RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 TRAPPC3LQ5T215 181 aa10.33□□□□□ -0.76
ECHDC1-212ENST00000461239 LRP10Q7Z4F1 713 aa10.33□□□□□ -0.76
ECHDC1-212ENST00000461239 WDR63Q8IWG1 891 aa10.33□□□□□ -0.76
ECHDC1-212ENST00000461239 TSPYL6Q8N831 410 aa10.33□□□□□ -0.76
ECHDC1-212ENST00000461239 C8orf58Q8NAV2 365 aa10.33□□□□□ -0.76
ECHDC1-212ENST00000461239 PHC3Q8NDX5 983 aa10.33□□□□□ -0.76
ECHDC1-212ENST00000461239 RASGRP4Q8TDF6 673 aa10.33□□□□□ -0.76
ECHDC1-212ENST00000461239 TSR2Q969E8 191 aaKnown RBP10.33□□□□□ -0.76
ECHDC1-212ENST00000461239 SPON2Q9BUD6 331 aa10.33□□□□□ -0.76
ECHDC1-212ENST00000461239 MTFR1LQ9H019 292 aa10.33□□□□□ -0.76
ECHDC1-212ENST00000461239 MUC3BQ9H195 1237 aa10.33□□□□□ -0.76
ECHDC1-212ENST00000461239 KCNQ5Q9NR82 932 aa10.33□□□□□ -0.76
ECHDC1-212ENST00000461239 SRP68Q9UHB9 627 aaKnown RBP10.33□□□□□ -0.76
ECHDC1-212ENST00000461239 SLC6A14Q9UN76 642 aa10.33□□□□□ -0.76
ECHDC1-212ENST00000461239 IL16Q14005 1332 aa10.33□□□□□ -0.76
ECHDC1-212ENST00000461239 FGRP09769 529 aa10.32□□□□□ -0.76
ECHDC1-212ENST00000461239 GYS1P13807 737 aa10.32□□□□□ -0.76
ECHDC1-212ENST00000461239 ATP2B1P20020 1258 aa10.32□□□□□ -0.76
ECHDC1-212ENST00000461239 MX2P20592 715 aa10.32□□□□□ -0.76
ECHDC1-212ENST00000461239 HMGB2P26583 209 aaKnown RBP10.32□□□□□ -0.76
ECHDC1-212ENST00000461239 GBP2P32456 591 aaPredicted RBP10.32□□□□□ -0.76
ECHDC1-212ENST00000461239 LIG3P49916 1009 aa10.32□□□□□ -0.76
ECHDC1-212ENST00000461239 MSL1Q68DK7 614 aa10.32□□□□□ -0.76
ECHDC1-212ENST00000461239 KIAA0825Q8IV33 1275 aa10.32□□□□□ -0.76
ECHDC1-212ENST00000461239 FLAD1Q8NFF5 587 aa10.32□□□□□ -0.76
ECHDC1-212ENST00000461239 SLC16A10Q8TF71 515 aa10.32□□□□□ -0.76
ECHDC1-212ENST00000461239 ARMC5Q96C12 935 aa10.32□□□□□ -0.76
ECHDC1-212ENST00000461239 GOLGB1Q14789 3259 aaKnown RBP10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 COL15A1P39059 1388 aa10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 C4AP0C0L4 1744 aa10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 MINDY4BA8MYZ0 360 aa10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 ARAFP10398 606 aa10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 CPB1P15086 417 aa10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 ATF4P18848 351 aaPredicted RBP10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 GARTP22102 1010 aa10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 EIF4A3P38919 411 aaKnown RBP10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 IL6STP40189 918 aaPredicted RBP10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 CALD1Q05682 793 aaKnown RBP10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 PROSER3Q2NL68 480 aa10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 PERM1Q5SV97 790 aa10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 DUSP27Q5VZP5 1158 aa10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 CEP135Q66GS9 1140 aa10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 FAM35AQ86V20 835 aa10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 MCF2L2Q86YR7 1114 aa10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 DHX38Q92620 1227 aaKnown RBP10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 PLD4Q96BZ4 506 aa10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 RBSNQ9H1K0 784 aa10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 SPON1Q9HCB6 807 aa10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 USP42Q9H9J4 1324 aaKnown RBP10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 FANCIQ9NVI1 1328 aa10.31□□□□□ -0.76
ECHDC1-212ENST00000461239 LRP5O75197 1615 aa10.3□□□□□ -0.76
ECHDC1-212ENST00000461239 LAMB4A4D0S4 1761 aa10.3□□□□□ -0.76
ECHDC1-212ENST00000461239 ADARB2-AS1A8MUL3 147 aa10.3□□□□□ -0.76
ECHDC1-212ENST00000461239 ELL2O00472 640 aaPredicted RBP10.3□□□□□ -0.76
ECHDC1-212ENST00000461239 PAGE1O75459 146 aa10.3□□□□□ -0.76
ECHDC1-212ENST00000461239 SMNDC1O75940 238 aaKnown RBP eCLIP10.3□□□□□ -0.76
ECHDC1-212ENST00000461239 ANXA1P04083 346 aa10.3□□□□□ -0.76
ECHDC1-212ENST00000461239 ADH7P40394 386 aa10.3□□□□□ -0.76
ECHDC1-212ENST00000461239 NGEFQ8N5V2 710 aa10.3□□□□□ -0.76
ECHDC1-212ENST00000461239 BSNDQ8WZ55 320 aa10.3□□□□□ -0.76
ECHDC1-212ENST00000461239 SOX13Q9UN79 622 aa10.3□□□□□ -0.76
ECHDC1-212ENST00000461239 TLR6Q9Y2C9 796 aa10.3□□□□□ -0.76
ECHDC1-212ENST00000461239 UTRNP46939 3433 aa10.29□□□□□ -0.76
ECHDC1-212ENST00000461239 CAMTA2O94983 1202 aa10.29□□□□□ -0.76
ECHDC1-212ENST00000461239 EIF2S2P20042 333 aaKnown RBP10.29□□□□□ -0.76
ECHDC1-212ENST00000461239 ADH6P28332 368 aa10.29□□□□□ -0.76
ECHDC1-212ENST00000461239 RFC4P35249 363 aa10.29□□□□□ -0.76
ECHDC1-212ENST00000461239 FBXL19Q6PCT2 694 aa10.29□□□□□ -0.76
ECHDC1-212ENST00000461239 FCHSD1Q86WN1 690 aa10.29□□□□□ -0.76
ECHDC1-212ENST00000461239 VPS37DQ86XT2 251 aa10.29□□□□□ -0.76
ECHDC1-212ENST00000461239 ZNF296Q8WUU4 475 aaPredicted RBP10.29□□□□□ -0.76
ECHDC1-212ENST00000461239 EAF1Q96JC9 268 aaPredicted RBP10.29□□□□□ -0.76
ECHDC1-212ENST00000461239 DNAJC2Q99543 621 aaKnown RBP10.29□□□□□ -0.76
ECHDC1-212ENST00000461239 LPIN3Q9BQK8 851 aa10.29□□□□□ -0.76
ECHDC1-212ENST00000461239 CLEC4MQ9H2X3 399 aaPredicted RBP10.29□□□□□ -0.76
ECHDC1-212ENST00000461239 NARFQ9UHQ1 456 aa10.29□□□□□ -0.76
ECHDC1-212ENST00000461239 HOXB7P09629 217 aa10.28□□□□□ -0.76
ECHDC1-212ENST00000461239 TM4SF1P30408 202 aa10.28□□□□□ -0.76
ECHDC1-212ENST00000461239 GTF2F1P35269 517 aaKnown RBP eCLIP10.28□□□□□ -0.76
ECHDC1-212ENST00000461239 TTBK2Q6IQ55 1244 aa10.28□□□□□ -0.76
ECHDC1-212ENST00000461239 AGMOQ6ZNB7 445 aa10.28□□□□□ -0.76
ECHDC1-212ENST00000461239 TTLL7Q6ZT98 887 aa10.28□□□□□ -0.76
ECHDC1-212ENST00000461239 VN1R5Q7Z5H4 357 aa10.28□□□□□ -0.76
ECHDC1-212ENST00000461239 TRMT2AQ8IZ69 625 aaKnown RBP10.28□□□□□ -0.76
ECHDC1-212ENST00000461239 GPR161Q8N6U8 529 aaKnown RBP10.28□□□□□ -0.76
ECHDC1-212ENST00000461239 GPN3Q9UHW5 284 aaPredicted RBP10.28□□□□□ -0.76
ECHDC1-212ENST00000461239 GREM1O60565 184 aa10.27□□□□□ -0.77
ECHDC1-212ENST00000461239 VAMP4O75379 141 aa10.27□□□□□ -0.77
ECHDC1-212ENST00000461239 PF4P02776 101 aa10.27□□□□□ -0.77
ECHDC1-212ENST00000461239 MYL6BP14649 208 aa10.27□□□□□ -0.77
ECHDC1-212ENST00000461239 RPS26P62854 115 aaKnown RBP10.27□□□□□ -0.77
ECHDC1-212ENST00000461239 EXOSC9Q06265 439 aaKnown RBP10.27□□□□□ -0.77
ECHDC1-212ENST00000461239 DDR1Q08345 913 aa10.27□□□□□ -0.77
ECHDC1-212ENST00000461239 SLFN5Q08AF3 891 aa10.27□□□□□ -0.77
ECHDC1-212ENST00000461239 HLFQ16534 295 aa10.27□□□□□ -0.77
ECHDC1-212ENST00000461239 ADAM19Q9H013 955 aa10.27□□□□□ -0.77
ECHDC1-212ENST00000461239 SMG9Q9H0W8 520 aaKnown RBP10.27□□□□□ -0.77
ECHDC1-212ENST00000461239 TMEM39AQ9NV64 488 aa10.27□□□□□ -0.77
ECHDC1-212ENST00000461239 FRRS1LQ9P0K9 344 aa10.27□□□□□ -0.77
ECHDC1-212ENST00000461239 CHPF2Q9P2E5 772 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms