RNA–Protein interactions for RNA: ENST00000469140.2

MTA1-209, Transcript of metastasis associated 1, humanhuman

TSL 5

Gene MTA1, Length 1,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-209ENST00000469140 USP2O75604 605 aaPredicted RBP27.27■■□□□ 1.96
MTA1-209ENST00000469140 NDUFB10O96000 172 aa27.27■■□□□ 1.96
MTA1-209ENST00000469140 PFKFB3Q16875 520 aaPredicted RBP27.27■■□□□ 1.96
MTA1-209ENST00000469140 SLC35G1Q2M3R5 365 aa27.27■■□□□ 1.96
MTA1-209ENST00000469140 RIOX1Q9H6W3 641 aa27.27■■□□□ 1.96
MTA1-209ENST00000469140 RRAGCQ9HB90 399 aa27.27■■□□□ 1.96
MTA1-209ENST00000469140 GPCPD1Q9NPB8 672 aa27.27■■□□□ 1.96
MTA1-209ENST00000469140 PICK1Q9NRD5 415 aa27.27■■□□□ 1.96
MTA1-209ENST00000469140 BAG4O95429 457 aaKnown RBP27.27■■□□□ 1.96
MTA1-209ENST00000469140 SCG2P13521 617 aa27.27■■□□□ 1.96
MTA1-209ENST00000469140 GUCY1B3Q02153 619 aa27.27■■□□□ 1.96
MTA1-209ENST00000469140 NOL9Q5SY16 702 aaKnown RBP27.27■■□□□ 1.96
MTA1-209ENST00000469140 KRT40Q6A162 431 aa27.27■■□□□ 1.96
MTA1-209ENST00000469140 CDCA5Q96FF9 252 aa27.27■■□□□ 1.96
MTA1-209ENST00000469140 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.27■■□□□ 1.96
MTA1-209ENST00000469140 CLEC11AQ9Y240 323 aa27.27■■□□□ 1.96
MTA1-209ENST00000469140 ATAD5Q96QE3 1844 aa27.26■■□□□ 1.95
MTA1-209ENST00000469140 OTUD7BQ6GQQ9 843 aa27.26■■□□□ 1.95
MTA1-209ENST00000469140 FERMT3Q86UX7 667 aa27.26■■□□□ 1.95
MTA1-209ENST00000469140 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.26■■□□□ 1.95
MTA1-209ENST00000469140 ZKSCAN4Q969J2 545 aaPredicted RBP27.26■■□□□ 1.95
MTA1-209ENST00000469140 VCPKMTQ9H867 229 aa27.26■■□□□ 1.95
MTA1-209ENST00000469140 hCG_1642624A0A1W2PR95 340 aa27.25■■□□□ 1.95
MTA1-209ENST00000469140 DLK2Q6UY11 383 aa27.25■■□□□ 1.95
MTA1-209ENST00000469140 KCTD1Q719H9 257 aa27.25■■□□□ 1.95
MTA1-209ENST00000469140 RRP36Q96EU6 259 aaKnown RBP27.25■■□□□ 1.95
MTA1-209ENST00000469140 UBA5Q9GZZ9 404 aa27.25■■□□□ 1.95
MTA1-209ENST00000469140 GJB4Q9NTQ9 266 aa27.25■■□□□ 1.95
MTA1-209ENST00000469140 BMP3P12645 472 aa27.24■■□□□ 1.95
MTA1-209ENST00000469140 RESTQ13127 1097 aa27.24■■□□□ 1.95
MTA1-209ENST00000469140 NFKBIBQ15653 356 aa27.24■■□□□ 1.95
MTA1-209ENST00000469140 MCTP1Q6DN14 999 aa27.24■■□□□ 1.95
MTA1-209ENST00000469140 WDR18Q9BV38 432 aa27.24■■□□□ 1.95
MTA1-209ENST00000469140 GLIS2Q9BZE0 524 aaPredicted RBP27.24■■□□□ 1.95
MTA1-209ENST00000469140 AS3MTQ9HBK9 375 aa27.24■■□□□ 1.95
MTA1-209ENST00000469140 FZD1Q9UP38 647 aa27.24■■□□□ 1.95
MTA1-209ENST00000469140 DOCK1Q14185 1865 aa27.24■■□□□ 1.95
MTA1-209ENST00000469140 PTPRAP18433 802 aa27.24■■□□□ 1.95
MTA1-209ENST00000469140 MAP3K9P80192 1104 aa27.24■■□□□ 1.95
MTA1-209ENST00000469140 FEZ1Q99689 392 aa27.24■■□□□ 1.95
MTA1-209ENST00000469140 KIAA1683Q9H0B3 1180 aa27.24■■□□□ 1.95
MTA1-209ENST00000469140 CPVLQ9H3G5 476 aa27.24■■□□□ 1.95
MTA1-209ENST00000469140 IREB2P48200 963 aaKnown RBP27.23■■□□□ 1.95
MTA1-209ENST00000469140 PRKG1Q13976 671 aa27.23■■□□□ 1.95
MTA1-209ENST00000469140 TTBK2Q6IQ55 1244 aa27.23■■□□□ 1.95
MTA1-209ENST00000469140 CCDC84Q86UT8 332 aaPredicted RBP27.23■■□□□ 1.95
MTA1-209ENST00000469140 FAM177A1Q8N128 213 aaPredicted RBP27.23■■□□□ 1.95
MTA1-209ENST00000469140 SH3GLB2Q9NR46 395 aa27.23■■□□□ 1.95
MTA1-209ENST00000469140 SEC63Q9UGP8 760 aaKnown RBP27.23■■□□□ 1.95
MTA1-209ENST00000469140 MMP1P03956 469 aa27.22■■□□□ 1.95
MTA1-209ENST00000469140 SAFBQ15424 915 aaKnown RBP eCLIP27.22■■□□□ 1.95
MTA1-209ENST00000469140 PIBF1Q8WXW3 757 aa27.22■■□□□ 1.95
MTA1-209ENST00000469140 ISY1Q9ULR0 285 aaKnown RBP27.22■■□□□ 1.95
MTA1-209ENST00000469140 MYH6P13533 1939 aa27.22■■□□□ 1.95
MTA1-209ENST00000469140 MCM4P33991 863 aa27.21■■□□□ 1.95
MTA1-209ENST00000469140 ADGRF4Q8IZF3 695 aa27.21■■□□□ 1.95
MTA1-209ENST00000469140 VAT1LQ9HCJ6 419 aa27.21■■□□□ 1.95
MTA1-209ENST00000469140 VPS54Q9P1Q0 977 aa27.21■■□□□ 1.95
MTA1-209ENST00000469140 USP17L10C9JJH3 530 aa27.21■■□□□ 1.95
MTA1-209ENST00000469140 POTEIP0CG38 1075 aa27.21■■□□□ 1.95
MTA1-209ENST00000469140 POTEJP0CG39 1038 aa27.21■■□□□ 1.95
MTA1-209ENST00000469140 BTNL9Q6UXG8 535 aa27.21■■□□□ 1.95
MTA1-209ENST00000469140 LDHDQ86WU2 507 aa27.21■■□□□ 1.95
MTA1-209ENST00000469140 SPICE1Q8N0Z3 855 aa27.21■■□□□ 1.95
MTA1-209ENST00000469140 LPAR1Q92633 364 aa27.21■■□□□ 1.95
MTA1-209ENST00000469140 GOLGA6L22H0YM25 854 aa27.2■■□□□ 1.94
MTA1-209ENST00000469140 USP14P54578 494 aa27.2■■□□□ 1.94
MTA1-209ENST00000469140 KIF23Q02241 960 aaPredicted RBP27.2■■□□□ 1.94
MTA1-209ENST00000469140 KIAA1755Q5JYT7 1200 aa27.2■■□□□ 1.94
MTA1-209ENST00000469140 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.2■■□□□ 1.94
MTA1-209ENST00000469140 BRAPQ7Z569 592 aa27.2■■□□□ 1.94
MTA1-209ENST00000469140 ZNF280CQ8ND82 737 aa27.2■■□□□ 1.94
MTA1-209ENST00000469140 PIGSQ96S52 555 aa27.2■■□□□ 1.94
MTA1-209ENST00000469140 NUP88Q99567 741 aaPredicted RBP27.2■■□□□ 1.94
MTA1-209ENST00000469140 PHF20Q9BVI0 1012 aa27.2■■□□□ 1.94
MTA1-209ENST00000469140 JMJD4Q9H9V9 463 aa27.2■■□□□ 1.94
MTA1-209ENST00000469140 hCG_1984214I3L0E3 225 aa27.19■■□□□ 1.94
MTA1-209ENST00000469140 SLC16A2P36021 539 aa27.19■■□□□ 1.94
MTA1-209ENST00000469140 MAP3K11Q16584 847 aa27.19■■□□□ 1.94
MTA1-209ENST00000469140 HOMER1Q86YM7 354 aa27.19■■□□□ 1.94
MTA1-209ENST00000469140 ZNF713Q8N859 430 aaPredicted RBP27.19■■□□□ 1.94
MTA1-209ENST00000469140 MTMR8Q96EF0 704 aa27.19■■□□□ 1.94
MTA1-209ENST00000469140 BARHL2Q9NY43 387 aa27.19■■□□□ 1.94
MTA1-209ENST00000469140 KCNJ14Q9UNX9 436 aa27.19■■□□□ 1.94
MTA1-209ENST00000469140 CSADQ9Y600 493 aa27.19■■□□□ 1.94
MTA1-209ENST00000469140 TMEM232C9JQI7 657 aa27.18■■□□□ 1.94
MTA1-209ENST00000469140 ZYXQ15942 572 aaKnown RBP27.18■■□□□ 1.94
MTA1-209ENST00000469140 FOXD4L6Q3SYB3 417 aaPredicted RBP27.18■■□□□ 1.94
MTA1-209ENST00000469140 MAP1SQ66K74 1059 aaPredicted RBP27.18■■□□□ 1.94
MTA1-209ENST00000469140 FOXD4L3Q6VB84 417 aaPredicted RBP27.18■■□□□ 1.94
MTA1-209ENST00000469140 ZHX2Q9Y6X8 837 aa27.18■■□□□ 1.94
MTA1-209ENST00000469140 BAZ2BQ9UIF8 2168 aaKnown RBP27.18■■□□□ 1.94
MTA1-209ENST00000469140 PNMA6FA0A0J9YX94 578 aa27.17■■□□□ 1.94
MTA1-209ENST00000469140 DDX11L8A8MPP1 907 aa27.17■■□□□ 1.94
MTA1-209ENST00000469140 PLA2G6O60733 806 aa27.17■■□□□ 1.94
MTA1-209ENST00000469140 U2AF2P26368 475 aaKnown RBP eCLIP27.17■■□□□ 1.944e-7■■■□□ 17.3
MTA1-209ENST00000469140 SPP2Q13103 211 aa27.17■■□□□ 1.94
MTA1-209ENST00000469140 GNL2Q13823 731 aaKnown RBP27.17■■□□□ 1.94
MTA1-209ENST00000469140 VGLL4Q14135 290 aa27.17■■□□□ 1.94
MTA1-209ENST00000469140 SHISA4Q96DD7 197 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms