RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 SPATC1LQ9H0A9 340 aa13.51□□□□□ -0.25
SSR3-202ENST00000463503 PRDM12Q9H4Q4 367 aa13.51□□□□□ -0.25
SSR3-202ENST00000463503 LRP2BPQ9P2M1 347 aa13.51□□□□□ -0.25
SSR3-202ENST00000463503 GREB1LQ9C091 1923 aaPredicted RBP13.51□□□□□ -0.25
SSR3-202ENST00000463503 GRXCR1A8MXD5 290 aa13.5□□□□□ -0.25
SSR3-202ENST00000463503 STRNO43815 780 aa13.5□□□□□ -0.25
SSR3-202ENST00000463503 HLA-DOAP06340 250 aa13.5□□□□□ -0.25
SSR3-202ENST00000463503 ERCC3P19447 782 aa13.5□□□□□ -0.25
SSR3-202ENST00000463503 GUCY1A2P33402 732 aa13.5□□□□□ -0.25
SSR3-202ENST00000463503 MRPS5P82675 430 aaKnown RBP13.5□□□□□ -0.25
SSR3-202ENST00000463503 G3BP1Q13283 466 aaKnown RBP eCLIP13.5□□□□□ -0.25
SSR3-202ENST00000463503 ANKRD33Q7Z3H0 272 aa13.5□□□□□ -0.25
SSR3-202ENST00000463503 SMC5Q8IY18 1101 aa13.5□□□□□ -0.25
SSR3-202ENST00000463503 NECAB3Q96P71 396 aaPredicted RBP13.5□□□□□ -0.25
SSR3-202ENST00000463503 EHD4Q9H223 541 aa13.5□□□□□ -0.25
SSR3-202ENST00000463503 GPR108Q9NPR9 543 aa13.5□□□□□ -0.25
SSR3-202ENST00000463503 XPNPEP3Q9NQH7 507 aa13.5□□□□□ -0.25
SSR3-202ENST00000463503 PPP4R2Q9NY27 417 aa13.5□□□□□ -0.25
SSR3-202ENST00000463503 TBX21Q9UL17 535 aa13.5□□□□□ -0.25
SSR3-202ENST00000463503 PTPRSQ13332 1948 aa13.5□□□□□ -0.25
SSR3-202ENST00000463503 ADAMTS4O75173 837 aa13.49□□□□□ -0.25
SSR3-202ENST00000463503 SURF6O75683 361 aaKnown RBP13.49□□□□□ -0.25
SSR3-202ENST00000463503 PGK1P00558 417 aa13.49□□□□□ -0.25
SSR3-202ENST00000463503 DYNLL1P63167 89 aaKnown RBP13.49□□□□□ -0.25
SSR3-202ENST00000463503 RAB3GAP1Q15042 981 aa13.49□□□□□ -0.25
SSR3-202ENST00000463503 C16orf59Q7L2K0 433 aa13.49□□□□□ -0.25
SSR3-202ENST00000463503 LENG1Q96BZ8 264 aaPredicted RBP13.49□□□□□ -0.25
SSR3-202ENST00000463503 TMEM39AQ9NV64 488 aa13.49□□□□□ -0.25
SSR3-202ENST00000463503 SCN5AQ14524 2016 aa13.48□□□□□ -0.25
SSR3-202ENST00000463503 A0A1W2PRG0 241 aa13.48□□□□□ -0.25
SSR3-202ENST00000463503 IGHDP01880 384 aa13.48□□□□□ -0.25
SSR3-202ENST00000463503 CYP2E1P05181 493 aaPredicted RBP13.48□□□□□ -0.25
SSR3-202ENST00000463503 UQCRFS1P1P0C7P4 283 aa13.48□□□□□ -0.25
SSR3-202ENST00000463503 SHMT1P34896 483 aa13.48□□□□□ -0.25
SSR3-202ENST00000463503 ABRAQ8N0Z2 381 aa13.48□□□□□ -0.25
SSR3-202ENST00000463503 KIF1BPQ96EK5 621 aa13.48□□□□□ -0.25
SSR3-202ENST00000463503 TOX2Q96NM4 488 aa13.48□□□□□ -0.25
SSR3-202ENST00000463503 SNRKQ9NRH2 765 aa13.48□□□□□ -0.25
SSR3-202ENST00000463503 SERPINB13Q9UIV8 391 aa13.48□□□□□ -0.25
SSR3-202ENST00000463503 ARIH1Q9Y4X5 557 aaPredicted RBP13.48□□□□□ -0.25
SSR3-202ENST00000463503 MYH7P12883 1935 aa13.48□□□□□ -0.25
SSR3-202ENST00000463503 TANC1Q9C0D5 1861 aa13.48□□□□□ -0.25
SSR3-202ENST00000463503 TIMP1P01033 207 aa13.47□□□□□ -0.25
SSR3-202ENST00000463503 RARBP10826 455 aa13.47□□□□□ -0.25
SSR3-202ENST00000463503 CCDC85BQ15834 202 aaPredicted RBP13.47□□□□□ -0.25
SSR3-202ENST00000463503 ABCB5Q2M3G0 1257 aa13.47□□□□□ -0.25
SSR3-202ENST00000463503 KIAA1755Q5JYT7 1200 aa13.47□□□□□ -0.25
SSR3-202ENST00000463503 TMEM240Q5SV17 173 aa13.47□□□□□ -0.25
SSR3-202ENST00000463503 GORABQ5T7V8 394 aa13.47□□□□□ -0.25
SSR3-202ENST00000463503 RNF180Q86T96 592 aa13.47□□□□□ -0.25
SSR3-202ENST00000463503 SLC44A5Q8NCS7 719 aa13.47□□□□□ -0.25
SSR3-202ENST00000463503 NRBP1Q9UHY1 535 aa13.47□□□□□ -0.25
SSR3-202ENST00000463503 EXOC6BQ9Y2D4 811 aa13.47□□□□□ -0.25
SSR3-202ENST00000463503 SYNRGQ9UMZ2 1314 aa13.46□□□□□ -0.25
SSR3-202ENST00000463503 BMP1P13497 986 aa13.46□□□□□ -0.25
SSR3-202ENST00000463503 TAL1P17542 331 aaPredicted RBP13.46□□□□□ -0.25
SSR3-202ENST00000463503 COG2Q14746 738 aa13.46□□□□□ -0.25
SSR3-202ENST00000463503 CERKLQ49MI3 558 aaPredicted RBP13.46□□□□□ -0.25
SSR3-202ENST00000463503 MFSD5Q6N075 450 aa13.46□□□□□ -0.25
SSR3-202ENST00000463503 RHPN1Q8TCX5 695 aa13.46□□□□□ -0.25
SSR3-202ENST00000463503 C1QTNF1Q9BXJ1 281 aa13.46□□□□□ -0.25
SSR3-202ENST00000463503 MROH8Q9H579 483 aa13.46□□□□□ -0.25
SSR3-202ENST00000463503 PIH1D3Q9NQM4 214 aaKnown RBP13.46□□□□□ -0.25
SSR3-202ENST00000463503 CXXC1Q9P0U4 656 aaPredicted RBP13.46□□□□□ -0.25
SSR3-202ENST00000463503 MYH4Q9Y623 1939 aa13.46□□□□□ -0.25
SSR3-202ENST00000463503 TRIOO75962 3097 aa13.45□□□□□ -0.26
SSR3-202ENST00000463503 ZNF865P0CJ78 1059 aaPredicted RBP13.45□□□□□ -0.26
SSR3-202ENST00000463503 ACLYP53396 1101 aa13.45□□□□□ -0.26
SSR3-202ENST00000463503 TFF2Q03403 129 aa13.45□□□□□ -0.26
SSR3-202ENST00000463503 CCSAPQ6IQ19 270 aaPredicted RBP13.45□□□□□ -0.26
SSR3-202ENST00000463503 CENPQQ7L2Z9 268 aaPredicted RBP13.45□□□□□ -0.26
SSR3-202ENST00000463503 PIAS4Q8N2W9 510 aaPredicted RBP13.45□□□□□ -0.26
SSR3-202ENST00000463503 LRRCC1Q9C099 1032 aa13.45□□□□□ -0.26
SSR3-202ENST00000463503 TANGO6Q9C0B7 1094 aa13.45□□□□□ -0.26
SSR3-202ENST00000463503 SLC5A4Q9NY91 659 aa13.45□□□□□ -0.26
SSR3-202ENST00000463503 LCTP09848 1927 aa13.45□□□□□ -0.26
SSR3-202ENST00000463503 CSF2RAP15509 400 aa13.44□□□□□ -0.26
SSR3-202ENST00000463503 PLCD1P51178 756 aa13.44□□□□□ -0.26
SSR3-202ENST00000463503 EVX2Q03828 476 aa13.44□□□□□ -0.26
SSR3-202ENST00000463503 GABPAQ06546 454 aa13.44□□□□□ -0.26
SSR3-202ENST00000463503 PPIGQ13427 754 aaKnown RBP eCLIP13.44□□□□□ -0.26
SSR3-202ENST00000463503 OS9Q13438 667 aaPredicted RBP13.44□□□□□ -0.26
SSR3-202ENST00000463503 SEPT2Q15019 361 aa13.44□□□□□ -0.26
SSR3-202ENST00000463503 CCDC129Q6ZRS4 1044 aa13.44□□□□□ -0.26
SSR3-202ENST00000463503 NCAPG2Q86XI2 1143 aa13.44□□□□□ -0.26
SSR3-202ENST00000463503 MB21D1Q8N884 522 aa13.44□□□□□ -0.26
SSR3-202ENST00000463503 MIGA1Q8NAN2 632 aa13.44□□□□□ -0.26
SSR3-202ENST00000463503 KLHDC9Q8NEP7 349 aa13.44□□□□□ -0.26
SSR3-202ENST00000463503 ATG4CQ96DT6 458 aa13.44□□□□□ -0.26
SSR3-202ENST00000463503 CCDC136Q96JN2 1154 aa13.44□□□□□ -0.26
SSR3-202ENST00000463503 TINF2Q9BSI4 451 aa13.44□□□□□ -0.26
SSR3-202ENST00000463503 TSEN34Q9BSV6 310 aaKnown RBP13.44□□□□□ -0.26
SSR3-202ENST00000463503 LRFN3Q9BTN0 628 aa13.44□□□□□ -0.26
SSR3-202ENST00000463503 STARD7Q9NQZ5 370 aa13.44□□□□□ -0.26
SSR3-202ENST00000463503 HOXC10Q9NYD6 342 aa13.44□□□□□ -0.26
SSR3-202ENST00000463503 YBX2Q9Y2T7 364 aaKnown RBP13.44□□□□□ -0.26
SSR3-202ENST00000463503 MYADML2A6NDP7 307 aa13.43□□□□□ -0.26
SSR3-202ENST00000463503 DCDC2CA8MYV0 355 aa13.43□□□□□ -0.26
SSR3-202ENST00000463503 IGSF3O75054 1194 aa13.43□□□□□ -0.26
SSR3-202ENST00000463503 FCER1AP12319 257 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms