RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 SLFNL1Q499Z3 407 aa25.02■■□□□ 1.6
CPSF7-209ENST00000463244 FAM47AQ5JRC9 791 aa25.02■■□□□ 1.6
CPSF7-209ENST00000463244 C9orf50Q5SZB4 431 aa25.02■■□□□ 1.6
CPSF7-209ENST00000463244 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.02■■□□□ 1.6
CPSF7-209ENST00000463244 CCDC17Q96LX7 622 aa25.02■■□□□ 1.6
CPSF7-209ENST00000463244 PDLIM7Q9NR12 457 aa25.02■■□□□ 1.6
CPSF7-209ENST00000463244 PAG1Q9NWQ8 432 aa25.02■■□□□ 1.6
CPSF7-209ENST00000463244 ADAMTS5Q9UNA0 930 aa25.02■■□□□ 1.6
CPSF7-209ENST00000463244 SMIM22K7EJ46 135 aa25.01■■□□□ 1.59
CPSF7-209ENST00000463244 CDK8P49336 464 aa25.01■■□□□ 1.59
CPSF7-209ENST00000463244 C12orf60Q5U649 245 aa25.01■■□□□ 1.59
CPSF7-209ENST00000463244 RPAP2Q8IXW5 612 aaPredicted RBP25.01■■□□□ 1.59
CPSF7-209ENST00000463244 BADQ92934 168 aa25.01■■□□□ 1.59
CPSF7-209ENST00000463244 FERMT2Q96AC1 680 aa25.01■■□□□ 1.59
CPSF7-209ENST00000463244 COL25A1Q9BXS0 654 aaPredicted RBP25.01■■□□□ 1.59
CPSF7-209ENST00000463244 NRBP1Q9UHY1 535 aa25.01■■□□□ 1.59
CPSF7-209ENST00000463244 CYP2D7A0A087X1C5 515 aa25■■□□□ 1.59
CPSF7-209ENST00000463244 SAMD1Q6SPF0 538 aaPredicted RBP25■■□□□ 1.59
CPSF7-209ENST00000463244 C16orf86Q6ZW13 317 aa25■■□□□ 1.59
CPSF7-209ENST00000463244 TRIM43BA6NCK2 446 aa24.99■■□□□ 1.59
CPSF7-209ENST00000463244 HMMRO75330 724 aa24.99■■□□□ 1.59
CPSF7-209ENST00000463244 SH3RF1Q7Z6J0 888 aa24.99■■□□□ 1.59
CPSF7-209ENST00000463244 RIOX2Q8IUF8 465 aa24.99■■□□□ 1.59
CPSF7-209ENST00000463244 SIRT2Q8IXJ6 389 aa24.99■■□□□ 1.59
CPSF7-209ENST00000463244 TRIM43Q96BQ3 446 aaPredicted RBP24.99■■□□□ 1.59
CPSF7-209ENST00000463244 BOLA2Q9H3K6 86 aa24.99■■□□□ 1.59
CPSF7-209ENST00000463244 PHF24Q9UPV7 400 aa24.99■■□□□ 1.59
CPSF7-209ENST00000463244 USP17L12C9JPN9 530 aa24.98■■□□□ 1.59
CPSF7-209ENST00000463244 USP17L21D6R901 530 aa24.98■■□□□ 1.59
CPSF7-209ENST00000463244 EEF2P13639 858 aaKnown RBP24.98■■□□□ 1.59
CPSF7-209ENST00000463244 ATP5JP18859 108 aa24.98■■□□□ 1.59
CPSF7-209ENST00000463244 AMOTL1Q8IY63 956 aa24.98■■□□□ 1.59
CPSF7-209ENST00000463244 MMP19Q99542 508 aa24.98■■□□□ 1.59
CPSF7-209ENST00000463244 TINF2Q9BSI4 451 aa24.98■■□□□ 1.59
CPSF7-209ENST00000463244 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.98■■□□□ 1.59
CPSF7-209ENST00000463244 BCL11AQ9H165 835 aa24.98■■□□□ 1.59
CPSF7-209ENST00000463244 XPNPEP3Q9NQH7 507 aa24.98■■□□□ 1.59
CPSF7-209ENST00000463244 FBXO28Q9NVF7 368 aa24.98■■□□□ 1.59
CPSF7-209ENST00000463244 ROBO3Q96MS0 1386 aa24.97■■□□□ 1.59
CPSF7-209ENST00000463244 RAB11FIP3O75154 756 aa24.97■■□□□ 1.59
CPSF7-209ENST00000463244 PGK2P07205 417 aa24.97■■□□□ 1.59
CPSF7-209ENST00000463244 RARBP10826 455 aa24.97■■□□□ 1.59
CPSF7-209ENST00000463244 TLE2Q04725 743 aa24.97■■□□□ 1.59
CPSF7-209ENST00000463244 CDX2Q99626 313 aaPredicted RBP24.97■■□□□ 1.59
CPSF7-209ENST00000463244 KANSL2Q9H9L4 492 aa24.97■■□□□ 1.59
CPSF7-209ENST00000463244 DIS3Q9Y2L1 958 aaKnown RBP24.97■■□□□ 1.59
CPSF7-209ENST00000463244 TTC28Q96AY4 2481 aa24.96■■□□□ 1.59
CPSF7-209ENST00000463244 ZBED9Q6R2W3 1325 aa24.96■■□□□ 1.59
CPSF7-209ENST00000463244 VWA5AO00534 786 aa24.96■■□□□ 1.59
CPSF7-209ENST00000463244 CHGBP05060 677 aa24.96■■□□□ 1.59
CPSF7-209ENST00000463244 MS4A1P11836 297 aa24.96■■□□□ 1.59
CPSF7-209ENST00000463244 STAT3P40763 770 aa24.96■■□□□ 1.59
CPSF7-209ENST00000463244 UBE3CQ15386 1083 aa24.96■■□□□ 1.59
CPSF7-209ENST00000463244 ZNF792Q3KQV3 632 aa24.96■■□□□ 1.59
CPSF7-209ENST00000463244 HAUS7Q99871 368 aa24.96■■□□□ 1.59
CPSF7-209ENST00000463244 SEMA6BQ9H3T3 888 aa24.96■■□□□ 1.59
CPSF7-209ENST00000463244 PPP1R9AQ9ULJ8 1098 aa24.96■■□□□ 1.59
CPSF7-209ENST00000463244 GREB1LQ9C091 1923 aaPredicted RBP24.96■■□□□ 1.59
CPSF7-209ENST00000463244 SMAD3P84022 425 aaKnown RBP24.95■■□□□ 1.58
CPSF7-209ENST00000463244 KCTD2Q14681 263 aa24.95■■□□□ 1.58
CPSF7-209ENST00000463244 RNF180Q86T96 592 aa24.95■■□□□ 1.58
CPSF7-209ENST00000463244 REPS2Q8NFH8 660 aa24.95■■□□□ 1.58
CPSF7-209ENST00000463244 DDRGK1Q96HY6 314 aa24.95■■□□□ 1.58
CPSF7-209ENST00000463244 GOPCQ9HD26 462 aa24.95■■□□□ 1.58
CPSF7-209ENST00000463244 ZBTB40Q9NUA8 1239 aa24.95■■□□□ 1.58
CPSF7-209ENST00000463244 ZNF214Q9UL59 606 aaPredicted RBP24.95■■□□□ 1.58
CPSF7-209ENST00000463244 TACC3Q9Y6A5 838 aa24.95■■□□□ 1.58
CPSF7-209ENST00000463244 MUC3AQ02505 3323 aa24.94■■□□□ 1.58
CPSF7-209ENST00000463244 PGK1P00558 417 aa24.94■■□□□ 1.58
CPSF7-209ENST00000463244 TAL1P17542 331 aaPredicted RBP24.94■■□□□ 1.58
CPSF7-209ENST00000463244 ITGB8P26012 769 aa24.94■■□□□ 1.58
CPSF7-209ENST00000463244 DDX19BQ9UMR2 479 aa24.94■■□□□ 1.58
CPSF7-209ENST00000463244 SLC4A4Q9Y6R1 1079 aa24.94■■□□□ 1.58
CPSF7-209ENST00000463244 CLTBP09497 229 aa24.93■■□□□ 1.58
CPSF7-209ENST00000463244 ZNF865P0CJ78 1059 aaPredicted RBP24.93■■□□□ 1.58
CPSF7-209ENST00000463244 COPB2P35606 906 aa24.93■■□□□ 1.58
CPSF7-209ENST00000463244 FAM83BQ5T0W9 1011 aa24.93■■□□□ 1.58
CPSF7-209ENST00000463244 CTR9Q6PD62 1173 aa24.93■■□□□ 1.58
CPSF7-209ENST00000463244 TTYH1Q9H313 450 aaPredicted RBP24.93■■□□□ 1.58
CPSF7-209ENST00000463244 A0A1W2PQ45 241 aaPredicted RBP24.92■■□□□ 1.58
CPSF7-209ENST00000463244 A0A1W2PQY0 241 aa24.92■■□□□ 1.58
CPSF7-209ENST00000463244 AKR1A1P14550 325 aa24.92■■□□□ 1.58
CPSF7-209ENST00000463244 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.92■■□□□ 1.58
CPSF7-209ENST00000463244 MAFAQ8NHW3 353 aaPredicted RBP24.91■■□□□ 1.58
CPSF7-209ENST00000463244 PUS7LQ9H0K6 701 aaKnown RBP24.91■■□□□ 1.58
CPSF7-209ENST00000463244 COG6Q9Y2V7 657 aa24.91■■□□□ 1.58
CPSF7-209ENST00000463244 KIAA0355O15063 1070 aa24.9■■□□□ 1.58
CPSF7-209ENST00000463244 RAD21O60216 631 aa24.9■■□□□ 1.58
CPSF7-209ENST00000463244 ADAMTS4O75173 837 aa24.9■■□□□ 1.58
CPSF7-209ENST00000463244 LENG1Q96BZ8 264 aaPredicted RBP24.9■■□□□ 1.58
CPSF7-209ENST00000463244 ARPP21Q9UBL0 812 aaPredicted RBP24.9■■□□□ 1.58
CPSF7-209ENST00000463244 CNPY2Q9Y2B0 182 aa24.9■■□□□ 1.58
CPSF7-209ENST00000463244 PQBP1O60828 265 aaKnown RBP24.89■■□□□ 1.58
CPSF7-209ENST00000463244 EPHB4P54760 987 aa24.89■■□□□ 1.58
CPSF7-209ENST00000463244 ZSCAN25Q6NSZ9 544 aa24.89■■□□□ 1.58
CPSF7-209ENST00000463244 MSL3Q8N5Y2 521 aaKnown RBP24.89■■□□□ 1.58
CPSF7-209ENST00000463244 MYLIPQ8WY64 445 aa24.89■■□□□ 1.58
CPSF7-209ENST00000463244 SLF1Q9BQI6 1058 aa24.89■■□□□ 1.58
CPSF7-209ENST00000463244 RAG1P15918 1043 aa24.88■■□□□ 1.57
CPSF7-209ENST00000463244 RNPC3Q96LT9 517 aaKnown RBP24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms