RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 BTBD7Q9P203 1132 aa10.54□□□□□ -0.72
LDB1-203ENST00000461873 M0R2C6 588 aa10.53□□□□□ -0.72
LDB1-203ENST00000461873 PRDM1O75626 825 aa10.53□□□□□ -0.72
LDB1-203ENST00000461873 TTLL1O95922 423 aa10.53□□□□□ -0.72
LDB1-203ENST00000461873 CHGBP05060 677 aa10.53□□□□□ -0.72
LDB1-203ENST00000461873 ADORA2AP29274 412 aa10.53□□□□□ -0.72
LDB1-203ENST00000461873 STAT3P40763 770 aa10.53□□□□□ -0.72
LDB1-203ENST00000461873 TRIM32Q13049 653 aa10.53□□□□□ -0.72
LDB1-203ENST00000461873 GRB14Q14449 540 aa10.53□□□□□ -0.72
LDB1-203ENST00000461873 FAM83BQ5T0W9 1011 aa10.53□□□□□ -0.72
LDB1-203ENST00000461873 CHRDL2Q6WN34 429 aa10.53□□□□□ -0.72
LDB1-203ENST00000461873 CLEC10AQ8IUN9 316 aa10.53□□□□□ -0.72
LDB1-203ENST00000461873 ATG4CQ96DT6 458 aa10.53□□□□□ -0.72
LDB1-203ENST00000461873 DDX11Q96FC9 970 aa10.53□□□□□ -0.72
LDB1-203ENST00000461873 SLF1Q9BQI6 1058 aa10.53□□□□□ -0.72
LDB1-203ENST00000461873 CRISPLD2Q9H0B8 497 aa10.53□□□□□ -0.72
LDB1-203ENST00000461873 NYAP2Q9P242 653 aa10.53□□□□□ -0.72
LDB1-203ENST00000461873 PRKAG2Q9UGJ0 569 aa10.53□□□□□ -0.72
LDB1-203ENST00000461873 KBTBD13C9JR72 458 aa10.52□□□□□ -0.73
LDB1-203ENST00000461873 F5H6K3 240 aa10.52□□□□□ -0.73
LDB1-203ENST00000461873 CNMDO75829 334 aa10.52□□□□□ -0.73
LDB1-203ENST00000461873 RASA1P20936 1047 aa10.52□□□□□ -0.73
LDB1-203ENST00000461873 TFAP4Q01664 338 aa10.52□□□□□ -0.73
LDB1-203ENST00000461873 KLRC3Q07444 240 aa10.52□□□□□ -0.73
LDB1-203ENST00000461873 PPARAQ07869 468 aa10.52□□□□□ -0.73
LDB1-203ENST00000461873 CCL14Q16627 93 aa10.52□□□□□ -0.73
LDB1-203ENST00000461873 C7orf61Q8IZ16 206 aa10.52□□□□□ -0.73
LDB1-203ENST00000461873 ABRAQ8N0Z2 381 aa10.52□□□□□ -0.73
LDB1-203ENST00000461873 PRPF38AQ8NAV1 312 aaKnown RBP10.52□□□□□ -0.73
LDB1-203ENST00000461873 ARRDC4Q8NCT1 418 aa10.52□□□□□ -0.73
LDB1-203ENST00000461873 PI4K2BQ8TCG2 481 aa10.52□□□□□ -0.73
LDB1-203ENST00000461873 LNPKQ9C0E8 428 aa10.52□□□□□ -0.73
LDB1-203ENST00000461873 HELLSQ9NRZ9 838 aa10.52□□□□□ -0.73
LDB1-203ENST00000461873 FEM1BQ9UK73 627 aa10.52□□□□□ -0.73
LDB1-203ENST00000461873 OGDHLQ9ULD0 1010 aa10.52□□□□□ -0.73
LDB1-203ENST00000461873 PPP1R9AQ9ULJ8 1098 aa10.52□□□□□ -0.73
LDB1-203ENST00000461873 COLQQ9Y215 455 aaPredicted RBP10.52□□□□□ -0.73
LDB1-203ENST00000461873 PLXNB2O15031 1838 aa10.51□□□□□ -0.73
LDB1-203ENST00000461873 RANBP6O60518 1105 aaKnown RBP10.51□□□□□ -0.73
LDB1-203ENST00000461873 HOXC6P09630 235 aa10.51□□□□□ -0.73
LDB1-203ENST00000461873 CCND3P30281 292 aaPredicted RBP10.51□□□□□ -0.73
LDB1-203ENST00000461873 PDE1AP54750 535 aa10.51□□□□□ -0.73
LDB1-203ENST00000461873 MCMDC2Q4G0Z9 681 aa10.51□□□□□ -0.73
LDB1-203ENST00000461873 ZMYM1Q5SVZ6 1142 aa10.51□□□□□ -0.73
LDB1-203ENST00000461873 OLFML2BQ68BL8 750 aa10.51□□□□□ -0.73
LDB1-203ENST00000461873 TICAM2Q86XR7 235 aa10.51□□□□□ -0.73
LDB1-203ENST00000461873 CPXCR1Q8N123 301 aa10.51□□□□□ -0.73
LDB1-203ENST00000461873 CHURC1Q8WUH1 139 aa10.51□□□□□ -0.73
LDB1-203ENST00000461873 USP6NLQ92738 828 aa10.51□□□□□ -0.73
LDB1-203ENST00000461873 KIFC2Q96AC6 838 aa10.51□□□□□ -0.73
LDB1-203ENST00000461873 TEX13BQ9BXU2 312 aa10.51□□□□□ -0.73
LDB1-203ENST00000461873 DDX20Q9UHI6 824 aaKnown RBP10.51□□□□□ -0.73
LDB1-203ENST00000461873 SYNPO2Q9UMS6 1093 aa10.51□□□□□ -0.73
LDB1-203ENST00000461873 STX8Q9UNK0 236 aa10.51□□□□□ -0.73
LDB1-203ENST00000461873 CNPY2Q9Y2B0 182 aa10.51□□□□□ -0.73
LDB1-203ENST00000461873 MYH4Q9Y623 1939 aa10.5□□□□□ -0.73
LDB1-203ENST00000461873 HIP1O00291 1037 aa10.5□□□□□ -0.73
LDB1-203ENST00000461873 VWA5AO00534 786 aa10.5□□□□□ -0.73
LDB1-203ENST00000461873 FDX1P10109 184 aa10.5□□□□□ -0.73
LDB1-203ENST00000461873 BMP3P12645 472 aa10.5□□□□□ -0.73
LDB1-203ENST00000461873 CYP2C19P33261 490 aa10.5□□□□□ -0.73
LDB1-203ENST00000461873 SLC1A4P43007 532 aa10.5□□□□□ -0.73
LDB1-203ENST00000461873 TMEM132BQ14DG7 1078 aa10.5□□□□□ -0.73
LDB1-203ENST00000461873 FAM47AQ5JRC9 791 aa10.5□□□□□ -0.73
LDB1-203ENST00000461873 RRP12Q5JTH9 1297 aaKnown RBP10.5□□□□□ -0.73
LDB1-203ENST00000461873 MAP3K21Q5TCX8 1036 aa10.5□□□□□ -0.73
LDB1-203ENST00000461873 SLFN13Q68D06 897 aa10.5□□□□□ -0.73
LDB1-203ENST00000461873 SNRNP48Q6IEG0 339 aaKnown RBP10.5□□□□□ -0.73
LDB1-203ENST00000461873 RIOX2Q8IUF8 465 aa10.5□□□□□ -0.73
LDB1-203ENST00000461873 ANKRD35Q8N283 1001 aa10.5□□□□□ -0.73
LDB1-203ENST00000461873 NPLOC4Q8TAT6 608 aa10.5□□□□□ -0.73
LDB1-203ENST00000461873 OTUD7AQ8TE49 926 aaPredicted RBP10.5□□□□□ -0.73
LDB1-203ENST00000461873 DIS3LQ8TF46 1054 aaKnown RBP10.5□□□□□ -0.73
LDB1-203ENST00000461873 CEP95Q96GE4 821 aa10.5□□□□□ -0.73
LDB1-203ENST00000461873 SEC62Q99442 399 aaKnown RBP10.5□□□□□ -0.73
LDB1-203ENST00000461873 SENP6Q9GZR1 1112 aaPredicted RBP10.5□□□□□ -0.73
LDB1-203ENST00000461873 DIAPH3Q9NSV4 1193 aa10.5□□□□□ -0.73
LDB1-203ENST00000461873 PCDH10Q9P2E7 1040 aa10.5□□□□□ -0.73
LDB1-203ENST00000461873 FBXO40Q9UH90 709 aa10.5□□□□□ -0.73
LDB1-203ENST00000461873 MTMR7Q9Y216 660 aa10.5□□□□□ -0.73
LDB1-203ENST00000461873 ROBO3Q96MS0 1386 aa10.5□□□□□ -0.73
LDB1-203ENST00000461873 NDUFB10O96000 172 aa10.49□□□□□ -0.73
LDB1-203ENST00000461873 RARBP10826 455 aa10.49□□□□□ -0.73
LDB1-203ENST00000461873 STAT2P52630 851 aa10.49□□□□□ -0.73
LDB1-203ENST00000461873 KIAA1755Q5JYT7 1200 aa10.49□□□□□ -0.73
LDB1-203ENST00000461873 CCDC129Q6ZRS4 1044 aa10.49□□□□□ -0.73
LDB1-203ENST00000461873 UBE2Q1Q7Z7E8 422 aa10.49□□□□□ -0.73
LDB1-203ENST00000461873 FAM160B2Q86V87 743 aa10.49□□□□□ -0.73
LDB1-203ENST00000461873 CHD1LQ86WJ1 897 aa10.49□□□□□ -0.73
LDB1-203ENST00000461873 SIAH1Q8IUQ4 282 aa10.49□□□□□ -0.73
LDB1-203ENST00000461873 LRRC47Q8N1G4 583 aaKnown RBP10.49□□□□□ -0.73
LDB1-203ENST00000461873 NEDD1Q8NHV4 660 aa10.49□□□□□ -0.73
LDB1-203ENST00000461873 LBHD1Q9BQE6 289 aaPredicted RBP10.49□□□□□ -0.73
LDB1-203ENST00000461873 EPB41L4AQ9HCS5 686 aaPredicted RBP10.49□□□□□ -0.73
LDB1-203ENST00000461873 FBXO28Q9NVF7 368 aa10.49□□□□□ -0.73
LDB1-203ENST00000461873 MTMR4Q9NYA4 1195 aa10.49□□□□□ -0.73
LDB1-203ENST00000461873 STAP2Q9UGK3 403 aa10.49□□□□□ -0.73
LDB1-203ENST00000461873 TMEM232C9JQI7 657 aa10.48□□□□□ -0.73
LDB1-203ENST00000461873 SMIM22K7EJ46 135 aa10.48□□□□□ -0.73
LDB1-203ENST00000461873 DNM1LO00429 736 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms