RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 VPS53Q5VIR6 699 aa8.77□□□□□ -1.01
RTN4-212ENST00000461004 CCDC84Q86UT8 332 aaPredicted RBP8.77□□□□□ -1.01
RTN4-212ENST00000461004 RASAL3Q86YV0 1011 aa8.77□□□□□ -1.01
RTN4-212ENST00000461004 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.77□□□□□ -1.01
RTN4-212ENST00000461004 ADAM32Q8TC27 787 aa8.77□□□□□ -1.01
RTN4-212ENST00000461004 AIDAQ96BJ3 306 aa8.77□□□□□ -1.01
RTN4-212ENST00000461004 WRNIP1Q96S55 665 aa8.77□□□□□ -1.01
RTN4-212ENST00000461004 CRNKL1Q9BZJ0 848 aaKnown RBP8.77□□□□□ -1.01
RTN4-212ENST00000461004 IL25Q9H293 177 aa8.77□□□□□ -1.01
RTN4-212ENST00000461004 DNAJC18Q9H819 358 aa8.77□□□□□ -1.01
RTN4-212ENST00000461004 ELP3Q9H9T3 547 aa8.77□□□□□ -1.01
RTN4-212ENST00000461004 DCP1AQ9NPI6 582 aaPredicted RBP8.77□□□□□ -1.01
RTN4-212ENST00000461004 ZNF112Q9UJU3 913 aa8.77□□□□□ -1.01
RTN4-212ENST00000461004 GPSM3Q9Y4H4 160 aa8.77□□□□□ -1.01
RTN4-212ENST00000461004 SLC4A4Q9Y6R1 1079 aa8.77□□□□□ -1.01
RTN4-212ENST00000461004 AK9Q5TCS8 1911 aa8.77□□□□□ -1.01
RTN4-212ENST00000461004 WDR33Q9C0J8 1336 aaKnown RBP8.77□□□□□ -1.01
RTN4-212ENST00000461004 CDK5RAP2Q96SN8 1893 aa8.77□□□□□ -1.01
RTN4-212ENST00000461004 PAPPA2Q9BXP8 1791 aa8.76□□□□□ -1.01
RTN4-212ENST00000461004 MYH7P12883 1935 aa8.76□□□□□ -1.01
RTN4-212ENST00000461004 RPAP1Q9BWH6 1393 aaPredicted RBP8.76□□□□□ -1.01
RTN4-212ENST00000461004 ZFYP08048 801 aaPredicted RBP8.76□□□□□ -1.01
RTN4-212ENST00000461004 MAP3K10Q02779 954 aa8.76□□□□□ -1.01
RTN4-212ENST00000461004 SPRYD7Q5W111 196 aa8.76□□□□□ -1.01
RTN4-212ENST00000461004 ZNF589Q86UQ0 364 aaPredicted RBP8.76□□□□□ -1.01
RTN4-212ENST00000461004 STK11IPQ8N1F8 1099 aa8.76□□□□□ -1.01
RTN4-212ENST00000461004 SLC44A5Q8NCS7 719 aa8.76□□□□□ -1.01
RTN4-212ENST00000461004 DYNLL2Q96FJ2 89 aa8.76□□□□□ -1.01
RTN4-212ENST00000461004 ARHGAP9Q9BRR9 750 aa8.76□□□□□ -1.01
RTN4-212ENST00000461004 C1QTNF2Q9BXJ5 285 aa8.76□□□□□ -1.01
RTN4-212ENST00000461004 ZNF341Q9BYN7 854 aa8.76□□□□□ -1.01
RTN4-212ENST00000461004 PRKD2Q9BZL6 878 aa8.76□□□□□ -1.01
RTN4-212ENST00000461004 ALG2Q9H553 416 aa8.76□□□□□ -1.01
RTN4-212ENST00000461004 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.76□□□□□ -1.01
RTN4-212ENST00000461004 EPB41L4AQ9HCS5 686 aaPredicted RBP8.76□□□□□ -1.01
RTN4-212ENST00000461004 MCM9Q9NXL9 1143 aa8.76□□□□□ -1.01
RTN4-212ENST00000461004 SNCAIPQ9Y6H5 919 aa8.76□□□□□ -1.01
RTN4-212ENST00000461004 SIPA1L1O43166 1804 aa8.75□□□□□ -1.01
RTN4-212ENST00000461004 USP17L12C9JPN9 530 aa8.75□□□□□ -1.01
RTN4-212ENST00000461004 USP17L21D6R901 530 aa8.75□□□□□ -1.01
RTN4-212ENST00000461004 IREB2P48200 963 aaKnown RBP8.75□□□□□ -1.01
RTN4-212ENST00000461004 WNT7BP56706 349 aa8.75□□□□□ -1.01
RTN4-212ENST00000461004 KIF23Q02241 960 aaPredicted RBP8.75□□□□□ -1.01
RTN4-212ENST00000461004 ERICH6BQ5W0A0 696 aa8.75□□□□□ -1.01
RTN4-212ENST00000461004 DCAF15Q66K64 600 aa8.75□□□□□ -1.01
RTN4-212ENST00000461004 CTR9Q6PD62 1173 aa8.75□□□□□ -1.01
RTN4-212ENST00000461004 TMED8Q6PL24 325 aaPredicted RBP8.75□□□□□ -1.01
RTN4-212ENST00000461004 SLC10A4Q96EP9 437 aa8.75□□□□□ -1.01
RTN4-212ENST00000461004 HHIPL1Q96JK4 782 aa8.75□□□□□ -1.01
RTN4-212ENST00000461004 PI4KBQ9UBF8 816 aa8.75□□□□□ -1.01
RTN4-212ENST00000461004 CEP350Q5VT06 3117 aa8.75□□□□□ -1.01
RTN4-212ENST00000461004 PATL2C9JE40 543 aaKnown RBP8.74□□□□□ -1.01
RTN4-212ENST00000461004 GDF11O95390 407 aa8.74□□□□□ -1.01
RTN4-212ENST00000461004 CD2BP2O95400 341 aaKnown RBP8.74□□□□□ -1.01
RTN4-212ENST00000461004 APPP05067 770 aa8.74□□□□□ -1.01
RTN4-212ENST00000461004 POLR3DP05423 398 aaPredicted RBP8.74□□□□□ -1.01
RTN4-212ENST00000461004 GABPAQ06546 454 aa8.74□□□□□ -1.01
RTN4-212ENST00000461004 MCMDC2Q4G0Z9 681 aa8.74□□□□□ -1.01
RTN4-212ENST00000461004 CWC27Q6UX04 472 aaKnown RBP8.74□□□□□ -1.01
RTN4-212ENST00000461004 METTL16Q86W50 562 aaKnown RBP8.74□□□□□ -1.01
RTN4-212ENST00000461004 BPHLQ86WA6 291 aaPredicted RBP8.74□□□□□ -1.01
RTN4-212ENST00000461004 FOXP4Q8IVH2 680 aaPredicted RBP8.74□□□□□ -1.01
RTN4-212ENST00000461004 ANKRD13AQ8IZ07 590 aa8.74□□□□□ -1.01
RTN4-212ENST00000461004 IFNL3Q8IZI9 196 aa8.74□□□□□ -1.01
RTN4-212ENST00000461004 GLMNQ92990 594 aa8.74□□□□□ -1.01
RTN4-212ENST00000461004 OPTNQ96CV9 577 aa8.74□□□□□ -1.01
RTN4-212ENST00000461004 WNK4Q96J92 1243 aa8.74□□□□□ -1.01
RTN4-212ENST00000461004 INCENPQ9NQS7 918 aa8.74□□□□□ -1.01
RTN4-212ENST00000461004 HELLSQ9NRZ9 838 aa8.74□□□□□ -1.01
RTN4-212ENST00000461004 TACC3Q9Y6A5 838 aa8.74□□□□□ -1.01
RTN4-212ENST00000461004 OTOFQ9HC10 1997 aa8.73□□□□□ -1.01
RTN4-212ENST00000461004 FOCADQ5VW36 1801 aa8.73□□□□□ -1.01
RTN4-212ENST00000461004 COL2A1P02458 1487 aaPredicted RBP8.73□□□□□ -1.01
RTN4-212ENST00000461004 MINDY4BA8MYZ0 360 aa8.73□□□□□ -1.01
RTN4-212ENST00000461004 HLA-DOAP06340 250 aa8.73□□□□□ -1.01
RTN4-212ENST00000461004 CHMLP26374 656 aa8.73□□□□□ -1.01
RTN4-212ENST00000461004 SHMT1P34896 483 aa8.73□□□□□ -1.01
RTN4-212ENST00000461004 ECE1P42892 770 aa8.73□□□□□ -1.01
RTN4-212ENST00000461004 DGKZQ13574 1117 aa8.73□□□□□ -1.01
RTN4-212ENST00000461004 AGERQ15109 404 aa8.73□□□□□ -1.01
RTN4-212ENST00000461004 LRRFIP1Q32MZ4 808 aaKnown RBP8.73□□□□□ -1.01
RTN4-212ENST00000461004 C12orf60Q5U649 245 aa8.73□□□□□ -1.01
RTN4-212ENST00000461004 CERS3Q8IU89 383 aa8.73□□□□□ -1.01
RTN4-212ENST00000461004 JMYQ8N9B5 988 aa8.73□□□□□ -1.01
RTN4-212ENST00000461004 HOOK2Q96ED9 719 aa8.73□□□□□ -1.01
RTN4-212ENST00000461004 DHX36Q9H2U1 1008 aaKnown RBP8.73□□□□□ -1.01
RTN4-212ENST00000461004 ATP8A2Q9NTI2 1148 aa8.73□□□□□ -1.01
RTN4-212ENST00000461004 MYH1P12882 1939 aa8.73□□□□□ -1.01
RTN4-212ENST00000461004 BAZ2AQ9UIF9 1905 aaKnown RBP8.73□□□□□ -1.01
RTN4-212ENST00000461004 HSPD1P10809 573 aaKnown RBP8.72□□□□□ -1.01
RTN4-212ENST00000461004 CAP2P40123 477 aa8.72□□□□□ -1.01
RTN4-212ENST00000461004 NOL9Q5SY16 702 aaKnown RBP8.72□□□□□ -1.01
RTN4-212ENST00000461004 TTC6Q86TZ1 520 aa8.72□□□□□ -1.01
RTN4-212ENST00000461004 SCYL3Q8IZE3 742 aa8.72□□□□□ -1.01
RTN4-212ENST00000461004 CRACR2BQ8N4Y2 399 aaPredicted RBP8.72□□□□□ -1.01
RTN4-212ENST00000461004 PTPN18Q99952 460 aa8.72□□□□□ -1.01
RTN4-212ENST00000461004 DIAPH3Q9NSV4 1193 aa8.72□□□□□ -1.01
RTN4-212ENST00000461004 PKD2L1Q9P0L9 805 aa8.72□□□□□ -1.01
RTN4-212ENST00000461004 HERC5Q9UII4 1024 aaKnown RBP8.72□□□□□ -1.01
RTN4-212ENST00000461004 SERPINB13Q9UIV8 391 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms