RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 LBX2Q6XYB7 198 aa20.65■□□□□ 0.9
CPSF4-209ENST00000465132 SWAP70Q9UH65 585 aa20.65■□□□□ 0.9
CPSF4-209ENST00000465132 BAZ2AQ9UIF9 1905 aaKnown RBP20.65■□□□□ 0.9
CPSF4-209ENST00000465132 PFASO15067 1338 aa20.64■□□□□ 0.89
CPSF4-209ENST00000465132 USP17L12C9JPN9 530 aa20.64■□□□□ 0.89
CPSF4-209ENST00000465132 USP17L21D6R901 530 aa20.64■□□□□ 0.89
CPSF4-209ENST00000465132 PCP11498 1178 aaKnown RBP20.64■□□□□ 0.89
CPSF4-209ENST00000465132 BMP8BP34820 402 aa20.64■□□□□ 0.89
CPSF4-209ENST00000465132 ZNF213O14771 459 aa20.63■□□□□ 0.89
CPSF4-209ENST00000465132 COL6A1P12109 1028 aa20.63■□□□□ 0.89
CPSF4-209ENST00000465132 MCCP23508 829 aa20.63■□□□□ 0.89
CPSF4-209ENST00000465132 PDE4BQ07343 736 aa20.63■□□□□ 0.89
CPSF4-209ENST00000465132 SEPT2Q15019 361 aa20.63■□□□□ 0.89
CPSF4-209ENST00000465132 CTR9Q6PD62 1173 aa20.63■□□□□ 0.89
CPSF4-209ENST00000465132 MAP4K1Q92918 833 aa20.63■□□□□ 0.89
CPSF4-209ENST00000465132 RNF41Q9H4P4 317 aaPredicted RBP20.63■□□□□ 0.89
CPSF4-209ENST00000465132 RPAP3Q9H6T3 665 aaPredicted RBP20.63■□□□□ 0.89
CPSF4-209ENST00000465132 UPF2Q9HAU5 1272 aaKnown RBP20.63■□□□□ 0.89
CPSF4-209ENST00000465132 BTBD7Q9P203 1132 aa20.63■□□□□ 0.89
CPSF4-209ENST00000465132 SLC15A5A6NIM6 579 aa20.62■□□□□ 0.89
CPSF4-209ENST00000465132 SPDYE16A6NNV3 312 aaPredicted RBP20.62■□□□□ 0.89
CPSF4-209ENST00000465132 MINDY4BA8MYZ0 360 aa20.62■□□□□ 0.89
CPSF4-209ENST00000465132 FGAP02671 866 aa20.62■□□□□ 0.89
CPSF4-209ENST00000465132 SYN1P17600 705 aa20.62■□□□□ 0.89
CPSF4-209ENST00000465132 PTPREP23469 700 aa20.62■□□□□ 0.89
CPSF4-209ENST00000465132 EVX2Q03828 476 aa20.62■□□□□ 0.89
CPSF4-209ENST00000465132 C12orf60Q5U649 245 aa20.62■□□□□ 0.89
CPSF4-209ENST00000465132 WDR78Q5VTH9 848 aa20.62■□□□□ 0.89
CPSF4-209ENST00000465132 LRCH3Q96II8 777 aa20.62■□□□□ 0.89
CPSF4-209ENST00000465132 VPS53Q5VIR6 699 aa20.61■□□□□ 0.89
CPSF4-209ENST00000465132 FLRT1Q9NZU1 646 aa20.61■□□□□ 0.89
CPSF4-209ENST00000465132 ANAPC4Q9UJX5 808 aa20.61■□□□□ 0.89
CPSF4-209ENST00000465132 A0A1W2PRG0 241 aa20.6■□□□□ 0.89
CPSF4-209ENST00000465132 HOXC6P09630 235 aa20.6■□□□□ 0.89
CPSF4-209ENST00000465132 MAGEA10P43363 369 aaPredicted RBP20.6■□□□□ 0.89
CPSF4-209ENST00000465132 PPARAQ07869 468 aa20.6■□□□□ 0.89
CPSF4-209ENST00000465132 GRB14Q14449 540 aa20.6■□□□□ 0.89
CPSF4-209ENST00000465132 MFSD14CQ5VZR4 134 aa20.6■□□□□ 0.89
CPSF4-209ENST00000465132 EPB41L4AQ9HCS5 686 aaPredicted RBP20.6■□□□□ 0.89
CPSF4-209ENST00000465132 MYH8P13535 1937 aa20.59■□□□□ 0.89
CPSF4-209ENST00000465132 MPHOSPH10O00566 681 aaKnown RBP20.59■□□□□ 0.89
CPSF4-209ENST00000465132 LSG1Q9H089 658 aaKnown RBP20.59■□□□□ 0.89
CPSF4-209ENST00000465132 MKNK2Q9HBH9 465 aa20.59■□□□□ 0.89
CPSF4-209ENST00000465132 IVNS1ABPQ9Y6Y0 642 aa20.59■□□□□ 0.89
CPSF4-209ENST00000465132 ROBO3Q96MS0 1386 aa20.59■□□□□ 0.89
CPSF4-209ENST00000465132 LAMA4Q16363 1823 aa20.58■□□□□ 0.89
CPSF4-209ENST00000465132 CYP2D6P10635 497 aa20.58■□□□□ 0.89
CPSF4-209ENST00000465132 ATP2B2Q01814 1243 aa20.58■□□□□ 0.89
CPSF4-209ENST00000465132 TRDNQ13061 729 aa20.58■□□□□ 0.89
CPSF4-209ENST00000465132 COG2Q14746 738 aa20.58■□□□□ 0.89
CPSF4-209ENST00000465132 SLC44A5Q8NCS7 719 aa20.58■□□□□ 0.89
CPSF4-209ENST00000465132 CCDC17Q96LX7 622 aa20.58■□□□□ 0.89
CPSF4-209ENST00000465132 CNNM2Q9H8M5 875 aa20.58■□□□□ 0.89
CPSF4-209ENST00000465132 LRRC26Q2I0M4 334 aa20.57■□□□□ 0.88
CPSF4-209ENST00000465132 PPP4R3BQ5MIZ7 849 aa20.57■□□□□ 0.88
CPSF4-209ENST00000465132 MFSD6Q6ZSS7 791 aa20.57■□□□□ 0.88
CPSF4-209ENST00000465132 TMEM179Q6ZVK1 233 aa20.57■□□□□ 0.88
CPSF4-209ENST00000465132 C16orf86Q6ZW13 317 aa20.57■□□□□ 0.88
CPSF4-209ENST00000465132 NPLOC4Q8TAT6 608 aa20.57■□□□□ 0.88
CPSF4-209ENST00000465132 HOXC10Q9NYD6 342 aa20.57■□□□□ 0.88
CPSF4-209ENST00000465132 RBM8AQ9Y5S9 174 aaKnown RBP20.57■□□□□ 0.88
CPSF4-209ENST00000465132 IGHA2P01877 340 aa20.56■□□□□ 0.88
CPSF4-209ENST00000465132 PTH1RQ03431 593 aa20.56■□□□□ 0.88
CPSF4-209ENST00000465132 KRT32Q14532 448 aa20.56■□□□□ 0.88
CPSF4-209ENST00000465132 ZNF444Q8N0Y2 327 aaPredicted RBP20.56■□□□□ 0.88
CPSF4-209ENST00000465132 MOV10L1Q9BXT6 1211 aaKnown RBP20.56■□□□□ 0.88
CPSF4-209ENST00000465132 TANGO6Q9C0B7 1094 aa20.56■□□□□ 0.88
CPSF4-209ENST00000465132 IL25Q9H293 177 aa20.56■□□□□ 0.88
CPSF4-209ENST00000465132 DDX20Q9UHI6 824 aaKnown RBP20.56■□□□□ 0.88
CPSF4-209ENST00000465132 FOXP2O15409 715 aa20.55■□□□□ 0.88
CPSF4-209ENST00000465132 MSCO60682 206 aa20.55■□□□□ 0.88
CPSF4-209ENST00000465132 CYP2C19P33261 490 aa20.55■□□□□ 0.88
CPSF4-209ENST00000465132 LRIT3Q3SXY7 679 aa20.55■□□□□ 0.88
CPSF4-209ENST00000465132 KIAA1755Q5JYT7 1200 aa20.55■□□□□ 0.88
CPSF4-209ENST00000465132 GPR153Q6NV75 609 aa20.55■□□□□ 0.88
CPSF4-209ENST00000465132 TDHQ8IZJ6 230 aa20.55■□□□□ 0.88
CPSF4-209ENST00000465132 DYNLL2Q96FJ2 89 aa20.55■□□□□ 0.88
CPSF4-209ENST00000465132 KRT23Q9C075 422 aa20.55■□□□□ 0.88
CPSF4-209ENST00000465132 UBE2OQ9C0C9 1292 aaKnown RBP20.55■□□□□ 0.88
CPSF4-209ENST00000465132 LAMA3Q16787 3333 aa20.54■□□□□ 0.88
CPSF4-209ENST00000465132 STRNO43815 780 aa20.54■□□□□ 0.88
CPSF4-209ENST00000465132 CNGA1P29973 690 aa20.54■□□□□ 0.88
CPSF4-209ENST00000465132 CDK8P49336 464 aa20.54■□□□□ 0.88
CPSF4-209ENST00000465132 C8orf34Q49A92 452 aa20.54■□□□□ 0.88
CPSF4-209ENST00000465132 AKNAD1Q5T1N1 836 aa20.54■□□□□ 0.88
CPSF4-209ENST00000465132 SIAH1Q8IUQ4 282 aa20.54■□□□□ 0.88
CPSF4-209ENST00000465132 SHCBP1Q8NEM2 672 aa20.54■□□□□ 0.88
CPSF4-209ENST00000465132 TRPV1Q8NER1 839 aa20.54■□□□□ 0.88
CPSF4-209ENST00000465132 STAG1Q8WVM7 1258 aa20.54■□□□□ 0.88
CPSF4-209ENST00000465132 LPAR1Q92633 364 aa20.54■□□□□ 0.88
CPSF4-209ENST00000465132 SPATC1LQ9H0A9 340 aa20.54■□□□□ 0.88
CPSF4-209ENST00000465132 ORC4O43929 436 aa20.53■□□□□ 0.88
CPSF4-209ENST00000465132 AKR1B1P15121 316 aa20.53■□□□□ 0.88
CPSF4-209ENST00000465132 ADORA2AP29274 412 aa20.53■□□□□ 0.88
CPSF4-209ENST00000465132 CCDC178Q5BJE1 867 aa20.53■□□□□ 0.88
CPSF4-209ENST00000465132 RALYLQ86SE5 291 aaKnown RBP20.53■□□□□ 0.88
CPSF4-209ENST00000465132 DPP9Q86TI2 863 aa20.53■□□□□ 0.88
CPSF4-209ENST00000465132 CLEC10AQ8IUN9 316 aa20.53■□□□□ 0.88
CPSF4-209ENST00000465132 MB21D1Q8N884 522 aa20.53■□□□□ 0.88
CPSF4-209ENST00000465132 ESR2Q92731 530 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms