RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 PHF24Q9UPV7 400 aa20.85■□□□□ 0.93
HMGN1-210ENST00000464078 SMCHD1A6NHR9 2005 aa20.85■□□□□ 0.93
HMGN1-210ENST00000464078 EYSQ5T1H1 3165 aa20.85■□□□□ 0.93
HMGN1-210ENST00000464078 VCANP13611 3396 aa20.84■□□□□ 0.93
HMGN1-210ENST00000464078 HMMRO75330 724 aa20.84■□□□□ 0.93
HMGN1-210ENST00000464078 PRAMEF19Q5SWL8 479 aa20.84■□□□□ 0.93
HMGN1-210ENST00000464078 C9orf50Q5SZB4 431 aa20.84■□□□□ 0.93
HMGN1-210ENST00000464078 C16orf86Q6ZW13 317 aa20.84■□□□□ 0.93
HMGN1-210ENST00000464078 RIOX2Q8IUF8 465 aa20.84■□□□□ 0.93
HMGN1-210ENST00000464078 COL25A1Q9BXS0 654 aaPredicted RBP20.84■□□□□ 0.93
HMGN1-210ENST00000464078 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.84■□□□□ 0.93
HMGN1-210ENST00000464078 PRDM5Q9NQX1 630 aaPredicted RBP20.84■□□□□ 0.93
HMGN1-210ENST00000464078 DIS3Q9Y2L1 958 aaKnown RBP20.84■□□□□ 0.93
HMGN1-210ENST00000464078 CDH23Q9H251 3354 aa20.84■□□□□ 0.93
HMGN1-210ENST00000464078 ZBED9Q6R2W3 1325 aa20.83■□□□□ 0.93
HMGN1-210ENST00000464078 PRKAB2O43741 272 aa20.83■□□□□ 0.93
HMGN1-210ENST00000464078 MS4A1P11836 297 aa20.83■□□□□ 0.93
HMGN1-210ENST00000464078 COPB2P35606 906 aa20.83■□□□□ 0.93
HMGN1-210ENST00000464078 CDK8P49336 464 aa20.83■□□□□ 0.93
HMGN1-210ENST00000464078 SMAD3P84022 425 aaKnown RBP20.83■□□□□ 0.93
HMGN1-210ENST00000464078 AMOTL1Q8IY63 956 aa20.83■□□□□ 0.93
HMGN1-210ENST00000464078 BADQ92934 168 aa20.83■□□□□ 0.93
HMGN1-210ENST00000464078 FAM161BQ96MY7 647 aa20.83■□□□□ 0.93
HMGN1-210ENST00000464078 KANSL2Q9H9L4 492 aa20.83■□□□□ 0.93
HMGN1-210ENST00000464078 TRIM43BA6NCK2 446 aa20.82■□□□□ 0.92
HMGN1-210ENST00000464078 RAB11FIP3O75154 756 aa20.82■□□□□ 0.92
HMGN1-210ENST00000464078 RARBP10826 455 aa20.82■□□□□ 0.92
HMGN1-210ENST00000464078 ATP5JP18859 108 aa20.82■□□□□ 0.92
HMGN1-210ENST00000464078 UBE3CQ15386 1083 aa20.82■□□□□ 0.92
HMGN1-210ENST00000464078 SIRT2Q8IXJ6 389 aa20.82■□□□□ 0.92
HMGN1-210ENST00000464078 TRIM43Q96BQ3 446 aaPredicted RBP20.82■□□□□ 0.92
HMGN1-210ENST00000464078 MMP19Q99542 508 aa20.82■□□□□ 0.92
HMGN1-210ENST00000464078 TINF2Q9BSI4 451 aa20.82■□□□□ 0.92
HMGN1-210ENST00000464078 XPNPEP3Q9NQH7 507 aa20.82■□□□□ 0.92
HMGN1-210ENST00000464078 ZNF214Q9UL59 606 aaPredicted RBP20.82■□□□□ 0.92
HMGN1-210ENST00000464078 PRUNE2Q8WUY3 3088 aa20.81■□□□□ 0.92
HMGN1-210ENST00000464078 CYP2D7A0A087X1C5 515 aa20.81■□□□□ 0.92
HMGN1-210ENST00000464078 USP17L12C9JPN9 530 aa20.81■□□□□ 0.92
HMGN1-210ENST00000464078 USP17L21D6R901 530 aa20.81■□□□□ 0.92
HMGN1-210ENST00000464078 SMIM22K7EJ46 135 aa20.81■□□□□ 0.92
HMGN1-210ENST00000464078 VWA5AO00534 786 aa20.81■□□□□ 0.92
HMGN1-210ENST00000464078 EEF2P13639 858 aaKnown RBP20.81■□□□□ 0.92
HMGN1-210ENST00000464078 TLE2Q04725 743 aa20.81■□□□□ 0.92
HMGN1-210ENST00000464078 KCTD2Q14681 263 aa20.81■□□□□ 0.92
HMGN1-210ENST00000464078 ZNF792Q3KQV3 632 aa20.81■□□□□ 0.92
HMGN1-210ENST00000464078 SH3RF1Q7Z6J0 888 aa20.81■□□□□ 0.92
HMGN1-210ENST00000464078 REPS2Q8NFH8 660 aa20.81■□□□□ 0.92
HMGN1-210ENST00000464078 FERMT2Q96AC1 680 aa20.81■□□□□ 0.92
HMGN1-210ENST00000464078 CDX2Q99626 313 aaPredicted RBP20.81■□□□□ 0.92
HMGN1-210ENST00000464078 HAUS7Q99871 368 aa20.81■□□□□ 0.92
HMGN1-210ENST00000464078 GOPCQ9HD26 462 aa20.81■□□□□ 0.92
HMGN1-210ENST00000464078 FBXO28Q9NVF7 368 aa20.81■□□□□ 0.92
HMGN1-210ENST00000464078 PPP1R9AQ9ULJ8 1098 aa20.81■□□□□ 0.92
HMGN1-210ENST00000464078 SPTBN5Q9NRC6 3674 aaKnown RBP20.8■□□□□ 0.92
HMGN1-210ENST00000464078 APBB1O00213 710 aa20.8■□□□□ 0.92
HMGN1-210ENST00000464078 MYCNP04198 464 aaPredicted RBP20.8■□□□□ 0.92
HMGN1-210ENST00000464078 SLFNL1Q499Z3 407 aa20.8■□□□□ 0.92
HMGN1-210ENST00000464078 RNF180Q86T96 592 aa20.8■□□□□ 0.92
HMGN1-210ENST00000464078 DDRGK1Q96HY6 314 aa20.8■□□□□ 0.92
HMGN1-210ENST00000464078 SEMA6BQ9H3T3 888 aa20.8■□□□□ 0.92
HMGN1-210ENST00000464078 ZBTB40Q9NUA8 1239 aa20.8■□□□□ 0.92
HMGN1-210ENST00000464078 TACC3Q9Y6A5 838 aa20.8■□□□□ 0.92
HMGN1-210ENST00000464078 TMEM265A0A087WTH1 108 aa20.79■□□□□ 0.92
HMGN1-210ENST00000464078 PGK2P07205 417 aa20.79■□□□□ 0.92
HMGN1-210ENST00000464078 CLTBP09497 229 aa20.79■□□□□ 0.92
HMGN1-210ENST00000464078 STAT3P40763 770 aa20.79■□□□□ 0.92
HMGN1-210ENST00000464078 MSL3Q8N5Y2 521 aaKnown RBP20.79■□□□□ 0.92
HMGN1-210ENST00000464078 BOLA2Q9H3K6 86 aa20.79■□□□□ 0.92
HMGN1-210ENST00000464078 DDX19BQ9UMR2 479 aa20.79■□□□□ 0.92
HMGN1-210ENST00000464078 A0A1W2PQ45 241 aaPredicted RBP20.78■□□□□ 0.92
HMGN1-210ENST00000464078 A0A1W2PQY0 241 aa20.78■□□□□ 0.92
HMGN1-210ENST00000464078 KIAA0355O15063 1070 aa20.78■□□□□ 0.92
HMGN1-210ENST00000464078 ZNF865P0CJ78 1059 aaPredicted RBP20.78■□□□□ 0.92
HMGN1-210ENST00000464078 AKR1A1P14550 325 aa20.78■□□□□ 0.92
HMGN1-210ENST00000464078 TTYH1Q9H313 450 aaPredicted RBP20.78■□□□□ 0.92
HMGN1-210ENST00000464078 ARPP21Q9UBL0 812 aaPredicted RBP20.78■□□□□ 0.92
HMGN1-210ENST00000464078 ADAMTS4O75173 837 aa20.77■□□□□ 0.92
HMGN1-210ENST00000464078 TAL1P17542 331 aaPredicted RBP20.77■□□□□ 0.92
HMGN1-210ENST00000464078 ITGB8P26012 769 aa20.77■□□□□ 0.92
HMGN1-210ENST00000464078 CTR9Q6PD62 1173 aa20.77■□□□□ 0.92
HMGN1-210ENST00000464078 SAMD1Q6SPF0 538 aaPredicted RBP20.77■□□□□ 0.92
HMGN1-210ENST00000464078 MAFAQ8NHW3 353 aaPredicted RBP20.77■□□□□ 0.92
HMGN1-210ENST00000464078 TSEN34Q9BSV6 310 aaKnown RBP20.77■□□□□ 0.92
HMGN1-210ENST00000464078 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.77■□□□□ 0.92
HMGN1-210ENST00000464078 CNPY2Q9Y2B0 182 aa20.77■□□□□ 0.92
HMGN1-210ENST00000464078 SLC4A4Q9Y6R1 1079 aa20.77■□□□□ 0.92
HMGN1-210ENST00000464078 PGK1P00558 417 aa20.76■□□□□ 0.91
HMGN1-210ENST00000464078 FAM83BQ5T0W9 1011 aa20.76■□□□□ 0.91
HMGN1-210ENST00000464078 ZSCAN25Q6NSZ9 544 aa20.76■□□□□ 0.91
HMGN1-210ENST00000464078 ANKRD33Q7Z3H0 272 aa20.76■□□□□ 0.91
HMGN1-210ENST00000464078 TOX2Q96NM4 488 aa20.76■□□□□ 0.91
HMGN1-210ENST00000464078 TEX13BQ9BXU2 312 aa20.76■□□□□ 0.91
HMGN1-210ENST00000464078 SYNGAP1Q96PV0 1343 aa20.76■□□□□ 0.91
HMGN1-210ENST00000464078 CHGBP05060 677 aa20.75■□□□□ 0.91
HMGN1-210ENST00000464078 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.75■□□□□ 0.91
HMGN1-210ENST00000464078 SLF1Q9BQI6 1058 aa20.75■□□□□ 0.91
HMGN1-210ENST00000464078 PUS7LQ9H0K6 701 aaKnown RBP20.75■□□□□ 0.91
HMGN1-210ENST00000464078 ATP2A1O14983 1001 aa20.74■□□□□ 0.91
HMGN1-210ENST00000464078 EPHB4P54760 987 aa20.74■□□□□ 0.91
HMGN1-210ENST00000464078 SBK1Q52WX2 424 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms