RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	KCT2	Q8NC54	265 aa		7.6	□□□□□ -1.19
CACNA1C-223	ENST00000465278	ATG4C	Q96DT6	458 aa		7.6	□□□□□ -1.19
CACNA1C-223	ENST00000465278	SHD	Q96IW2	340 aa		7.6	□□□□□ -1.19
CACNA1C-223	ENST00000465278	FAM83C	Q9BQN1	747 aa		7.6	□□□□□ -1.19
CACNA1C-223	ENST00000465278	FOXQ1	Q9C009	403 aa		7.6	□□□□□ -1.19
CACNA1C-223	ENST00000465278	ADAM30	Q9UKF2	790 aa		7.6	□□□□□ -1.19
CACNA1C-223	ENST00000465278	RAX	Q9Y2V3	346 aa		7.6	□□□□□ -1.19
CACNA1C-223	ENST00000465278	ABCC3	O15438	1527 aa		7.6	□□□□□ -1.19
CACNA1C-223	ENST00000465278	KIDINS220	Q9ULH0	1771 aa		7.6	□□□□□ -1.19
CACNA1C-223	ENST00000465278	FAM86C2P	A6NEL3	165 aa		7.59	□□□□□ -1.19
CACNA1C-223	ENST00000465278	GIPR	P48546	466 aa		7.59	□□□□□ -1.19
CACNA1C-223	ENST00000465278	R3HDM1	Q15032	1099 aa	Known RBP	7.59	□□□□□ -1.19
CACNA1C-223	ENST00000465278	SEZ6L2	Q6UXD5	910 aa		7.59	□□□□□ -1.19
CACNA1C-223	ENST00000465278	RIN3	Q8TB24	985 aa		7.59	□□□□□ -1.19
CACNA1C-223	ENST00000465278	SPOCK3	Q9BQ16	436 aa		7.59	□□□□□ -1.19
CACNA1C-223	ENST00000465278	C7orf69	Q9H7B7	122 aa		7.59	□□□□□ -1.19
CACNA1C-223	ENST00000465278	C1GALT1	Q9NS00	363 aa		7.59	□□□□□ -1.19
CACNA1C-223	ENST00000465278	PLCH2	O75038	1416 aa		7.59	□□□□□ -1.19
CACNA1C-223	ENST00000465278	WDR90	Q96KV7	1748 aa		7.58	□□□□□ -1.2
CACNA1C-223	ENST00000465278	TNS1	Q9HBL0	1735 aa	Known RBP	7.58	□□□□□ -1.2
CACNA1C-223	ENST00000465278	CST3	P01034	146 aa	Predicted RBP	7.58	□□□□□ -1.2
CACNA1C-223	ENST00000465278	IMPDH2	P12268	514 aa		7.58	□□□□□ -1.2
CACNA1C-223	ENST00000465278	ADM	P35318	185 aa		7.58	□□□□□ -1.2
CACNA1C-223	ENST00000465278	PPP2R5E	Q16537	467 aa		7.58	□□□□□ -1.2
CACNA1C-223	ENST00000465278	LRRFIP1	Q32MZ4	808 aa	Known RBP	7.58	□□□□□ -1.2
CACNA1C-223	ENST00000465278	OVOS1	Q6IE37	1185 aa		7.58	□□□□□ -1.2
CACNA1C-223	ENST00000465278	PRR23C	Q6ZRP0	262 aa		7.58	□□□□□ -1.2
CACNA1C-223	ENST00000465278	ARMCX6	Q7L4S7	300 aa		7.58	□□□□□ -1.2
CACNA1C-223	ENST00000465278	MRPL41	Q8IXM3	137 aa	Known RBP	7.58	□□□□□ -1.2
CACNA1C-223	ENST00000465278	FBXL6	Q8N531	539 aa		7.58	□□□□□ -1.2
CACNA1C-223	ENST00000465278	FAM169B	Q8N8A8	192 aa		7.58	□□□□□ -1.2
CACNA1C-223	ENST00000465278	KIF2C	Q99661	725 aa		7.58	□□□□□ -1.2
CACNA1C-223	ENST00000465278	ZNF408	Q9H9D4	720 aa		7.58	□□□□□ -1.2
CACNA1C-223	ENST00000465278	GMIP	Q9P107	970 aa		7.58	□□□□□ -1.2
CACNA1C-223	ENST00000465278	UGGT1	Q9NYU2	1555 aa		7.58	□□□□□ -1.2
CACNA1C-223	ENST00000465278	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	7.58	□□□□□ -1.2
CACNA1C-223	ENST00000465278	MSTN	O14793	375 aa		7.57	□□□□□ -1.2
CACNA1C-223	ENST00000465278	POLR2B	P30876	1174 aa	Known RBP	7.57	□□□□□ -1.2
CACNA1C-223	ENST00000465278	YARS	P54577	528 aa	Known RBP	7.57	□□□□□ -1.2
CACNA1C-223	ENST00000465278	SF3A1	Q15459	793 aa	Known RBP	7.57	□□□□□ -1.2
CACNA1C-223	ENST00000465278	LSR	Q86X29	649 aa	Predicted RBP	7.57	□□□□□ -1.2
CACNA1C-223	ENST00000465278	PHACTR4	Q8IZ21	702 aa		7.57	□□□□□ -1.2
CACNA1C-223	ENST00000465278	BAHD1	Q8TBE0	780 aa	Predicted RBP	7.57	□□□□□ -1.2
CACNA1C-223	ENST00000465278	TMEM40	Q8WWA1	233 aa		7.57	□□□□□ -1.2
CACNA1C-223	ENST00000465278	TBC1D32	Q96NH3	1257 aa		7.57	□□□□□ -1.2
CACNA1C-223	ENST00000465278	ATRN	O75882	1429 aa		7.57	□□□□□ -1.2
CACNA1C-223	ENST00000465278	MARF1	Q9Y4F3	1742 aa	Known RBP	7.57	□□□□□ -1.2
CACNA1C-223	ENST00000465278	RREB1	Q92766	1687 aa		7.57	□□□□□ -1.2
CACNA1C-223	ENST00000465278	MLH3	Q9UHC1	1453 aa		7.56	□□□□□ -1.2
CACNA1C-223	ENST00000465278	PCNT	O95613	3336 aa		7.56	□□□□□ -1.2
CACNA1C-223	ENST00000465278	SMAD7	O15105	426 aa	Known RBP	7.56	□□□□□ -1.2
CACNA1C-223	ENST00000465278	LEFTY1	O75610	366 aa		7.56	□□□□□ -1.2
CACNA1C-223	ENST00000465278	STK10	O94804	968 aa	Known RBP	7.56	□□□□□ -1.2
CACNA1C-223	ENST00000465278	LRIG2	O94898	1065 aa		7.56	□□□□□ -1.2
CACNA1C-223	ENST00000465278	PROC	P04070	461 aa		7.56	□□□□□ -1.2
CACNA1C-223	ENST00000465278	RAG1	P15918	1043 aa		7.56	□□□□□ -1.2
CACNA1C-223	ENST00000465278	NLRC3	Q7RTR2	1065 aa		7.56	□□□□□ -1.2
CACNA1C-223	ENST00000465278	CDH24	Q86UP0	819 aa		7.56	□□□□□ -1.2
CACNA1C-223	ENST00000465278	RBBP8NL	Q8NC74	664 aa	Predicted RBP	7.56	□□□□□ -1.2
CACNA1C-223	ENST00000465278	MFSD14A	Q96MC6	490 aa		7.56	□□□□□ -1.2
CACNA1C-223	ENST00000465278	PSMG3-AS1	Q96PY0	264 aa		7.56	□□□□□ -1.2
CACNA1C-223	ENST00000465278	SLC9A7	Q96T83	725 aa		7.56	□□□□□ -1.2
CACNA1C-223	ENST00000465278	CNNM2	Q9H8M5	875 aa		7.56	□□□□□ -1.2
CACNA1C-223	ENST00000465278	STRIP2	Q9ULQ0	834 aa		7.56	□□□□□ -1.2
CACNA1C-223	ENST00000465278	TMEM94	Q12767	1356 aa		7.56	□□□□□ -1.2
CACNA1C-223	ENST00000465278	MYOM1	P52179	1685 aa		7.55	□□□□□ -1.2
CACNA1C-223	ENST00000465278	IGSF3	O75054	1194 aa		7.55	□□□□□ -1.2
CACNA1C-223	ENST00000465278	SLITRK5	O94991	958 aa		7.55	□□□□□ -1.2
CACNA1C-223	ENST00000465278	NME1	P15531	152 aa	Known RBP	7.55	□□□□□ -1.2
CACNA1C-223	ENST00000465278	GBP1	P32455	592 aa		7.55	□□□□□ -1.2
CACNA1C-223	ENST00000465278	CAP2	P40123	477 aa		7.55	□□□□□ -1.2
CACNA1C-223	ENST00000465278	CDCP2	Q5VXM1	449 aa		7.55	□□□□□ -1.2
CACNA1C-223	ENST00000465278	TOP6BL	Q8N6T0	577 aa		7.55	□□□□□ -1.2
CACNA1C-223	ENST00000465278	MFSD2A	Q8NA29	543 aa		7.55	□□□□□ -1.2
CACNA1C-223	ENST00000465278	DNAJC2	Q99543	621 aa	Known RBP	7.55	□□□□□ -1.2
CACNA1C-223	ENST00000465278	MIPEP	Q99797	713 aa		7.55	□□□□□ -1.2
CACNA1C-223	ENST00000465278	TNKS2	Q9H2K2	1166 aa		7.55	□□□□□ -1.2
CACNA1C-223	ENST00000465278	PRDM10	Q9NQV6	1147 aa		7.55	□□□□□ -1.2
CACNA1C-223	ENST00000465278	FAM135A	Q9P2D6	1515 aa		7.55	□□□□□ -1.2
CACNA1C-223	ENST00000465278	AATK	Q6ZMQ8	1374 aa		7.55	□□□□□ -1.2
CACNA1C-223	ENST00000465278	NUP188	Q5SRE5	1749 aa		7.55	□□□□□ -1.2
CACNA1C-223	ENST00000465278	GOLGA3	Q08378	1498 aa		7.55	□□□□□ -1.2
CACNA1C-223	ENST00000465278	CNTNAP4	Q9C0A0	1308 aa		7.54	□□□□□ -1.2
CACNA1C-223	ENST00000465278	FAM87A	P0C7U9	286 aa		7.54	□□□□□ -1.2
CACNA1C-223	ENST00000465278	ACR	P10323	421 aa		7.54	□□□□□ -1.2
CACNA1C-223	ENST00000465278	ZYX	Q15942	572 aa	Known RBP	7.54	□□□□□ -1.2
CACNA1C-223	ENST00000465278	LETMD1	Q6P1Q0	360 aa		7.54	□□□□□ -1.2
CACNA1C-223	ENST00000465278	ANKS3	Q6ZW76	656 aa		7.54	□□□□□ -1.2
CACNA1C-223	ENST00000465278	SLFN12	Q8IYM2	578 aa		7.54	□□□□□ -1.2
CACNA1C-223	ENST00000465278	CCDC74B	Q96LY2	380 aa		7.54	□□□□□ -1.2
CACNA1C-223	ENST00000465278	NRK	Q7Z2Y5	1582 aa		7.54	□□□□□ -1.2
CACNA1C-223	ENST00000465278	PRDM15	P57071	1507 aa	Predicted RBP	7.53	□□□□□ -1.2
CACNA1C-223	ENST00000465278	FAM170B	A6NMN3	283 aa		7.53	□□□□□ -1.2
CACNA1C-223	ENST00000465278	FURIN	P09958	794 aa		7.53	□□□□□ -1.2
CACNA1C-223	ENST00000465278	RSPO4	Q2I0M5	234 aa	Predicted RBP	7.53	□□□□□ -1.2
CACNA1C-223	ENST00000465278	NKAPL	Q5M9Q1	402 aa		7.53	□□□□□ -1.2
CACNA1C-223	ENST00000465278	RNF43	Q68DV7	783 aa		7.53	□□□□□ -1.2
CACNA1C-223	ENST00000465278	OGFOD3	Q6PK18	319 aa		7.53	□□□□□ -1.2
CACNA1C-223	ENST00000465278	UNC5A	Q6ZN44	842 aa		7.53	□□□□□ -1.2
CACNA1C-223	ENST00000465278	PMFBP1	Q8TBY8	1022 aa		7.53	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms