RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 HELLSQ9NRZ9 838 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 SLC5A4Q9NY91 659 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 SUPT16HQ9Y5B9 1047 aaKnown RBP8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 NR2E3Q9Y5X4 410 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 ROBO3Q96MS0 1386 aa8.55□□□□□ -1.04
SNRPD3-205ENST00000468770 VWA5AO00534 786 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 EVI5O60447 810 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 SLC25A27O95847 323 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 TTLL1O95922 423 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 IGHDP01880 384 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 HOXC6P09630 235 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 ADORA2AP29274 412 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 CNGA1P29973 690 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 CCND3P30281 292 aaPredicted RBP8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 STAT3P40763 770 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 TFAP4Q01664 338 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 TMEM132BQ14DG7 1078 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 FAM47AQ5JRC9 791 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 CHD1LQ86WJ1 897 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 TICAM2Q86XR7 235 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 NPLOC4Q8TAT6 608 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 MKL1Q969V6 931 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 RILPL2Q969X0 211 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 CEP95Q96GE4 821 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 NBPF3Q9H094 633 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 FBXO28Q9NVF7 368 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 MTMR4Q9NYA4 1195 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 FLRT1Q9NZU1 646 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 OGDHLQ9ULD0 1010 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 PPP1R9AQ9ULJ8 1098 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 ADAMTS5Q9UNA0 930 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 PLXNB2O15031 1838 aa8.54□□□□□ -1.04
SNRPD3-205ENST00000468770 CEP290O15078 2479 aa8.53□□□□□ -1.04
SNRPD3-205ENST00000468770 IGKV6D-41A0A0C4DH26 115 aa8.53□□□□□ -1.04
SNRPD3-205ENST00000468770 SLC34A2O95436 690 aa8.53□□□□□ -1.04
SNRPD3-205ENST00000468770 NDUFB10O96000 172 aa8.53□□□□□ -1.04
SNRPD3-205ENST00000468770 FCER1AP12319 257 aa8.53□□□□□ -1.04
SNRPD3-205ENST00000468770 CYP2C19P33261 490 aa8.53□□□□□ -1.04
SNRPD3-205ENST00000468770 NUCB1Q02818 461 aa8.53□□□□□ -1.04
SNRPD3-205ENST00000468770 MCMDC2Q4G0Z9 681 aa8.53□□□□□ -1.04
SNRPD3-205ENST00000468770 HABP4Q5JVS0 413 aaKnown RBP8.53□□□□□ -1.04
SNRPD3-205ENST00000468770 ABRAQ8N0Z2 381 aa8.53□□□□□ -1.04
SNRPD3-205ENST00000468770 PRPF38AQ8NAV1 312 aaKnown RBP8.53□□□□□ -1.04
SNRPD3-205ENST00000468770 NEDD1Q8NHV4 660 aa8.53□□□□□ -1.04
SNRPD3-205ENST00000468770 DIS3LQ8TF46 1054 aaKnown RBP8.53□□□□□ -1.04
SNRPD3-205ENST00000468770 NUP88Q99567 741 aaPredicted RBP8.53□□□□□ -1.04
SNRPD3-205ENST00000468770 SLF1Q9BQI6 1058 aa8.53□□□□□ -1.04
SNRPD3-205ENST00000468770 CTDP1Q9Y5B0 961 aaPredicted RBP8.53□□□□□ -1.04
SNRPD3-205ENST00000468770 TSPY2A6NKD2 308 aa8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 RANBP6O60518 1105 aaKnown RBP8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 MSCO60682 206 aa8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 COBLO75128 1261 aa8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 ZBED4O75132 1171 aa8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 COPB2P35606 906 aa8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 SLC4A3P48751 1232 aa8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 CTDSPL2Q05D32 466 aa8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 KCTD2Q14681 263 aa8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 PPP4R3BQ5MIZ7 849 aa8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 VPS53Q5VIR6 699 aa8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 OLFML2BQ68BL8 750 aa8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 SLFN13Q68D06 897 aa8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 LHX8Q68G74 356 aa8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 RIOX2Q8IUF8 465 aa8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 PLEKHM2Q8IWE5 1019 aa8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 LRRC47Q8N1G4 583 aaKnown RBP8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 GMCL1P1Q8NEA9 526 aa8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 FAM227BQ96M60 508 aa8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 MMP19Q99542 508 aa8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 C11orf49Q9H6J7 331 aa8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 INCENPQ9NQS7 918 aa8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 FEM1BQ9UK73 627 aa8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 ISY1Q9ULR0 285 aaKnown RBP8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 SYNPO2Q9UMS6 1093 aa8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 COLQQ9Y215 455 aaPredicted RBP8.52□□□□□ -1.05
SNRPD3-205ENST00000468770 A0A0D9SFI3 127 aa8.51□□□□□ -1.05
SNRPD3-205ENST00000468770 FOXP2O15409 715 aa8.51□□□□□ -1.05
SNRPD3-205ENST00000468770 FGAP02671 866 aa8.51□□□□□ -1.05
SNRPD3-205ENST00000468770 HSPD1P10809 573 aaKnown RBP8.51□□□□□ -1.05
SNRPD3-205ENST00000468770 BMP3P12645 472 aa8.51□□□□□ -1.05
SNRPD3-205ENST00000468770 SDSP20132 328 aa8.51□□□□□ -1.05
SNRPD3-205ENST00000468770 MNX1P50219 401 aaPredicted RBP8.51□□□□□ -1.05
SNRPD3-205ENST00000468770 MFAP1P55081 439 aaKnown RBP8.51□□□□□ -1.05
SNRPD3-205ENST00000468770 NMIQ13287 307 aaPredicted RBP8.51□□□□□ -1.05
SNRPD3-205ENST00000468770 ALX1Q15699 326 aa8.51□□□□□ -1.05
SNRPD3-205ENST00000468770 SNRNP48Q6IEG0 339 aaKnown RBP8.51□□□□□ -1.05
SNRPD3-205ENST00000468770 CHRDL2Q6WN34 429 aa8.51□□□□□ -1.05
SNRPD3-205ENST00000468770 CPXCR1Q8N123 301 aa8.51□□□□□ -1.05
SNRPD3-205ENST00000468770 REPS2Q8NFH8 660 aa8.51□□□□□ -1.05
SNRPD3-205ENST00000468770 KIFC2Q96AC6 838 aa8.51□□□□□ -1.05
SNRPD3-205ENST00000468770 TEX13BQ9BXU2 312 aa8.51□□□□□ -1.05
SNRPD3-205ENST00000468770 OSBPL3Q9H4L5 887 aa8.51□□□□□ -1.05
SNRPD3-205ENST00000468770 TOMM22Q9NS69 142 aa8.51□□□□□ -1.05
SNRPD3-205ENST00000468770 DDX20Q9UHI6 824 aaKnown RBP8.51□□□□□ -1.05
SNRPD3-205ENST00000468770 ANAPC4Q9UJX5 808 aa8.51□□□□□ -1.05
SNRPD3-205ENST00000468770 ZNF214Q9UL59 606 aaPredicted RBP8.51□□□□□ -1.05
SNRPD3-205ENST00000468770 STX8Q9UNK0 236 aa8.51□□□□□ -1.05
SNRPD3-205ENST00000468770 RLFQ13129 1914 aa8.5□□□□□ -1.05
SNRPD3-205ENST00000468770 PLIN4Q96Q06 1357 aa8.5□□□□□ -1.05
SNRPD3-205ENST00000468770 TMEM232C9JQI7 657 aa8.5□□□□□ -1.05
SNRPD3-205ENST00000468770 ATP2A1O14983 1001 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms