RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 EVI5O60447 810 aa24.52■■□□□ 1.52
PDLIM4-205ENST00000463615 SLC25A27O95847 323 aa24.52■■□□□ 1.52
PDLIM4-205ENST00000463615 APPP05067 770 aa24.52■■□□□ 1.52
PDLIM4-205ENST00000463615 ADORA2AP29274 412 aa24.52■■□□□ 1.52
PDLIM4-205ENST00000463615 ATP2B2Q01814 1243 aa24.52■■□□□ 1.52
PDLIM4-205ENST00000463615 MKL1Q969V6 931 aa24.52■■□□□ 1.52
PDLIM4-205ENST00000463615 COL6A1P12109 1028 aa24.51■■□□□ 1.51
PDLIM4-205ENST00000463615 PDE1AP54750 535 aa24.51■■□□□ 1.51
PDLIM4-205ENST00000463615 TMEM132BQ14DG7 1078 aa24.51■■□□□ 1.51
PDLIM4-205ENST00000463615 EVI5LQ96CN4 794 aa24.51■■□□□ 1.51
PDLIM4-205ENST00000463615 C11orf49Q9H6J7 331 aa24.51■■□□□ 1.51
PDLIM4-205ENST00000463615 PCDH10Q9P2E7 1040 aa24.51■■□□□ 1.51
PDLIM4-205ENST00000463615 TRIOBPQ9H2D6 2365 aa24.5■■□□□ 1.51
PDLIM4-205ENST00000463615 VWA5AO00534 786 aa24.5■■□□□ 1.51
PDLIM4-205ENST00000463615 MSCO60682 206 aa24.5■■□□□ 1.51
PDLIM4-205ENST00000463615 DPP9Q86TI2 863 aa24.5■■□□□ 1.51
PDLIM4-205ENST00000463615 RIOX2Q8IUF8 465 aa24.5■■□□□ 1.51
PDLIM4-205ENST00000463615 ZNF444Q8N0Y2 327 aaPredicted RBP24.5■■□□□ 1.51
PDLIM4-205ENST00000463615 REPS2Q8NFH8 660 aa24.5■■□□□ 1.51
PDLIM4-205ENST00000463615 FBXO28Q9NVF7 368 aa24.5■■□□□ 1.51
PDLIM4-205ENST00000463615 SLC5A4Q9NY91 659 aa24.5■■□□□ 1.51
PDLIM4-205ENST00000463615 ALPK3Q96L96 1907 aa24.5■■□□□ 1.51
PDLIM4-205ENST00000463615 F5H6K3 240 aa24.49■■□□□ 1.51
PDLIM4-205ENST00000463615 FOXP2O15409 715 aa24.49■■□□□ 1.51
PDLIM4-205ENST00000463615 COBLO75128 1261 aa24.49■■□□□ 1.51
PDLIM4-205ENST00000463615 COPB2P35606 906 aa24.49■■□□□ 1.51
PDLIM4-205ENST00000463615 FXR1P51114 621 aaKnown RBP eCLIP24.49■■□□□ 1.51
PDLIM4-205ENST00000463615 KLRC3Q07444 240 aa24.49■■□□□ 1.51
PDLIM4-205ENST00000463615 FAM83BQ5T0W9 1011 aa24.49■■□□□ 1.51
PDLIM4-205ENST00000463615 CHRDL2Q6WN34 429 aa24.49■■□□□ 1.51
PDLIM4-205ENST00000463615 SMC5Q8IY18 1101 aa24.49■■□□□ 1.51
PDLIM4-205ENST00000463615 NEDD1Q8NHV4 660 aa24.49■■□□□ 1.51
PDLIM4-205ENST00000463615 NAPBQ9H115 298 aa24.49■■□□□ 1.51
PDLIM4-205ENST00000463615 MTMR4Q9NYA4 1195 aa24.49■■□□□ 1.51
PDLIM4-205ENST00000463615 ZNF214Q9UL59 606 aaPredicted RBP24.49■■□□□ 1.51
PDLIM4-205ENST00000463615 SLC3A2P08195 630 aaKnown RBP24.48■■□□□ 1.51
PDLIM4-205ENST00000463615 CYBAP13498 195 aa24.48■■□□□ 1.51
PDLIM4-205ENST00000463615 PDE4BQ07343 736 aa24.48■■□□□ 1.51
PDLIM4-205ENST00000463615 PPARAQ07869 468 aa24.48■■□□□ 1.51
PDLIM4-205ENST00000463615 NCAPG2Q86XI2 1143 aa24.48■■□□□ 1.51
PDLIM4-205ENST00000463615 PFASO15067 1338 aa24.47■■□□□ 1.51
PDLIM4-205ENST00000463615 PRDM1O75626 825 aa24.47■■□□□ 1.51
PDLIM4-205ENST00000463615 NDUFB10O96000 172 aa24.47■■□□□ 1.51
PDLIM4-205ENST00000463615 FCER1AP12319 257 aa24.47■■□□□ 1.51
PDLIM4-205ENST00000463615 CYP2C19P33261 490 aa24.47■■□□□ 1.51
PDLIM4-205ENST00000463615 PLS1Q14651 629 aa24.47■■□□□ 1.51
PDLIM4-205ENST00000463615 STK11IPQ8N1F8 1099 aa24.47■■□□□ 1.51
PDLIM4-205ENST00000463615 CEP95Q96GE4 821 aa24.47■■□□□ 1.51
PDLIM4-205ENST00000463615 SLF1Q9BQI6 1058 aa24.47■■□□□ 1.51
PDLIM4-205ENST00000463615 CLIP2Q9UDT6 1046 aa24.47■■□□□ 1.51
PDLIM4-205ENST00000463615 DDX20Q9UHI6 824 aaKnown RBP24.47■■□□□ 1.51
PDLIM4-205ENST00000463615 COL11A1P12107 1806 aaPredicted RBP24.47■■□□□ 1.51
PDLIM4-205ENST00000463615 ATP2A1O14983 1001 aa24.46■■□□□ 1.51
PDLIM4-205ENST00000463615 TTLL1O95922 423 aa24.46■■□□□ 1.51
PDLIM4-205ENST00000463615 STAT3P40763 770 aa24.46■■□□□ 1.51
PDLIM4-205ENST00000463615 GMCL1P1Q8NEA9 526 aa24.46■■□□□ 1.51
PDLIM4-205ENST00000463615 TRPV1Q8NER1 839 aa24.46■■□□□ 1.51
PDLIM4-205ENST00000463615 HELLSQ9NRZ9 838 aa24.46■■□□□ 1.51
PDLIM4-205ENST00000463615 RBM27Q9P2N5 1060 aaKnown RBP24.46■■□□□ 1.51
PDLIM4-205ENST00000463615 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.46■■□□□ 1.51
PDLIM4-205ENST00000463615 FRMPD3Q5JV73 1810 aa24.45■■□□□ 1.5
PDLIM4-205ENST00000463615 A0A1W2PPC1 479 aa24.45■■□□□ 1.5
PDLIM4-205ENST00000463615 ALX1Q15699 326 aa24.45■■□□□ 1.5
PDLIM4-205ENST00000463615 PRPF38AQ8NAV1 312 aaKnown RBP24.45■■□□□ 1.5
PDLIM4-205ENST00000463615 YTHDC1Q96MU7 727 aaKnown RBP24.45■■□□□ 1.5
PDLIM4-205ENST00000463615 RWDD1Q9H446 243 aaPredicted RBP24.45■■□□□ 1.5
PDLIM4-205ENST00000463615 ANAPC4Q9UJX5 808 aa24.45■■□□□ 1.5
PDLIM4-205ENST00000463615 DIS3Q9Y2L1 958 aaKnown RBP24.45■■□□□ 1.5
PDLIM4-205ENST00000463615 RANBP2P49792 3224 aaKnown RBP24.44■■□□□ 1.5
PDLIM4-205ENST00000463615 MAML3Q96JK9 1138 aa24.44■■□□□ 1.5
PDLIM4-205ENST00000463615 NRBP1Q9UHY1 535 aa24.44■■□□□ 1.5
PDLIM4-205ENST00000463615 TSPY3P0CV98 308 aa24.43■■□□□ 1.5
PDLIM4-205ENST00000463615 TSPY8P0CW00 308 aa24.43■■□□□ 1.5
PDLIM4-205ENST00000463615 PPP4R3BQ5MIZ7 849 aa24.43■■□□□ 1.5
PDLIM4-205ENST00000463615 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.43■■□□□ 1.5
PDLIM4-205ENST00000463615 NUP88Q99567 741 aaPredicted RBP24.43■■□□□ 1.5
PDLIM4-205ENST00000463615 TEX13BQ9BXU2 312 aa24.43■■□□□ 1.5
PDLIM4-205ENST00000463615 MYH4Q9Y623 1939 aa24.43■■□□□ 1.5
PDLIM4-205ENST00000463615 RAD21O60216 631 aa24.42■■□□□ 1.5
PDLIM4-205ENST00000463615 FGRP09769 529 aa24.42■■□□□ 1.5
PDLIM4-205ENST00000463615 TFAP4Q01664 338 aa24.42■■□□□ 1.5
PDLIM4-205ENST00000463615 CCDC129Q6ZRS4 1044 aa24.42■■□□□ 1.5
PDLIM4-205ENST00000463615 MMP19Q99542 508 aa24.42■■□□□ 1.5
PDLIM4-205ENST00000463615 FEM1BQ9UK73 627 aa24.42■■□□□ 1.5
PDLIM4-205ENST00000463615 ZNFX1Q9P2E3 1918 aaKnown RBP24.41■■□□□ 1.5
PDLIM4-205ENST00000463615 SEPT4O43236 478 aa24.41■■□□□ 1.5
PDLIM4-205ENST00000463615 KCTD2Q14681 263 aa24.41■■□□□ 1.5
PDLIM4-205ENST00000463615 ZNF792Q3KQV3 632 aa24.41■■□□□ 1.5
PDLIM4-205ENST00000463615 SAMD1Q6SPF0 538 aaPredicted RBP24.41■■□□□ 1.5
PDLIM4-205ENST00000463615 LNPKQ9C0E8 428 aa24.41■■□□□ 1.5
PDLIM4-205ENST00000463615 OSBPL3Q9H4L5 887 aa24.41■■□□□ 1.5
PDLIM4-205ENST00000463615 ZMYM6O95789 1325 aa24.4■■□□□ 1.5
PDLIM4-205ENST00000463615 DNM1LO00429 736 aa24.4■■□□□ 1.5
PDLIM4-205ENST00000463615 FDX1P10109 184 aa24.4■■□□□ 1.5
PDLIM4-205ENST00000463615 CNGA1P29973 690 aa24.4■■□□□ 1.5
PDLIM4-205ENST00000463615 NOVP48745 357 aa24.4■■□□□ 1.5
PDLIM4-205ENST00000463615 MCMDC2Q4G0Z9 681 aa24.4■■□□□ 1.5
PDLIM4-205ENST00000463615 FAM47AQ5JRC9 791 aa24.4■■□□□ 1.5
PDLIM4-205ENST00000463615 VPS53Q5VIR6 699 aa24.4■■□□□ 1.5
PDLIM4-205ENST00000463615 C7orf61Q8IZ16 206 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms