ENST00000469300 SIRT2Q8IXJ6 389 aa16.74■□□□□ 0.27
LIMS2-213ENST00000469300 PABPN1LA6NDY0 278 aaKnown RBP16.74■□□□□ 0.27
LIMS2-213ENST00000469300 BTBD18B2RXH4 712 aa16.74■□□□□ 0.27
LIMS2-213ENST00000469300 BMP3P12645 472 aa16.74■□□□□ 0.27
LIMS2-213ENST00000469300 MECOMQ03112 1051 aa16.74■□□□□ 0.27
LIMS2-213ENST00000469300 DPH6Q7L8W6 267 aa16.74■□□□□ 0.27
LIMS2-213ENST00000469300 FAM160B2Q86V87 743 aa16.74■□□□□ 0.27
LIMS2-213ENST00000469300 ZBTB8OSQ8IWT0 167 aa16.74■□□□□ 0.27
LIMS2-213ENST00000469300 DEPTORQ8TB45 409 aa16.74■□□□□ 0.27
LIMS2-213ENST00000469300 NAP1L3Q99457 506 aaPredicted RBP16.74■□□□□ 0.27
LIMS2-213ENST00000469300 ADD3Q9UEY8 706 aaKnown RBP16.74■□□□□ 0.27
LIMS2-213ENST00000469300 MINPP1Q9UNW1 487 aa16.74■□□□□ 0.27
LIMS2-213ENST00000469300 ATF5Q9Y2D1 282 aaPredicted RBP16.74■□□□□ 0.27
LIMS2-213ENST00000469300 RFX7Q2KHR2 1363 aa16.74■□□□□ 0.27
LIMS2-213ENST00000469300 GOLGA8HP0CJ92 632 aa16.74■□□□□ 0.27
LIMS2-213ENST00000469300 KRT5P13647 590 aa16.74■□□□□ 0.27
LIMS2-213ENST00000469300 OSBPP22059 807 aa16.74■□□□□ 0.27
LIMS2-213ENST00000469300 SLC9C1Q4G0N8 1177 aa16.74■□□□□ 0.27
LIMS2-213ENST00000469300 DGKHQ86XP1 1220 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms