RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 SENP6Q9GZR1 1112 aaPredicted RBP24.97■■□□□ 1.59
CSPG5-204ENST00000465441 SLC5A4Q9NY91 659 aa24.97■■□□□ 1.59
CSPG5-204ENST00000465441 PATL2C9JE40 543 aaKnown RBP24.96■■□□□ 1.59
CSPG5-204ENST00000465441 SLC25A27O95847 323 aa24.96■■□□□ 1.59
CSPG5-204ENST00000465441 FAM83BQ5T0W9 1011 aa24.96■■□□□ 1.59
CSPG5-204ENST00000465441 EPB41L4AQ9HCS5 686 aaPredicted RBP24.96■■□□□ 1.59
CSPG5-204ENST00000465441 TTC41PQ6P2S7 1318 aa24.95■■□□□ 1.58
CSPG5-204ENST00000465441 SOX1O00570 391 aaPredicted RBP24.95■■□□□ 1.58
CSPG5-204ENST00000465441 APPP05067 770 aa24.95■■□□□ 1.58
CSPG5-204ENST00000465441 FCER1AP12319 257 aa24.95■■□□□ 1.58
CSPG5-204ENST00000465441 GNAT2P19087 354 aa24.95■■□□□ 1.58
CSPG5-204ENST00000465441 MAGEA10P43363 369 aaPredicted RBP24.95■■□□□ 1.58
CSPG5-204ENST00000465441 PRAMEF19Q5SWL8 479 aa24.95■■□□□ 1.58
CSPG5-204ENST00000465441 OTUD7AQ8TE49 926 aaPredicted RBP24.95■■□□□ 1.58
CSPG5-204ENST00000465441 NYAP2Q9P242 653 aa24.95■■□□□ 1.58
CSPG5-204ENST00000465441 PPP1R9AQ9ULJ8 1098 aa24.95■■□□□ 1.58
CSPG5-204ENST00000465441 A0A0G2JMZ2 1700 aa24.95■■□□□ 1.58
CSPG5-204ENST00000465441 VWA5AO00534 786 aa24.94■■□□□ 1.58
CSPG5-204ENST00000465441 STAT3P40763 770 aa24.94■■□□□ 1.58
CSPG5-204ENST00000465441 RIOX2Q8IUF8 465 aa24.94■■□□□ 1.58
CSPG5-204ENST00000465441 IFNL3Q8IZI9 196 aa24.94■■□□□ 1.58
CSPG5-204ENST00000465441 PI4K2BQ8TCG2 481 aa24.94■■□□□ 1.58
CSPG5-204ENST00000465441 MAML3Q96JK9 1138 aa24.94■■□□□ 1.58
CSPG5-204ENST00000465441 SEC62Q99442 399 aaKnown RBP24.94■■□□□ 1.58
CSPG5-204ENST00000465441 F5H6K3 240 aa24.93■■□□□ 1.58
CSPG5-204ENST00000465441 ERC2O15083 957 aa24.93■■□□□ 1.58
CSPG5-204ENST00000465441 TDO2P48775 406 aa24.93■■□□□ 1.58
CSPG5-204ENST00000465441 KLRC3Q07444 240 aa24.93■■□□□ 1.58
CSPG5-204ENST00000465441 LRRFIP1Q32MZ4 808 aaKnown RBP24.93■■□□□ 1.58
CSPG5-204ENST00000465441 ANO1Q5XXA6 986 aa24.93■■□□□ 1.58
CSPG5-204ENST00000465441 ZNF444Q8N0Y2 327 aaPredicted RBP24.93■■□□□ 1.58
CSPG5-204ENST00000465441 REPS2Q8NFH8 660 aa24.93■■□□□ 1.58
CSPG5-204ENST00000465441 NUP88Q99567 741 aaPredicted RBP24.93■■□□□ 1.58
CSPG5-204ENST00000465441 CLIP2Q9UDT6 1046 aa24.93■■□□□ 1.58
CSPG5-204ENST00000465441 RANBP2P49792 3224 aaKnown RBP24.93■■□□□ 1.58
CSPG5-204ENST00000465441 DNM1LO00429 736 aa24.92■■□□□ 1.58
CSPG5-204ENST00000465441 GJC2Q5T442 439 aaPredicted RBP24.92■■□□□ 1.58
CSPG5-204ENST00000465441 LRCH3Q96II8 777 aa24.92■■□□□ 1.58
CSPG5-204ENST00000465441 MMP19Q99542 508 aa24.92■■□□□ 1.58
CSPG5-204ENST00000465441 ZNF214Q9UL59 606 aaPredicted RBP24.92■■□□□ 1.58
CSPG5-204ENST00000465441 SZT2Q5T011 3432 aa24.92■■□□□ 1.58
CSPG5-204ENST00000465441 ZNFX1Q9P2E3 1918 aaKnown RBP24.92■■□□□ 1.58
CSPG5-204ENST00000465441 ROBO3Q96MS0 1386 aa24.92■■□□□ 1.58
CSPG5-204ENST00000465441 PARP14Q460N5 1801 aa24.91■■□□□ 1.58
CSPG5-204ENST00000465441 ZNF236Q9UL36 1845 aa24.91■■□□□ 1.58
CSPG5-204ENST00000465441 IGKV6D-41A0A0C4DH26 115 aa24.91■■□□□ 1.58
CSPG5-204ENST00000465441 SEPT4O43236 478 aa24.91■■□□□ 1.58
CSPG5-204ENST00000465441 PRDM1O75626 825 aa24.91■■□□□ 1.58
CSPG5-204ENST00000465441 ATN1P54259 1190 aaPredicted RBP24.91■■□□□ 1.58
CSPG5-204ENST00000465441 ARRDC4Q8NCT1 418 aa24.91■■□□□ 1.58
CSPG5-204ENST00000465441 NDUFB10O96000 172 aa24.9■■□□□ 1.58
CSPG5-204ENST00000465441 PGK2P07205 417 aa24.9■■□□□ 1.58
CSPG5-204ENST00000465441 FRMPD3Q5JV73 1810 aa24.9■■□□□ 1.58
CSPG5-204ENST00000465441 COL11A1P12107 1806 aaPredicted RBP24.89■■□□□ 1.58
CSPG5-204ENST00000465441 RRP1P56182 461 aaKnown RBP24.89■■□□□ 1.58
CSPG5-204ENST00000465441 ZNF792Q3KQV3 632 aa24.89■■□□□ 1.58
CSPG5-204ENST00000465441 MKL1Q969V6 931 aa24.89■■□□□ 1.58
CSPG5-204ENST00000465441 SLF1Q9BQI6 1058 aa24.89■■□□□ 1.58
CSPG5-204ENST00000465441 FSD1Q9BTV5 496 aa24.89■■□□□ 1.58
CSPG5-204ENST00000465441 UBE2OQ9C0C9 1292 aaKnown RBP24.89■■□□□ 1.58
CSPG5-204ENST00000465441 ZNF287Q9HBT7 754 aa24.89■■□□□ 1.58
CSPG5-204ENST00000465441 GREB1LQ9C091 1923 aaPredicted RBP24.88■■□□□ 1.57
CSPG5-204ENST00000465441 KCTD2Q14681 263 aa24.88■■□□□ 1.57
CSPG5-204ENST00000465441 ZMYM1Q5SVZ6 1142 aa24.88■■□□□ 1.57
CSPG5-204ENST00000465441 CEP95Q96GE4 821 aa24.88■■□□□ 1.57
CSPG5-204ENST00000465441 NACAP1Q9BZK3 213 aa24.88■■□□□ 1.57
CSPG5-204ENST00000465441 DIS3Q9Y2L1 958 aaKnown RBP24.88■■□□□ 1.57
CSPG5-204ENST00000465441 MX1P20591 662 aa24.87■■□□□ 1.57
CSPG5-204ENST00000465441 COPB2P35606 906 aa24.87■■□□□ 1.57
CSPG5-204ENST00000465441 MDM2Q00987 491 aaPredicted RBP24.87■■□□□ 1.57
CSPG5-204ENST00000465441 TDHQ8IZJ6 230 aa24.87■■□□□ 1.57
CSPG5-204ENST00000465441 PRPF38AQ8NAV1 312 aaKnown RBP24.87■■□□□ 1.57
CSPG5-204ENST00000465441 TINF2Q9BSI4 451 aa24.87■■□□□ 1.57
CSPG5-204ENST00000465441 MTMR4Q9NYA4 1195 aa24.87■■□□□ 1.57
CSPG5-204ENST00000465441 RIPK3Q9Y572 518 aa24.87■■□□□ 1.57
CSPG5-204ENST00000465441 ANKRD45Q5TZF3 282 aa24.86■■□□□ 1.57
CSPG5-204ENST00000465441 SLC39A5Q6ZMH5 540 aa24.86■■□□□ 1.57
CSPG5-204ENST00000465441 CRBNQ96SW2 442 aa24.86■■□□□ 1.57
CSPG5-204ENST00000465441 MYCNP04198 464 aaPredicted RBP24.85■■□□□ 1.57
CSPG5-204ENST00000465441 RTP1P59025 263 aa24.85■■□□□ 1.57
CSPG5-204ENST00000465441 LRIT3Q3SXY7 679 aa24.85■■□□□ 1.57
CSPG5-204ENST00000465441 FAM47AQ5JRC9 791 aa24.85■■□□□ 1.57
CSPG5-204ENST00000465441 NEDD1Q8NHV4 660 aa24.85■■□□□ 1.57
CSPG5-204ENST00000465441 TEX13BQ9BXU2 312 aa24.85■■□□□ 1.57
CSPG5-204ENST00000465441 NAPBQ9H115 298 aa24.85■■□□□ 1.57
CSPG5-204ENST00000465441 NRBP1Q9UHY1 535 aa24.85■■□□□ 1.57
CSPG5-204ENST00000465441 SALL3Q9BXA9 1300 aa24.85■■□□□ 1.57
CSPG5-204ENST00000465441 KBTBD13C9JR72 458 aa24.84■■□□□ 1.57
CSPG5-204ENST00000465441 ZBED4O75132 1171 aa24.84■■□□□ 1.57
CSPG5-204ENST00000465441 TTLL1O95922 423 aa24.84■■□□□ 1.57
CSPG5-204ENST00000465441 TAL1P17542 331 aaPredicted RBP24.84■■□□□ 1.57
CSPG5-204ENST00000465441 TFAP4Q01664 338 aa24.84■■□□□ 1.57
CSPG5-204ENST00000465441 PDE4BQ07343 736 aa24.84■■□□□ 1.57
CSPG5-204ENST00000465441 PPARAQ07869 468 aa24.84■■□□□ 1.57
CSPG5-204ENST00000465441 LRRC41Q15345 812 aa24.84■■□□□ 1.57
CSPG5-204ENST00000465441 SNRNP48Q6IEG0 339 aaKnown RBP24.84■■□□□ 1.57
CSPG5-204ENST00000465441 CPXCR1Q8N123 301 aa24.84■■□□□ 1.57
CSPG5-204ENST00000465441 SMCHD1A6NHR9 2005 aa24.84■■□□□ 1.57
CSPG5-204ENST00000465441 TSPY3P0CV98 308 aa24.83■■□□□ 1.57
CSPG5-204ENST00000465441 TSPY8P0CW00 308 aa24.83■■□□□ 1.57
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