RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 SLITRK5O94991 958 aa5.83□□□□□ -1.48
VPS13A-209ENST00000467124 CYP7A1P22680 504 aa5.83□□□□□ -1.48
VPS13A-209ENST00000467124 CHRNA4P43681 627 aa5.83□□□□□ -1.48
VPS13A-209ENST00000467124 PPP2R2AP63151 447 aa5.83□□□□□ -1.48
VPS13A-209ENST00000467124 AMPD3Q01432 767 aa5.83□□□□□ -1.48
VPS13A-209ENST00000467124 SNW1Q13573 536 aaKnown RBP5.83□□□□□ -1.48
VPS13A-209ENST00000467124 TMEM67Q5HYA8 995 aa5.83□□□□□ -1.48
VPS13A-209ENST00000467124 NBPF12Q5TAG4 269 aaPredicted RBP5.83□□□□□ -1.48
VPS13A-209ENST00000467124 CD163Q86VB7 1156 aa5.83□□□□□ -1.48
VPS13A-209ENST00000467124 ZNF227Q86WZ6 799 aa5.83□□□□□ -1.48
VPS13A-209ENST00000467124 UBR7Q8N806 425 aa5.83□□□□□ -1.48
VPS13A-209ENST00000467124 DNAJB8Q8NHS0 232 aa5.83□□□□□ -1.48
VPS13A-209ENST00000467124 RNF141Q8WVD5 230 aa5.83□□□□□ -1.48
VPS13A-209ENST00000467124 KREMEN1Q96MU8 473 aa5.83□□□□□ -1.48
VPS13A-209ENST00000467124 FAM83CQ9BQN1 747 aa5.83□□□□□ -1.48
VPS13A-209ENST00000467124 FAM126AQ9BYI3 521 aaPredicted RBP5.83□□□□□ -1.48
VPS13A-209ENST00000467124 PRDM10Q9NQV6 1147 aa5.83□□□□□ -1.48
VPS13A-209ENST00000467124 PRR13Q9NZ81 148 aa5.83□□□□□ -1.48
VPS13A-209ENST00000467124 MINPP1Q9UNW1 487 aa5.83□□□□□ -1.48
VPS13A-209ENST00000467124 CEP131Q9UPN4 1083 aa5.83□□□□□ -1.48
VPS13A-209ENST00000467124 NOP58Q9Y2X3 529 aaKnown RBP5.83□□□□□ -1.48
VPS13A-209ENST00000467124 CNTNAP4Q9C0A0 1308 aa5.82□□□□□ -1.48
VPS13A-209ENST00000467124 TRAV20A0A0B4J274 112 aa5.82□□□□□ -1.48
VPS13A-209ENST00000467124 KRBA1A5PL33 1030 aa5.82□□□□□ -1.48
VPS13A-209ENST00000467124 MEIS1O00470 390 aa5.82□□□□□ -1.48
VPS13A-209ENST00000467124 CNGA1P29973 690 aa5.82□□□□□ -1.48
VPS13A-209ENST00000467124 EVA1CP58658 441 aa5.82□□□□□ -1.48
VPS13A-209ENST00000467124 CPSF6Q16630 551 aaKnown RBP eCLIP5.82□□□□□ -1.48
VPS13A-209ENST00000467124 BEND4Q6ZU67 534 aa5.82□□□□□ -1.48
VPS13A-209ENST00000467124 C22orf34Q6ZV56 151 aa5.82□□□□□ -1.48
VPS13A-209ENST00000467124 TOP6BLQ8N6T0 577 aa5.82□□□□□ -1.48
VPS13A-209ENST00000467124 BTN2A2Q8WVV5 523 aa5.82□□□□□ -1.48
VPS13A-209ENST00000467124 TRBV23-1A0A0A0MS06 115 aa5.81□□□□□ -1.48
VPS13A-209ENST00000467124 C1QTNF9BB2RNN3 333 aa5.81□□□□□ -1.48
VPS13A-209ENST00000467124 SHOXO15266 292 aa5.81□□□□□ -1.48
VPS13A-209ENST00000467124 GSC2O15499 205 aa5.81□□□□□ -1.48
VPS13A-209ENST00000467124 LEFTY1O75610 366 aa5.81□□□□□ -1.48
VPS13A-209ENST00000467124 KCNH1O95259 989 aa5.81□□□□□ -1.48
VPS13A-209ENST00000467124 MYCLP1P12525 358 aaPredicted RBP5.81□□□□□ -1.48
VPS13A-209ENST00000467124 CD247P20963 164 aa5.81□□□□□ -1.48
VPS13A-209ENST00000467124 CYP27A1Q02318 531 aa5.81□□□□□ -1.48
VPS13A-209ENST00000467124 KCNMA1Q12791 1236 aa5.81□□□□□ -1.48
VPS13A-209ENST00000467124 PABPC4Q13310 644 aaKnown RBP eCLIP5.81□□□□□ -1.48
VPS13A-209ENST00000467124 AUHQ13825 339 aaKnown RBP5.81□□□□□ -1.48
VPS13A-209ENST00000467124 SF1Q15637 639 aaKnown RBP5.81□□□□□ -1.48
VPS13A-209ENST00000467124 ANKRD39Q53RE8 183 aa5.81□□□□□ -1.48
VPS13A-209ENST00000467124 ZNF513Q8N8E2 541 aaPredicted RBP5.81□□□□□ -1.48
VPS13A-209ENST00000467124 ZCRB1Q8TBF4 217 aaKnown RBP5.81□□□□□ -1.48
VPS13A-209ENST00000467124 FBXL18Q96ME1 805 aa5.81□□□□□ -1.48
VPS13A-209ENST00000467124 ZDHHC15Q96MV8 337 aa5.81□□□□□ -1.48
VPS13A-209ENST00000467124 CLUHP3Q96NS8 147 aa5.81□□□□□ -1.48
VPS13A-209ENST00000467124 SLC26A8Q96RN1 970 aa5.81□□□□□ -1.48
VPS13A-209ENST00000467124 AARSD1Q9BTE6 412 aaKnown RBP5.81□□□□□ -1.48
VPS13A-209ENST00000467124 KCNF1Q9H3M0 494 aa5.81□□□□□ -1.48
VPS13A-209ENST00000467124 NOL6Q9H6R4 1146 aaKnown RBP5.81□□□□□ -1.48
VPS13A-209ENST00000467124 GP6Q9HCN6 339 aa5.81□□□□□ -1.48
VPS13A-209ENST00000467124 C1GALT1Q9NS00 363 aa5.81□□□□□ -1.48
VPS13A-209ENST00000467124 TPX2Q9ULW0 747 aaKnown RBP5.81□□□□□ -1.48
VPS13A-209ENST00000467124 AKT3Q9Y243 479 aa5.81□□□□□ -1.48
VPS13A-209ENST00000467124 MRPS23Q9Y3D9 190 aaKnown RBP5.81□□□□□ -1.48
VPS13A-209ENST00000467124 CBX7O95931 251 aa5.8□□□□□ -1.48
VPS13A-209ENST00000467124 KIR3DL1P43629 444 aa5.8□□□□□ -1.48
VPS13A-209ENST00000467124 GATA4P43694 442 aa5.8□□□□□ -1.48
VPS13A-209ENST00000467124 HSP90AA2PQ14568 343 aaPredicted RBP5.8□□□□□ -1.48
VPS13A-209ENST00000467124 NFKBIBQ15653 356 aa5.8□□□□□ -1.48
VPS13A-209ENST00000467124 LONRF2Q1L5Z9 754 aa5.8□□□□□ -1.48
VPS13A-209ENST00000467124 ZC3H12BQ5HYM0 836 aaKnown RBP5.8□□□□□ -1.48
VPS13A-209ENST00000467124 NOL9Q5SY16 702 aaKnown RBP5.8□□□□□ -1.48
VPS13A-209ENST00000467124 CNNM4Q6P4Q7 775 aa5.8□□□□□ -1.48
VPS13A-209ENST00000467124 NIM1KQ8IY84 436 aa5.8□□□□□ -1.48
VPS13A-209ENST00000467124 C7orf61Q8IZ16 206 aa5.8□□□□□ -1.48
VPS13A-209ENST00000467124 SGSM3Q96HU1 749 aa5.8□□□□□ -1.48
VPS13A-209ENST00000467124 IPO9Q96P70 1041 aaKnown RBP5.8□□□□□ -1.48
VPS13A-209ENST00000467124 IER2Q9BTL4 223 aa5.8□□□□□ -1.48
VPS13A-209ENST00000467124 DHRS4Q9BTZ2 278 aa5.8□□□□□ -1.48
VPS13A-209ENST00000467124 DUSP23Q9BVJ7 150 aa5.8□□□□□ -1.48
VPS13A-209ENST00000467124 GBP3Q9H0R5 595 aa5.8□□□□□ -1.48
VPS13A-209ENST00000467124 TMX1Q9H3N1 280 aa5.8□□□□□ -1.48
VPS13A-209ENST00000467124 GFOD1Q9NXC2 390 aa5.8□□□□□ -1.48
VPS13A-209ENST00000467124 KLHL42Q9P2K6 505 aa5.8□□□□□ -1.48
VPS13A-209ENST00000467124 GTF2IRD1Q9UHL9 959 aa5.8□□□□□ -1.48
VPS13A-209ENST00000467124 RAXQ9Y2V3 346 aa5.8□□□□□ -1.48
VPS13A-209ENST00000467124 PRKAB1Q9Y478 270 aa5.8□□□□□ -1.48
VPS13A-209ENST00000467124 COL17A1Q9UMD9 1497 aaPredicted RBP5.79□□□□□ -1.48
VPS13A-209ENST00000467124 IGF2BP3O00425 579 aaKnown RBP eCLIP5.79□□□□□ -1.48
VPS13A-209ENST00000467124 NOP56O00567 594 aaKnown RBP5.79□□□□□ -1.48
VPS13A-209ENST00000467124 VAMP4O75379 141 aa5.79□□□□□ -1.48
VPS13A-209ENST00000467124 PPM1BO75688 479 aa5.79□□□□□ -1.48
VPS13A-209ENST00000467124 PABPC1P11940 636 aaKnown RBP5.79□□□□□ -1.48
VPS13A-209ENST00000467124 ITGA4P13612 1032 aa5.79□□□□□ -1.48
VPS13A-209ENST00000467124 SDSP20132 328 aa5.79□□□□□ -1.48
VPS13A-209ENST00000467124 ZNF445P59923 1031 aa5.79□□□□□ -1.48
VPS13A-209ENST00000467124 DPY19L1Q2PZI1 675 aa5.79□□□□□ -1.48
VPS13A-209ENST00000467124 CYP27C1Q4G0S4 372 aa5.79□□□□□ -1.48
VPS13A-209ENST00000467124 NSMFQ6X4W1 530 aa5.79□□□□□ -1.48
VPS13A-209ENST00000467124 TMC3Q7Z5M5 1100 aa5.79□□□□□ -1.48
VPS13A-209ENST00000467124 ZAR1Q86SH2 424 aa5.79□□□□□ -1.48
VPS13A-209ENST00000467124 SLC51AQ86UW1 340 aa5.79□□□□□ -1.48
VPS13A-209ENST00000467124 JAMLQ86YT9 394 aa5.79□□□□□ -1.48
VPS13A-209ENST00000467124 RPUSD2Q8IZ73 545 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms