RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 PRDM12Q9H4Q4 367 aa8.31□□□□□ -1.08
CLDN4-204ENST00000466411 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.31□□□□□ -1.08
CLDN4-204ENST00000466411 CDK5RAP2Q96SN8 1893 aa8.31□□□□□ -1.08
CLDN4-204ENST00000466411 NAV1Q8NEY1 1877 aa8.3□□□□□ -1.08
CLDN4-204ENST00000466411 PTPRZ1P23471 2315 aaPredicted RBP8.3□□□□□ -1.08
CLDN4-204ENST00000466411 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.3□□□□□ -1.08
CLDN4-204ENST00000466411 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.3□□□□□ -1.08
CLDN4-204ENST00000466411 ENTPD3O75355 529 aa8.3□□□□□ -1.08
CLDN4-204ENST00000466411 CCND3P30281 292 aaPredicted RBP8.3□□□□□ -1.08
CLDN4-204ENST00000466411 FAM110CQ1W6H9 321 aa8.3□□□□□ -1.08
CLDN4-204ENST00000466411 NOL9Q5SY16 702 aaKnown RBP8.3□□□□□ -1.08
CLDN4-204ENST00000466411 SH3RF1Q7Z6J0 888 aa8.3□□□□□ -1.08
CLDN4-204ENST00000466411 ANKRD13CQ8N6S4 541 aa8.3□□□□□ -1.08
CLDN4-204ENST00000466411 TIFAQ96CG3 184 aa8.3□□□□□ -1.08
CLDN4-204ENST00000466411 GAS2L1Q99501 681 aaPredicted RBP8.3□□□□□ -1.08
CLDN4-204ENST00000466411 FSD1Q9BTV5 496 aa8.3□□□□□ -1.08
CLDN4-204ENST00000466411 IDI2Q9BXS1 227 aa8.3□□□□□ -1.08
CLDN4-204ENST00000466411 CRNKL1Q9BZJ0 848 aaKnown RBP8.3□□□□□ -1.08
CLDN4-204ENST00000466411 KCNH6Q9H252 994 aa8.3□□□□□ -1.08
CLDN4-204ENST00000466411 DHX36Q9H2U1 1008 aaKnown RBP8.3□□□□□ -1.08
CLDN4-204ENST00000466411 CDHR5Q9HBB8 845 aa8.3□□□□□ -1.08
CLDN4-204ENST00000466411 SNRKQ9NRH2 765 aa8.3□□□□□ -1.08
CLDN4-204ENST00000466411 JAG2Q9Y219 1238 aa8.3□□□□□ -1.08
CLDN4-204ENST00000466411 PCDHGA10Q9Y5H3 936 aa8.3□□□□□ -1.08
CLDN4-204ENST00000466411 PHIPQ8WWQ0 1821 aa8.3□□□□□ -1.08
CLDN4-204ENST00000466411 BRWD1Q9NSI6 2320 aa8.3□□□□□ -1.08
CLDN4-204ENST00000466411 MAGEB6P1A0A0J9YX57 407 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 TRIM6-TRIM34B2RNG4 842 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 NUDT7P0C024 238 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 XRCC5P13010 732 aaKnown RBP8.29□□□□□ -1.08
CLDN4-204ENST00000466411 PDE6AP16499 860 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 CYP7A1P22680 504 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 ADD2P35612 726 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 BTDP43251 543 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 NT5C2P49902 561 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 CACNB3P54284 484 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 SNX17Q15036 470 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 DCAF15Q66K64 600 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 APOBEC3HQ6NTF7 200 aaKnown RBP8.29□□□□□ -1.08
CLDN4-204ENST00000466411 GIMAP6Q6P9H5 292 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 PI16Q6UXB8 463 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 MIGA2Q7L4E1 593 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 PLEKHM2Q8IWE5 1019 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 MAGEB6Q8N7X4 407 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 IL27Q8NEV9 243 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 RUFY2Q8WXA3 655 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 APPBP2Q92624 585 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 USP6NLQ92738 828 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 RNPC3Q96LT9 517 aaKnown RBP8.29□□□□□ -1.08
CLDN4-204ENST00000466411 BCL11AQ9H165 835 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 PDLIM7Q9NR12 457 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 ATP8A2Q9NTI2 1148 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 ATRNL1Q5VV63 1379 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 MYH1P12882 1939 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 RAD50Q92878 1312 aa8.29□□□□□ -1.08
CLDN4-204ENST00000466411 TRANK1O15050 2925 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 RNF113AO15541 343 aaKnown RBP8.28□□□□□ -1.08
CLDN4-204ENST00000466411 ST18O60284 1047 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 HLA-DOAP06340 250 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 PBX2P40425 430 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 PTGDRQ13258 359 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 DIXDC1Q155Q3 683 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 GRIK5Q16478 980 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 ARSIQ5FYB1 569 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 BMP2KLQ5H9B9 411 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 TTC22Q5TAA0 569 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 TBC1D9Q6ZT07 1266 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 FASTKD5Q7L8L6 764 aaKnown RBP8.28□□□□□ -1.08
CLDN4-204ENST00000466411 FAM151AQ8WW52 585 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 EPAS1Q99814 870 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 ZNF341Q9BYN7 854 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 NACAP1Q9BZK3 213 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 ZNF287Q9HBT7 754 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 PIH1D3Q9NQM4 214 aaKnown RBP8.28□□□□□ -1.08
CLDN4-204ENST00000466411 HELLSQ9NRZ9 838 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 DIAPH3Q9NSV4 1193 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 USP40Q9NVE5 1235 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 PRKAG2Q9UGJ0 569 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 AFG3L2Q9Y4W6 797 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 MYH8P13535 1937 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 LRRC37A2A6NM11 1700 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 ZNF532Q9HCE3 1301 aa8.28□□□□□ -1.08
CLDN4-204ENST00000466411 RASIP1Q5U651 963 aa8.27□□□□□ -1.09
CLDN4-204ENST00000466411 CDC42EP5Q6NZY7 148 aa8.27□□□□□ -1.09
CLDN4-204ENST00000466411 SLC39A5Q6ZMH5 540 aa8.27□□□□□ -1.09
CLDN4-204ENST00000466411 TEX11Q8IYF3 940 aa8.27□□□□□ -1.09
CLDN4-204ENST00000466411 KRI1Q8N9T8 703 aaKnown RBP8.27□□□□□ -1.09
CLDN4-204ENST00000466411 TRIM34Q9BYJ4 488 aa8.27□□□□□ -1.09
CLDN4-204ENST00000466411 PBX4Q9BYU1 374 aa8.27□□□□□ -1.09
CLDN4-204ENST00000466411 ZSWIM6Q9HCJ5 1215 aa8.27□□□□□ -1.09
CLDN4-204ENST00000466411 GINM1Q9NU53 330 aa8.27□□□□□ -1.09
CLDN4-204ENST00000466411 AATFQ9NY61 560 aaKnown RBP eCLIP8.27□□□□□ -1.09
CLDN4-204ENST00000466411 HERC5Q9UII4 1024 aaKnown RBP8.27□□□□□ -1.09
CLDN4-204ENST00000466411 BAHCC1Q9P281 2608 aa8.27□□□□□ -1.09
CLDN4-204ENST00000466411 ZMYM6O95789 1325 aa8.27□□□□□ -1.09
CLDN4-204ENST00000466411 TCRBV5S4A2TA0A5A2 114 aa8.26□□□□□ -1.09
CLDN4-204ENST00000466411 PHF20L1A8MW92 1017 aa8.26□□□□□ -1.09
CLDN4-204ENST00000466411 GRXCR1A8MXD5 290 aa8.26□□□□□ -1.09
CLDN4-204ENST00000466411 MAP3K7O43318 606 aa8.26□□□□□ -1.09
CLDN4-204ENST00000466411 SLC3A2P08195 630 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms