RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 HERVK_113P62684 666 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 IRX3P78415 501 aaPredicted RBP13.3□□□□□ -0.28
COL4A6-205ENST00000468338 USP17L24Q0WX57 530 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 MCMDC2Q4G0Z9 681 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 LBX2Q6XYB7 198 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 CCDC129Q6ZRS4 1044 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 GTF3C2Q8WUA4 911 aaPredicted RBP13.3□□□□□ -0.28
COL4A6-205ENST00000468338 SLC39A7Q92504 469 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 KANSL2Q9H9L4 492 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 TXNRD2Q9NNW7 524 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 RBPJLQ9UBG7 517 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 RLFQ13129 1914 aa13.3□□□□□ -0.28
COL4A6-205ENST00000468338 IGKV6D-41A0A0C4DH26 115 aa13.29□□□□□ -0.28
COL4A6-205ENST00000468338 TRIM6-TRIM34B2RNG4 842 aa13.29□□□□□ -0.28
COL4A6-205ENST00000468338 SLC34A2O95436 690 aa13.29□□□□□ -0.28
COL4A6-205ENST00000468338 FMNL1O95466 1100 aaPredicted RBP13.29□□□□□ -0.28
COL4A6-205ENST00000468338 SDSP20132 328 aa13.29□□□□□ -0.28
COL4A6-205ENST00000468338 ICA1Q05084 483 aa13.29□□□□□ -0.28
COL4A6-205ENST00000468338 NMIQ13287 307 aaPredicted RBP13.29□□□□□ -0.28
COL4A6-205ENST00000468338 ZYXQ15942 572 aaKnown RBP13.29□□□□□ -0.28
COL4A6-205ENST00000468338 KIAA1755Q5JYT7 1200 aa13.29□□□□□ -0.28
COL4A6-205ENST00000468338 VPS53Q5VIR6 699 aa13.29□□□□□ -0.28
COL4A6-205ENST00000468338 CLEC10AQ8IUN9 316 aa13.29□□□□□ -0.28
COL4A6-205ENST00000468338 LPAR1Q92633 364 aa13.29□□□□□ -0.28
COL4A6-205ENST00000468338 ZNF333Q96JL9 665 aa13.29□□□□□ -0.28
COL4A6-205ENST00000468338 PCMTD1Q96MG8 357 aaPredicted RBP13.29□□□□□ -0.28
COL4A6-205ENST00000468338 NAPBQ9H115 298 aa13.29□□□□□ -0.28
COL4A6-205ENST00000468338 ANAPC4Q9UJX5 808 aa13.29□□□□□ -0.28
COL4A6-205ENST00000468338 FGRP09769 529 aa13.28□□□□□ -0.28
COL4A6-205ENST00000468338 EEF2P13639 858 aaKnown RBP13.28□□□□□ -0.28
COL4A6-205ENST00000468338 PPARAQ07869 468 aa13.28□□□□□ -0.28
COL4A6-205ENST00000468338 IRF5Q13568 498 aa13.28□□□□□ -0.28
COL4A6-205ENST00000468338 ZNF589Q86UQ0 364 aaPredicted RBP13.28□□□□□ -0.28
COL4A6-205ENST00000468338 RILPL2Q969X0 211 aa13.28□□□□□ -0.28
COL4A6-205ENST00000468338 RPAP3Q9H6T3 665 aaPredicted RBP13.28□□□□□ -0.28
COL4A6-205ENST00000468338 VCPKMTQ9H867 229 aa13.28□□□□□ -0.28
COL4A6-205ENST00000468338 MKNK2Q9HBH9 465 aa13.28□□□□□ -0.28
COL4A6-205ENST00000468338 ZNF287Q9HBT7 754 aa13.28□□□□□ -0.28
COL4A6-205ENST00000468338 ARHGEF10LQ9HCE6 1279 aa13.28□□□□□ -0.28
COL4A6-205ENST00000468338 GJD2Q9UKL4 321 aa13.28□□□□□ -0.28
COL4A6-205ENST00000468338 GABRQQ9UN88 632 aa13.28□□□□□ -0.28
COL4A6-205ENST00000468338 MYPNQ86TC9 1320 aa13.28□□□□□ -0.28
COL4A6-205ENST00000468338 PLIN4Q96Q06 1357 aa13.28□□□□□ -0.28
COL4A6-205ENST00000468338 CENPFP49454 3210 aa13.28□□□□□ -0.28
COL4A6-205ENST00000468338 RBBP6Q7Z6E9 1792 aaKnown RBP13.27□□□□□ -0.28
COL4A6-205ENST00000468338 TNPO2O14787 897 aaKnown RBP13.27□□□□□ -0.29
COL4A6-205ENST00000468338 MAP3K7O43318 606 aa13.27□□□□□ -0.29
COL4A6-205ENST00000468338 CNMDO75829 334 aa13.27□□□□□ -0.29
COL4A6-205ENST00000468338 FGAP02671 866 aa13.27□□□□□ -0.29
COL4A6-205ENST00000468338 HSPD1P10809 573 aaKnown RBP13.27□□□□□ -0.29
COL4A6-205ENST00000468338 PRKCZQ05513 592 aa13.27□□□□□ -0.29
COL4A6-205ENST00000468338 Q3C1V9 767 aa13.27□□□□□ -0.29
COL4A6-205ENST00000468338 GPRC5AQ8NFJ5 357 aa13.27□□□□□ -0.29
COL4A6-205ENST00000468338 MKL1Q969V6 931 aa13.27□□□□□ -0.29
COL4A6-205ENST00000468338 SH2D4AQ9H788 454 aa13.27□□□□□ -0.29
COL4A6-205ENST00000468338 NYAP2Q9P242 653 aa13.27□□□□□ -0.29
COL4A6-205ENST00000468338 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.27□□□□□ -0.29
COL4A6-205ENST00000468338 RABGAP1Q9Y3P9 1069 aa13.27□□□□□ -0.29
COL4A6-205ENST00000468338 ZMYM6O95789 1325 aa13.27□□□□□ -0.29
COL4A6-205ENST00000468338 PEX10O60683 326 aa13.26□□□□□ -0.29
COL4A6-205ENST00000468338 PRDM1O75626 825 aa13.26□□□□□ -0.29
COL4A6-205ENST00000468338 GABBR2O75899 941 aa13.26□□□□□ -0.29
COL4A6-205ENST00000468338 C7P10643 843 aa13.26□□□□□ -0.29
COL4A6-205ENST00000468338 GSPT1P15170 499 aaKnown RBP13.26□□□□□ -0.29
COL4A6-205ENST00000468338 CLCN1P35523 988 aa13.26□□□□□ -0.29
COL4A6-205ENST00000468338 FLT3LGP49771 235 aa13.26□□□□□ -0.29
COL4A6-205ENST00000468338 SOX10P56693 466 aa13.26□□□□□ -0.29
COL4A6-205ENST00000468338 ERVK-9P63128 1117 aa13.26□□□□□ -0.29
COL4A6-205ENST00000468338 ERVK-24P63145 666 aa13.26□□□□□ -0.29
COL4A6-205ENST00000468338 PDE4BQ07343 736 aa13.26□□□□□ -0.29
COL4A6-205ENST00000468338 COG2Q14746 738 aa13.26□□□□□ -0.29
COL4A6-205ENST00000468338 PARP14Q460N5 1801 aa13.26□□□□□ -0.29
COL4A6-205ENST00000468338 SLC9C1Q4G0N8 1177 aa13.26□□□□□ -0.29
COL4A6-205ENST00000468338 TTC22Q5TAA0 569 aa13.26□□□□□ -0.29
COL4A6-205ENST00000468338 CCDC171Q6TFL3 1326 aa13.26□□□□□ -0.29
COL4A6-205ENST00000468338 NBPF11Q86T75 865 aa13.26□□□□□ -0.29
COL4A6-205ENST00000468338 ZNF444Q8N0Y2 327 aaPredicted RBP13.26□□□□□ -0.29
COL4A6-205ENST00000468338 NEDD1Q8NHV4 660 aa13.26□□□□□ -0.29
COL4A6-205ENST00000468338 PXYLP1Q8TE99 480 aa13.26□□□□□ -0.29
COL4A6-205ENST00000468338 SYNPO2Q9UMS6 1093 aa13.26□□□□□ -0.29
COL4A6-205ENST00000468338 TACC3Q9Y6A5 838 aa13.26□□□□□ -0.29
COL4A6-205ENST00000468338 PLXNB2O15031 1838 aa13.25□□□□□ -0.29
COL4A6-205ENST00000468338 HIP1O00291 1037 aa13.25□□□□□ -0.29
COL4A6-205ENST00000468338 WDR46O15213 610 aaKnown RBP13.25□□□□□ -0.29
COL4A6-205ENST00000468338 SLC3A2P08195 630 aaKnown RBP13.25□□□□□ -0.29
COL4A6-205ENST00000468338 GRK4P32298 578 aa13.25□□□□□ -0.29
COL4A6-205ENST00000468338 STK11IPQ8N1F8 1099 aa13.25□□□□□ -0.29
COL4A6-205ENST00000468338 RAET1EQ8TD07 263 aa13.25□□□□□ -0.29
COL4A6-205ENST00000468338 COA7Q96BR5 231 aa13.25□□□□□ -0.29
COL4A6-205ENST00000468338 MTMR4Q9NYA4 1195 aa13.25□□□□□ -0.29
COL4A6-205ENST00000468338 HOXC10Q9NYD6 342 aa13.25□□□□□ -0.29
COL4A6-205ENST00000468338 ADAMTS5Q9UNA0 930 aa13.25□□□□□ -0.29
COL4A6-205ENST00000468338 MYH4Q9Y623 1939 aa13.25□□□□□ -0.29
COL4A6-205ENST00000468338 POTEFA5A3E0 1075 aa13.24□□□□□ -0.29
COL4A6-205ENST00000468338 ORC4O43929 436 aa13.24□□□□□ -0.29
COL4A6-205ENST00000468338 NOVP48745 357 aa13.24□□□□□ -0.29
COL4A6-205ENST00000468338 SLAIN1Q8ND83 568 aa13.24□□□□□ -0.29
COL4A6-205ENST00000468338 SH3TC2Q8TF17 1288 aa13.24□□□□□ -0.29
COL4A6-205ENST00000468338 USP6NLQ92738 828 aa13.24□□□□□ -0.29
COL4A6-205ENST00000468338 CEP95Q96GE4 821 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms