RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 PATL2C9JE40 543 aaKnown RBP7.83□□□□□ -1.16
UBXN4-205ENST00000467065 USP17L12C9JPN9 530 aa7.83□□□□□ -1.16
UBXN4-205ENST00000467065 USP17L21D6R901 530 aa7.83□□□□□ -1.16
UBXN4-205ENST00000467065 INHAP05111 366 aa7.83□□□□□ -1.16
UBXN4-205ENST00000467065 VCAM1P19320 739 aa7.83□□□□□ -1.16
UBXN4-205ENST00000467065 PDE4AP27815 886 aa7.83□□□□□ -1.16
UBXN4-205ENST00000467065 USP14P54578 494 aa7.83□□□□□ -1.16
UBXN4-205ENST00000467065 UBXN2AP68543 259 aa7.83□□□□□ -1.16
UBXN4-205ENST00000467065 IRF5Q13568 498 aa7.83□□□□□ -1.16
UBXN4-205ENST00000467065 POTEEQ6S8J3 1075 aa7.83□□□□□ -1.16
UBXN4-205ENST00000467065 C12orf42Q96LP6 360 aa7.83□□□□□ -1.16
UBXN4-205ENST00000467065 KIAA1683Q9H0B3 1180 aa7.83□□□□□ -1.16
UBXN4-205ENST00000467065 RNF208Q9H0X6 261 aa7.83□□□□□ -1.16
UBXN4-205ENST00000467065 NAPBQ9H115 298 aa7.83□□□□□ -1.16
UBXN4-205ENST00000467065 ATP8A2Q9NTI2 1148 aa7.83□□□□□ -1.16
UBXN4-205ENST00000467065 MCM3APO60318 1980 aa7.82□□□□□ -1.16
UBXN4-205ENST00000467065 A0A1W2PRG0 241 aa7.82□□□□□ -1.16
UBXN4-205ENST00000467065 ZNF213O14771 459 aa7.82□□□□□ -1.16
UBXN4-205ENST00000467065 AKR1B1P15121 316 aa7.82□□□□□ -1.16
UBXN4-205ENST00000467065 CDK8P49336 464 aa7.82□□□□□ -1.16
UBXN4-205ENST00000467065 ERVK-9P63128 1117 aa7.82□□□□□ -1.16
UBXN4-205ENST00000467065 ERVK-24P63145 666 aa7.82□□□□□ -1.16
UBXN4-205ENST00000467065 FGD1P98174 961 aa7.82□□□□□ -1.16
UBXN4-205ENST00000467065 IMMTQ16891 758 aaKnown RBP7.82□□□□□ -1.16
UBXN4-205ENST00000467065 Q3C1V9 767 aa7.82□□□□□ -1.16
UBXN4-205ENST00000467065 C12orf60Q5U649 245 aa7.82□□□□□ -1.16
UBXN4-205ENST00000467065 TMEM179Q6ZVK1 233 aa7.82□□□□□ -1.16
UBXN4-205ENST00000467065 STK11IPQ8N1F8 1099 aa7.82□□□□□ -1.16
UBXN4-205ENST00000467065 OSBP2Q969R2 916 aa7.82□□□□□ -1.16
UBXN4-205ENST00000467065 PORCNQ9H237 461 aa7.82□□□□□ -1.16
UBXN4-205ENST00000467065 RPAP3Q9H6T3 665 aaPredicted RBP7.82□□□□□ -1.16
UBXN4-205ENST00000467065 MKNK2Q9HBH9 465 aa7.82□□□□□ -1.16
UBXN4-205ENST00000467065 TOMM22Q9NS69 142 aa7.82□□□□□ -1.16
UBXN4-205ENST00000467065 RBPJLQ9UBG7 517 aa7.82□□□□□ -1.16
UBXN4-205ENST00000467065 SWAP70Q9UH65 585 aa7.82□□□□□ -1.16
UBXN4-205ENST00000467065 RAD50Q92878 1312 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 SPDYE16A6NNV3 312 aaPredicted RBP7.81□□□□□ -1.16
UBXN4-205ENST00000467065 USP17L15C9J2P7 530 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 USP17L13C9JLJ4 530 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 USP17L11C9JVI0 530 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 USP17L18D6R9N7 530 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 USP17L22D6RA61 530 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 USP17L17D6RBQ6 530 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 USP17L19D6RCP7 530 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 USP17L20D6RJB6 530 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 M0R2C6 588 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 GPAA1O43292 621 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 CNMDO75829 334 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 GJB1P08034 283 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 CYP2B6P20813 491 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 CHMLP26374 656 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 GJA8P48165 433 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 ICA1Q05084 483 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 PDE4BQ07343 736 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 USP17L24Q0WX57 530 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 TRIM32Q13049 653 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 NMIQ13287 307 aaPredicted RBP7.81□□□□□ -1.16
UBXN4-205ENST00000467065 KIAA1755Q5JYT7 1200 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 WDR78Q5VTH9 848 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 GIMAP6Q6P9H5 292 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 CTR9Q6PD62 1173 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 CATSPERGQ6ZRH7 1159 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 C16orf86Q6ZW13 317 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 ZNF444Q8N0Y2 327 aaPredicted RBP7.81□□□□□ -1.16
UBXN4-205ENST00000467065 GPRC5AQ8NFJ5 357 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 PXYLP1Q8TE99 480 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 U2AF1L4Q8WU68 220 aaKnown RBP7.81□□□□□ -1.16
UBXN4-205ENST00000467065 TRIB2Q92519 343 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 STRBPQ96SI9 672 aaKnown RBP7.81□□□□□ -1.16
UBXN4-205ENST00000467065 TANGO6Q9C0B7 1094 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 RNF41Q9H4P4 317 aaPredicted RBP7.81□□□□□ -1.16
UBXN4-205ENST00000467065 CWC22Q9HCG8 908 aaKnown RBP7.81□□□□□ -1.16
UBXN4-205ENST00000467065 ARPP21Q9UBL0 812 aaPredicted RBP7.81□□□□□ -1.16
UBXN4-205ENST00000467065 DAXXQ9UER7 740 aaPredicted RBP7.81□□□□□ -1.16
UBXN4-205ENST00000467065 GJD2Q9UKL4 321 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 ROBO3Q96MS0 1386 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 DNAH12Q6ZR08 3092 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 SMCHD1A6NHR9 2005 aa7.81□□□□□ -1.16
UBXN4-205ENST00000467065 SALL3Q9BXA9 1300 aa7.8□□□□□ -1.16
UBXN4-205ENST00000467065 TRIOBPQ9H2D6 2365 aa7.8□□□□□ -1.16
UBXN4-205ENST00000467065 ERICH2A1L162 156 aa7.8□□□□□ -1.16
UBXN4-205ENST00000467065 GSG1L2A8MUP6 293 aa7.8□□□□□ -1.16
UBXN4-205ENST00000467065 MINDY4BA8MYZ0 360 aa7.8□□□□□ -1.16
UBXN4-205ENST00000467065 HMGCRP04035 888 aa7.8□□□□□ -1.16
UBXN4-205ENST00000467065 GSPT1P15170 499 aaKnown RBP7.8□□□□□ -1.16
UBXN4-205ENST00000467065 ATP2B2Q01814 1243 aa7.8□□□□□ -1.16
UBXN4-205ENST00000467065 KRT32Q14532 448 aa7.8□□□□□ -1.16
UBXN4-205ENST00000467065 SART3Q15020 963 aaKnown RBP7.8□□□□□ -1.16
UBXN4-205ENST00000467065 PPP4R3BQ5MIZ7 849 aa7.8□□□□□ -1.16
UBXN4-205ENST00000467065 ZMYM1Q5SVZ6 1142 aa7.8□□□□□ -1.16
UBXN4-205ENST00000467065 GPR142Q7Z601 462 aa7.8□□□□□ -1.16
UBXN4-205ENST00000467065 PLEKHH3Q7Z736 793 aa7.8□□□□□ -1.16
UBXN4-205ENST00000467065 RALYLQ86SE5 291 aaKnown RBP7.8□□□□□ -1.16
UBXN4-205ENST00000467065 SIAH1Q8IUQ4 282 aa7.8□□□□□ -1.16
UBXN4-205ENST00000467065 CCAR1Q8IX12 1150 aaKnown RBP7.8□□□□□ -1.16
UBXN4-205ENST00000467065 SPICE1Q8N0Z3 855 aa7.8□□□□□ -1.16
UBXN4-205ENST00000467065 NKX2-3Q8TAU0 364 aa7.8□□□□□ -1.16
UBXN4-205ENST00000467065 GTF3C2Q8WUA4 911 aaPredicted RBP7.8□□□□□ -1.16
UBXN4-205ENST00000467065 DEFB118Q96PH6 123 aa7.8□□□□□ -1.16
UBXN4-205ENST00000467065 SEC62Q99442 399 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms