RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 REXO1Q8N1G1 1221 aaKnown RBP5.5□□□□□ -1.53
GTF3C3-209ENST00000466862 DAGLBQ8NCG7 672 aa5.5□□□□□ -1.53
GTF3C3-209ENST00000466862 ENOX1Q8TC92 643 aaKnown RBP5.5□□□□□ -1.53
GTF3C3-209ENST00000466862 ATG4CQ96DT6 458 aa5.5□□□□□ -1.53
GTF3C3-209ENST00000466862 INTS4Q96HW7 963 aaKnown RBP5.5□□□□□ -1.53
GTF3C3-209ENST00000466862 SLC6A17Q9H1V8 727 aa5.5□□□□□ -1.53
GTF3C3-209ENST00000466862 CWC22Q9HCG8 908 aaKnown RBP5.5□□□□□ -1.53
GTF3C3-209ENST00000466862 ETV2O00321 342 aaPredicted RBP5.49□□□□□ -1.53
GTF3C3-209ENST00000466862 TNFRSF10CO14798 259 aa5.49□□□□□ -1.53
GTF3C3-209ENST00000466862 GBP1P32455 592 aa5.49□□□□□ -1.53
GTF3C3-209ENST00000466862 CHRNEQ04844 493 aa5.49□□□□□ -1.53
GTF3C3-209ENST00000466862 DUSP4Q13115 394 aa5.49□□□□□ -1.53
GTF3C3-209ENST00000466862 NLRC3Q7RTR2 1065 aa5.49□□□□□ -1.53
GTF3C3-209ENST00000466862 NLRX1Q86UT6 975 aa5.49□□□□□ -1.53
GTF3C3-209ENST00000466862 SLITRK4Q8IW52 837 aa5.49□□□□□ -1.53
GTF3C3-209ENST00000466862 OXR1Q8N573 874 aa5.49□□□□□ -1.53
GTF3C3-209ENST00000466862 USHBP1Q8N6Y0 703 aa5.49□□□□□ -1.53
GTF3C3-209ENST00000466862 DHX38Q92620 1227 aaKnown RBP5.49□□□□□ -1.53
GTF3C3-209ENST00000466862 TCTN2Q96GX1 697 aa5.49□□□□□ -1.53
GTF3C3-209ENST00000466862 SLC26A8Q96RN1 970 aa5.49□□□□□ -1.53
GTF3C3-209ENST00000466862 MCOLN1Q9GZU1 580 aa5.49□□□□□ -1.53
GTF3C3-209ENST00000466862 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.49□□□□□ -1.53
GTF3C3-209ENST00000466862 ANTXR1Q9H6X2 564 aa5.49□□□□□ -1.53
GTF3C3-209ENST00000466862 GGT7Q9UJ14 662 aa5.49□□□□□ -1.53
GTF3C3-209ENST00000466862 NFIBO00712 420 aa5.48□□□□□ -1.53
GTF3C3-209ENST00000466862 SIGLEC6O43699 453 aa5.48□□□□□ -1.53
GTF3C3-209ENST00000466862 PSPNO60542 156 aa5.48□□□□□ -1.53
GTF3C3-209ENST00000466862 USP2O75604 605 aaPredicted RBP5.48□□□□□ -1.53
GTF3C3-209ENST00000466862 PRAMEF1O95521 474 aa5.48□□□□□ -1.53
GTF3C3-209ENST00000466862 NME1P15531 152 aaKnown RBP5.48□□□□□ -1.53
GTF3C3-209ENST00000466862 CCNFP41002 786 aa5.48□□□□□ -1.53
GTF3C3-209ENST00000466862 SEZ6Q53EL9 994 aa5.48□□□□□ -1.53
GTF3C3-209ENST00000466862 ANKLE2Q86XL3 938 aa5.48□□□□□ -1.53
GTF3C3-209ENST00000466862 TMEM192Q8IY95 271 aa5.48□□□□□ -1.53
GTF3C3-209ENST00000466862 EAF1Q96JC9 268 aaPredicted RBP5.48□□□□□ -1.53
GTF3C3-209ENST00000466862 MAP6Q96JE9 813 aa5.48□□□□□ -1.53
GTF3C3-209ENST00000466862 NT5C1AQ9BXI3 368 aa5.48□□□□□ -1.53
GTF3C3-209ENST00000466862 NPIPB6E9PJ23 425 aa5.47□□□□□ -1.53
GTF3C3-209ENST00000466862 SHOXO15266 292 aa5.47□□□□□ -1.53
GTF3C3-209ENST00000466862 GALK1P51570 392 aa5.47□□□□□ -1.53
GTF3C3-209ENST00000466862 LINC00310P59036 64 aa5.47□□□□□ -1.53
GTF3C3-209ENST00000466862 APOBRQ0VD83 1088 aa5.47□□□□□ -1.53
GTF3C3-209ENST00000466862 MLECQ14165 292 aa5.47□□□□□ -1.53
GTF3C3-209ENST00000466862 SNX17Q15036 470 aa5.47□□□□□ -1.53
GTF3C3-209ENST00000466862 KCNA10Q16322 511 aa5.47□□□□□ -1.53
GTF3C3-209ENST00000466862 ATG14Q6ZNE5 492 aa5.47□□□□□ -1.53
GTF3C3-209ENST00000466862 ZNF655Q8N720 491 aaPredicted RBP5.47□□□□□ -1.53
GTF3C3-209ENST00000466862 LINC00116Q8NCU8 138 aa5.47□□□□□ -1.53
GTF3C3-209ENST00000466862 ZNF512BQ96KM6 892 aaPredicted RBP5.47□□□□□ -1.53
GTF3C3-209ENST00000466862 FOXP3Q9BZS1 431 aa5.47□□□□□ -1.53
GTF3C3-209ENST00000466862 PRDM14Q9GZV8 571 aa5.47□□□□□ -1.53
GTF3C3-209ENST00000466862 GCM1Q9NP62 436 aa5.47□□□□□ -1.53
GTF3C3-209ENST00000466862 GPR160Q9UJ42 338 aa5.47□□□□□ -1.53
GTF3C3-209ENST00000466862 NRDCO43847 1150 aa5.46□□□□□ -1.54
GTF3C3-209ENST00000466862 PEX10O60683 326 aa5.46□□□□□ -1.54
GTF3C3-209ENST00000466862 SEMA7AO75326 666 aa5.46□□□□□ -1.54
GTF3C3-209ENST00000466862 ACRP10323 421 aa5.46□□□□□ -1.54
GTF3C3-209ENST00000466862 ZNF16P17020 682 aaPredicted RBP5.46□□□□□ -1.54
GTF3C3-209ENST00000466862 CTSKP43235 329 aa5.46□□□□□ -1.54
GTF3C3-209ENST00000466862 KIR2DL1P43626 348 aaPredicted RBP5.46□□□□□ -1.54
GTF3C3-209ENST00000466862 KIR2DL2P43627 348 aaPredicted RBP5.46□□□□□ -1.54
GTF3C3-209ENST00000466862 FANCCQ00597 558 aa5.46□□□□□ -1.54
GTF3C3-209ENST00000466862 RAD51AP2Q09MP3 1159 aa5.46□□□□□ -1.54
GTF3C3-209ENST00000466862 CLEC16AQ2KHT3 1053 aa5.46□□□□□ -1.54
GTF3C3-209ENST00000466862 ZNF326Q5BKZ1 582 aaKnown RBP5.46□□□□□ -1.54
GTF3C3-209ENST00000466862 GK5Q6ZS86 529 aa5.46□□□□□ -1.54
GTF3C3-209ENST00000466862 AMIGO3Q86WK7 504 aa5.46□□□□□ -1.54
GTF3C3-209ENST00000466862 SIAH1Q8IUQ4 282 aa5.46□□□□□ -1.54
GTF3C3-209ENST00000466862 HHIPL1Q96JK4 782 aa5.46□□□□□ -1.54
GTF3C3-209ENST00000466862 ZNF552Q9H707 407 aaPredicted RBP5.46□□□□□ -1.54
GTF3C3-209ENST00000466862 TCFL5Q9UL49 500 aa5.46□□□□□ -1.54
GTF3C3-209ENST00000466862 ZNRF3Q9ULT6 936 aa5.46□□□□□ -1.54
GTF3C3-209ENST00000466862 MINPP1Q9UNW1 487 aa5.46□□□□□ -1.54
GTF3C3-209ENST00000466862 CLEC3AO75596 197 aa5.45□□□□□ -1.54
GTF3C3-209ENST00000466862 ZSCAN22P10073 491 aaPredicted RBP5.45□□□□□ -1.54
GTF3C3-209ENST00000466862 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
GTF3C3-209ENST00000466862 ZPBP2Q6X784 338 aa5.45□□□□□ -1.54
GTF3C3-209ENST00000466862 WAPLQ7Z5K2 1190 aa5.45□□□□□ -1.54
GTF3C3-209ENST00000466862 SPPL2CQ8IUH8 684 aa5.45□□□□□ -1.54
GTF3C3-209ENST00000466862 KIAA0825Q8IV33 1275 aa5.45□□□□□ -1.54
GTF3C3-209ENST00000466862 ZSCAN18Q8TBC5 510 aaPredicted RBP5.45□□□□□ -1.54
GTF3C3-209ENST00000466862 FCRL2Q96LA5 508 aaPredicted RBP5.45□□□□□ -1.54
GTF3C3-209ENST00000466862 SLC6A18Q96N87 628 aa5.45□□□□□ -1.54
GTF3C3-209ENST00000466862 SLC9A7Q96T83 725 aa5.45□□□□□ -1.54
GTF3C3-209ENST00000466862 SMG5Q9UPR3 1016 aaKnown RBP5.45□□□□□ -1.54
GTF3C3-209ENST00000466862 TEX51A0A1B0GUA7 166 aa5.44□□□□□ -1.54
GTF3C3-209ENST00000466862 TCAF2A6NFQ2 919 aa5.44□□□□□ -1.54
GTF3C3-209ENST00000466862 HRKO00198 91 aa5.44□□□□□ -1.54
GTF3C3-209ENST00000466862 ZNF205O95201 554 aa5.44□□□□□ -1.54
GTF3C3-209ENST00000466862 SYPP08247 313 aa5.44□□□□□ -1.54
GTF3C3-209ENST00000466862 TMEM253P0C7T8 217 aa5.44□□□□□ -1.54
GTF3C3-209ENST00000466862 ZNF165P49910 485 aa5.44□□□□□ -1.54
GTF3C3-209ENST00000466862 PCBP3P57721 371 aaKnown RBP5.44□□□□□ -1.54
GTF3C3-209ENST00000466862 DLG4P78352 724 aa5.44□□□□□ -1.54
GTF3C3-209ENST00000466862 ZNF605Q86T29 641 aa5.44□□□□□ -1.54
GTF3C3-209ENST00000466862 TAB3Q8N5C8 712 aaPredicted RBP5.44□□□□□ -1.54
GTF3C3-209ENST00000466862 NKD1Q969G9 470 aa5.44□□□□□ -1.54
GTF3C3-209ENST00000466862 PLCD4Q9BRC7 762 aa5.44□□□□□ -1.54
GTF3C3-209ENST00000466862 ERVK13-1Q9NX77 482 aa5.44□□□□□ -1.54
GTF3C3-209ENST00000466862 PRR13Q9NZ81 148 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms