RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 GPHNQ9NQX3 736 aaPredicted RBP13.17□□□□□ -0.3
MSH5-214ENST00000468602 RBM28Q9NW13 759 aaKnown RBP13.17□□□□□ -0.3
MSH5-214ENST00000468602 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.17□□□□□ -0.3
MSH5-214ENST00000468602 MAD2L2Q9UI95 211 aa13.17□□□□□ -0.3
MSH5-214ENST00000468602 ADAMTS5Q9UNA0 930 aa13.17□□□□□ -0.3
MSH5-214ENST00000468602 AGTPBP1Q9UPW5 1226 aa13.17□□□□□ -0.3
MSH5-214ENST00000468602 VCAM1P19320 739 aa13.16□□□□□ -0.3
MSH5-214ENST00000468602 KIF5BP33176 963 aa13.16□□□□□ -0.3
MSH5-214ENST00000468602 GNAQP50148 359 aa13.16□□□□□ -0.3
MSH5-214ENST00000468602 KIAA1755Q5JYT7 1200 aa13.16□□□□□ -0.3
MSH5-214ENST00000468602 SLFN13Q68D06 897 aa13.16□□□□□ -0.3
MSH5-214ENST00000468602 GPAT2Q6NUI2 795 aa13.16□□□□□ -0.3
MSH5-214ENST00000468602 SYNE3Q6ZMZ3 975 aa13.16□□□□□ -0.3
MSH5-214ENST00000468602 FANCBQ8NB91 859 aa13.16□□□□□ -0.3
MSH5-214ENST00000468602 RGS22Q8NE09 1264 aa13.16□□□□□ -0.3
MSH5-214ENST00000468602 MTMR8Q96EF0 704 aa13.16□□□□□ -0.3
MSH5-214ENST00000468602 TCEANC2Q96MN5 208 aa13.16□□□□□ -0.3
MSH5-214ENST00000468602 LRRC2Q9BYS8 371 aa13.16□□□□□ -0.3
MSH5-214ENST00000468602 FAM217BQ9NTX9 383 aaPredicted RBP13.16□□□□□ -0.3
MSH5-214ENST00000468602 TPCN1Q9ULQ1 816 aa13.16□□□□□ -0.3
MSH5-214ENST00000468602 ABT1Q9ULW3 272 aaKnown RBP13.16□□□□□ -0.3
MSH5-214ENST00000468602 KLF18A0A0U1RQI7 1052 aa13.15□□□□□ -0.3
MSH5-214ENST00000468602 TRIM75PA6NK02 468 aa13.15□□□□□ -0.3
MSH5-214ENST00000468602 ZBTB43O43298 467 aa13.15□□□□□ -0.3
MSH5-214ENST00000468602 BMP3P12645 472 aa13.15□□□□□ -0.3
MSH5-214ENST00000468602 SLC1A4P43007 532 aa13.15□□□□□ -0.3
MSH5-214ENST00000468602 HMGCS2P54868 508 aa13.15□□□□□ -0.3
MSH5-214ENST00000468602 APOBRQ0VD83 1088 aa13.15□□□□□ -0.3
MSH5-214ENST00000468602 FUT2Q10981 343 aa13.15□□□□□ -0.3
MSH5-214ENST00000468602 PABPC4Q13310 644 aaKnown RBP eCLIP13.15□□□□□ -0.3
MSH5-214ENST00000468602 NTRK3Q16288 839 aa13.15□□□□□ -0.3
MSH5-214ENST00000468602 CATSPERGQ6ZRH7 1159 aa13.15□□□□□ -0.3
MSH5-214ENST00000468602 CCDC84Q86UT8 332 aaPredicted RBP13.15□□□□□ -0.3
MSH5-214ENST00000468602 FAM160B2Q86V87 743 aa13.15□□□□□ -0.3
MSH5-214ENST00000468602 TEX2Q8IWB9 1127 aa13.15□□□□□ -0.3
MSH5-214ENST00000468602 FAM177A1Q8N128 213 aaPredicted RBP13.15□□□□□ -0.3
MSH5-214ENST00000468602 LRRC47Q8N1G4 583 aaKnown RBP13.15□□□□□ -0.3
MSH5-214ENST00000468602 GTF3C2Q8WUA4 911 aaPredicted RBP13.15□□□□□ -0.3
MSH5-214ENST00000468602 SPZ1Q9BXG8 430 aa13.15□□□□□ -0.3
MSH5-214ENST00000468602 MAF1Q9H063 256 aa13.15□□□□□ -0.3
MSH5-214ENST00000468602 RIOX1Q9H6W3 641 aa13.15□□□□□ -0.3
MSH5-214ENST00000468602 TMOD4Q9NZQ9 345 aa13.15□□□□□ -0.3
MSH5-214ENST00000468602 FEM1BQ9UK73 627 aa13.15□□□□□ -0.3
MSH5-214ENST00000468602 USP17L15C9J2P7 530 aa13.14□□□□□ -0.31
MSH5-214ENST00000468602 USP17L13C9JLJ4 530 aa13.14□□□□□ -0.31
MSH5-214ENST00000468602 USP17L11C9JVI0 530 aa13.14□□□□□ -0.31
MSH5-214ENST00000468602 USP17L18D6R9N7 530 aa13.14□□□□□ -0.31
MSH5-214ENST00000468602 USP17L22D6RA61 530 aa13.14□□□□□ -0.31
MSH5-214ENST00000468602 USP17L17D6RBQ6 530 aa13.14□□□□□ -0.31
MSH5-214ENST00000468602 USP17L19D6RCP7 530 aa13.14□□□□□ -0.31
MSH5-214ENST00000468602 USP17L20D6RJB6 530 aa13.14□□□□□ -0.31
MSH5-214ENST00000468602 ATP2A1O14983 1001 aa13.14□□□□□ -0.31
MSH5-214ENST00000468602 DHX16O60231 1041 aaKnown RBP13.14□□□□□ -0.31
MSH5-214ENST00000468602 CD2BP2O95400 341 aaKnown RBP13.14□□□□□ -0.31
MSH5-214ENST00000468602 PARP1P09874 1014 aaKnown RBP13.14□□□□□ -0.31
MSH5-214ENST00000468602 IFNAR1P17181 557 aa13.14□□□□□ -0.31
MSH5-214ENST00000468602 FGD1P98174 961 aa13.14□□□□□ -0.31
MSH5-214ENST00000468602 USP17L24Q0WX57 530 aa13.14□□□□□ -0.31
MSH5-214ENST00000468602 SREBF2Q12772 1141 aa13.14□□□□□ -0.31
MSH5-214ENST00000468602 CUL4AQ13619 759 aa13.14□□□□□ -0.31
MSH5-214ENST00000468602 ME3Q16798 604 aa13.14□□□□□ -0.31
MSH5-214ENST00000468602 NFXL1Q6ZNB6 911 aa13.14□□□□□ -0.31
MSH5-214ENST00000468602 CTCFLQ8NI51 663 aaPredicted RBP13.14□□□□□ -0.31
MSH5-214ENST00000468602 CHURC1Q8WUH1 139 aa13.14□□□□□ -0.31
MSH5-214ENST00000468602 BRI3BPQ8WY22 251 aa13.14□□□□□ -0.31
MSH5-214ENST00000468602 GTF3C6Q969F1 213 aa13.14□□□□□ -0.31
MSH5-214ENST00000468602 FEZ1Q99689 392 aa13.14□□□□□ -0.31
MSH5-214ENST00000468602 LLPHQ9BRT6 129 aaKnown RBP13.14□□□□□ -0.31
MSH5-214ENST00000468602 PNMA2Q9UL42 364 aa13.14□□□□□ -0.31
MSH5-214ENST00000468602 A0A0G2JMZ2 1700 aa13.13□□□□□ -0.31
MSH5-214ENST00000468602 TMTC3Q6ZXV5 915 aa13.13□□□□□ -0.31
MSH5-214ENST00000468602 PRPF38AQ8NAV1 312 aaKnown RBP13.13□□□□□ -0.31
MSH5-214ENST00000468602 INTS4Q96HW7 963 aaKnown RBP13.13□□□□□ -0.31
MSH5-214ENST00000468602 CAPNS2Q96L46 248 aa13.13□□□□□ -0.31
MSH5-214ENST00000468602 PTPN18Q99952 460 aa13.13□□□□□ -0.31
MSH5-214ENST00000468602 HOXC10Q9NYD6 342 aa13.13□□□□□ -0.31
MSH5-214ENST00000468602 RBM27Q9P2N5 1060 aaKnown RBP13.13□□□□□ -0.31
MSH5-214ENST00000468602 CCL15-CCL14A0A0B4J2E2 113 aa13.12□□□□□ -0.31
MSH5-214ENST00000468602 KLRF2D3W0D1 207 aa13.12□□□□□ -0.31
MSH5-214ENST00000468602 ALDH1A1P00352 501 aa13.12□□□□□ -0.31
MSH5-214ENST00000468602 CDC27P30260 824 aa13.12□□□□□ -0.31
MSH5-214ENST00000468602 DSG3P32926 999 aa13.12□□□□□ -0.31
MSH5-214ENST00000468602 METAP2P50579 478 aaKnown RBP eCLIP13.12□□□□□ -0.31
MSH5-214ENST00000468602 STAT2P52630 851 aa13.12□□□□□ -0.31
MSH5-214ENST00000468602 OAZ1P54368 228 aa13.12□□□□□ -0.31
MSH5-214ENST00000468602 ATP2B2Q01814 1243 aa13.12□□□□□ -0.31
MSH5-214ENST00000468602 COG2Q14746 738 aa13.12□□□□□ -0.31
MSH5-214ENST00000468602 CCL15Q16663 113 aa13.12□□□□□ -0.31
MSH5-214ENST00000468602 RTN1Q16799 776 aa13.12□□□□□ -0.31
MSH5-214ENST00000468602 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.12□□□□□ -0.31
MSH5-214ENST00000468602 MB21D1Q8N884 522 aa13.12□□□□□ -0.31
MSH5-214ENST00000468602 TMX3Q96JJ7 454 aa13.12□□□□□ -0.31
MSH5-214ENST00000468602 PNMA3Q9UL41 463 aa13.12□□□□□ -0.31
MSH5-214ENST00000468602 PPP1R9AQ9ULJ8 1098 aa13.12□□□□□ -0.31
MSH5-214ENST00000468602 ADGRA2Q96PE1 1338 aa13.12□□□□□ -0.31
MSH5-214ENST00000468602 WDR33Q9C0J8 1336 aaKnown RBP13.12□□□□□ -0.31
MSH5-214ENST00000468602 STK36Q9NRP7 1315 aa13.12□□□□□ -0.31
MSH5-214ENST00000468602 GOLGA8AA7E2F4 631 aa13.11□□□□□ -0.31
MSH5-214ENST00000468602 GOLGA8BA8MQT2 603 aa13.11□□□□□ -0.31
MSH5-214ENST00000468602 BTBD19C9JJ37 291 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms